Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 4 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus typed the way the ontology types it
altLabel 2 chebi_altlabels, consensus_match group_key=trimagnesiumdicitrate||dimension=Environmental > media=Water > water_body=Unknown; cas=3344-18-1; added Common Chemistry CAS names as altLabel: 1,2,3-Propanetricarboxylic acid, 2-hydroxy-, magnesium salt (2:3), Citramag, Citric acid, magnesium salt (2:3), Hexaaquomagnesium bis[(citrato)aquomagnesate]; object_uuid=fo-c3f392cfedfd1fd4
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=trimagnesiumdicitrate||dimension=Environmental > media=Water > water_body=Unknown; group_sources=['chebi', 'ec_inventory']; cas_sources={'3344-18-1': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-c3f392cfedfd1fd4: {'3344-18-1': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['3344-18-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_131391']; candidate_pubchem_cids=[3693607, 6099959, 6335619, 10242446, 20835962, 53249332, 121233732]; selected_pubchem_cids=[6099959]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

18
# Step Field From To Why
4,807 bootstrap_labels prefLabel [{"@value":"trimagnesium dicitrate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttrib… Bootstrapped prefLabel from legacy name field
4,808 bootstrap_labels name trimagnesium dicitrate Purged legacy name field to enforce prefLabel usage
4,809 bootstrap_labels synonyms ["trimagnesiumdicitrate","trimagnesiumcitrate","trimagnesium(2+)ionbis(2-hydroxypropane-1,2,3-tricarboxylate)","trimagn… [] Removed legacy synonyms field in favor of structured labels
164,566 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Ocean"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
164,567 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-ocea Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
214,945 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
222,200 normalize_name_case prefLabel [{"@value":"trimagnesium dicitrate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttrib… [{"@value":"Trimagnesium Dicitrate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttrib… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
231,802 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["2C6H5O7.3M… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
231,803 enrich_references skos_definition [{"@value":"A magnesium salt composed of magnesium and citrate ions in a 3:2 ratio.","@language":"en","provenance":{"pr… Merged ChEBI/PubChem definitions into skos:definition
231,804 enrich_references references [] [{"@id":"https://chem.echa.europa.eu/100.020.086","provenance":{"prov:wasGeneratedBy":"enrich_references.pubchem_identi… Added references with provenance; cas_numbers=['3344-18-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_131391']; candidate_pubchem_cids=[3693607, 6099959, 6335619, 10242446, 20835962, 53249332, 121233732]; selected_pubchem_cids=[6099959]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
254,988 chebi_altlabels altLabel [] [{"@value":"Magnesium citrate","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo… Added 4 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
272,967 consensus_match altLabel [{"@value":"Magnesium citrate","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo… [{"@value":"Magnesium citrate","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo… group_key=trimagnesiumdicitrate||dimension=Environmental > media=Water > water_body=Unknown; cas=3344-18-1; added Common Chemistry CAS names as altLabel: 1,2,3-Propanetricarboxylic acid, 2-hydroxy-, magnesium salt (2:3), Citramag, Citric acid, magnesium salt (2:3), Hexaaquomagnesium bis[(citrato)aquomagnesate]; object_uuid=fo-c3f392cfedfd1fd4
272,968 consensus_match cas_match_labels {"3344-18-1":"exactMatch"} group_key=trimagnesiumdicitrate||dimension=Environmental > media=Water > water_body=Unknown; group_sources=['chebi', 'ec_inventory']; cas_sources={'3344-18-1': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-c3f392cfedfd1fd4: {'3344-18-1': 'exactMatch'}
274,776 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["2C6H5O7.3M… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["2C6H5O7.3M… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Trimagnesium Dicitrate'
281,246 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["2C6H5O7.3M… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["2C6H5O7.3M… rdkit_post_consensus from 'O=C([O-])CC(O)(CC(=O)[O-])C(=O)[O-].O=C([O-])CC(O)(CC(=O)[O-])C(=O)[O-].[Mg+2].[Mg+2].[Mg+2]'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
363,309 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/c1be01e4-e423-… associations resolved on the elementary layer
389,087 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["2C6H5O7.3M… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["2C6H5O7.3M… typed the way the ontology types it
396,093 link_flows_to_their_substance types ["https://w3id.org/chemrof/ChemicalSalt"] the substance's answer, copied onto its flow

PROV-O trail

18 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T1302361922970000/4807 prefLabel ef:agent/bootstrap_labels ef:flow/c1be01e4-e423-43a9-a671-c56cf14d33ed/v0 ef:flow/c1be01e4-e423-43a9-a671-c56cf14d33ed/v1
ef:activity/change/20260821T1302361922970000/4808 name ef:agent/bootstrap_labels ef:flow/c1be01e4-e423-43a9-a671-c56cf14d33ed/v1 ef:flow/c1be01e4-e423-43a9-a671-c56cf14d33ed/v2
ef:activity/change/20260821T1302361922970000/4809 synonyms ef:agent/bootstrap_labels ef:flow/c1be01e4-e423-43a9-a671-c56cf14d33ed/v2 ef:flow/c1be01e4-e423-43a9-a671-c56cf14d33ed/v3
ef:activity/change/20260821T1302361922970000/164566 context ef:agent/default_context_mapping ef:flow/c1be01e4-e423-43a9-a671-c56cf14d33ed/v3 ef:flow/c1be01e4-e423-43a9-a671-c56cf14d33ed/v4
ef:activity/change/20260821T1302361922970000/164567 context_iri ef:agent/default_context_mapping ef:flow/c1be01e4-e423-43a9-a671-c56cf14d33ed/v4 ef:flow/c1be01e4-e423-43a9-a671-c56cf14d33ed/v5
ef:activity/change/20260821T1302361922970000/214945 unit_iri ef:agent/unit_normalization ef:flow/c1be01e4-e423-43a9-a671-c56cf14d33ed/v5 ef:flow/c1be01e4-e423-43a9-a671-c56cf14d33ed/v6
ef:activity/change/20260821T1302361922970000/222200 prefLabel ef:agent/normalize_name_case ef:flow/c1be01e4-e423-43a9-a671-c56cf14d33ed/v6 ef:flow/c1be01e4-e423-43a9-a671-c56cf14d33ed/v7
ef:activity/change/20260821T1302361922970000/231802 properties ef:agent/enrich_references ef:flow/c1be01e4-e423-43a9-a671-c56cf14d33ed/v7 ef:flow/c1be01e4-e423-43a9-a671-c56cf14d33ed/v8
ef:activity/change/20260821T1302361922970000/231803 skos_definition ef:agent/enrich_references ef:flow/c1be01e4-e423-43a9-a671-c56cf14d33ed/v8 ef:flow/c1be01e4-e423-43a9-a671-c56cf14d33ed/v9
ef:activity/change/20260821T1302361922970000/231804 references ef:agent/enrich_references ef:flow/c1be01e4-e423-43a9-a671-c56cf14d33ed/v9 ef:flow/c1be01e4-e423-43a9-a671-c56cf14d33ed/v10
ef:activity/change/20260821T1302361922970000/254988 altLabel ef:agent/chebi_altlabels ef:flow/c1be01e4-e423-43a9-a671-c56cf14d33ed/v10 ef:flow/c1be01e4-e423-43a9-a671-c56cf14d33ed/v11
ef:activity/change/20260821T1302361922970000/272967 altLabel ef:agent/consensus_match ef:flow/c1be01e4-e423-43a9-a671-c56cf14d33ed/v11 ef:flow/c1be01e4-e423-43a9-a671-c56cf14d33ed/v12
ef:activity/change/20260821T1302361922970000/272968 cas_match_labels ef:agent/consensus_match ef:flow/c1be01e4-e423-43a9-a671-c56cf14d33ed/v12 ef:flow/c1be01e4-e423-43a9-a671-c56cf14d33ed/v13
ef:activity/change/20260821T1302361922970000/274776 properties ef:agent/opsin_iupac ef:flow/c1be01e4-e423-43a9-a671-c56cf14d33ed/v13 ef:flow/c1be01e4-e423-43a9-a671-c56cf14d33ed/v14
ef:activity/change/20260821T1302361922970000/281246 properties ef:agent/rdkit_post_consensus ef:flow/c1be01e4-e423-43a9-a671-c56cf14d33ed/v14 ef:flow/c1be01e4-e423-43a9-a671-c56cf14d33ed/v15
ef:activity/change/20260821T1302361922970000/363309 concept_associations ef:agent/carry_associations_onto_flows ef:flow/c1be01e4-e423-43a9-a671-c56cf14d33ed/v15 ef:flow/c1be01e4-e423-43a9-a671-c56cf14d33ed/v16
ef:activity/change/20260821T1302361922970000/389087 properties ef:agent/normalise_property_values ef:flow/c1be01e4-e423-43a9-a671-c56cf14d33ed/v16 ef:flow/c1be01e4-e423-43a9-a671-c56cf14d33ed/v17
ef:activity/change/20260821T1302361922970000/396093 types ef:agent/link_flows_to_their_substance ef:flow/c1be01e4-e423-43a9-a671-c56cf14d33ed/v17 ef:flow/c1be01e4-e423-43a9-a671-c56cf14d33ed/v18

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