Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 4 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 4 catalogue altLabel value(s): 'APF 140' (grade code), 'NSC 97066' (registry code), 'PP 5' (grade code), 'PP 6' (grade code)
prefLabel 2 bootstrap_labels, consensus_match cas=306-94-5; cc_chebi_agreed_name='Perfluorodecalin'; object_uuid=fo-c3f26f898c51c72b
cas_match_labels 1 consensus_match group_key=pfc-9-1-18||dimension=Environmental > media=Water > water_body=Surface water; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'306-94-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-c3f26f898c51c72b: {'306-94-5': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
ec_numbers 1 ec_cross_check Resolved from EC-inventory: 206-192-4 from CAS 306-94-5
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['306-94-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_38848']; candidate_pubchem_cids=[9386, 278904]; selected_pubchem_cids=[9386]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

21
# Step Field From To Why
10,782 bootstrap_labels prefLabel [{"@value":"PFC-9-1-18","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… Bootstrapped prefLabel from legacy name field
10,783 bootstrap_labels name PFC-9-1-18 Purged legacy name field to enforce prefLabel usage
164,704 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Non-agricultural"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
164,705 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-noag Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
216,914 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
226,925 ec_cross_check ec_numbers [] ["206-192-4"] Resolved from EC-inventory: 206-192-4 from CAS 306-94-5
237,445 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10F18"],"… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
237,446 enrich_references skos_definition [{"@value":"A fluorocarbon that is decalin in which every hydrogen is replaced by fluorine. Capable of dissolving large… Merged ChEBI/PubChem definitions into skos:definition
237,447 enrich_references references [] [{"@id":"beilstein:2067113","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":… Added references with provenance; cas_numbers=['306-94-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_38848']; candidate_pubchem_cids=[9386, 278904]; selected_pubchem_cids=[9386]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
251,262 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10F18"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10F18"],"… rdkit_pre_consensus from 'C12(C(C(C(C(C1(F)F)(F)F)(F)F)(F)F)(C(C(C(C2(F)F)(F)F)(F)F)(F)F)F)F'; added: monoisotopic_mass
255,898 chebi_altlabels altLabel [] [{"@value":"1,1,2,2,3,3,4,4,4a,5,5,6,6,7,7,8,8,8a-octadecafluorodecahydronaphthalene","@language":"en","source":{"prov:… Added 7 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
270,565 consensus_match prefLabel [{"@value":"PFC-9-1-18","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… [{"@value":"Perfluorodecalin","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo"… cas=306-94-5; cc_chebi_agreed_name='Perfluorodecalin'; object_uuid=fo-c3f26f898c51c72b
270,566 consensus_match altLabel [{"@value":"1,1,2,2,3,3,4,4,4a,5,5,6,6,7,7,8,8,8a-octadecafluorodecahydronaphthalene","@language":"en","source":{"prov:… [{"@value":"1,1,2,2,3,3,4,4,4a,5,5,6,6,7,7,8,8,8a-octadecafluorodecahydronaphthalene","@language":"en","source":{"prov:… cas=306-94-5; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-c3f26f898c51c72b
270,567 consensus_match altLabel [{"@value":"1,1,2,2,3,3,4,4,4a,5,5,6,6,7,7,8,8,8a-octadecafluorodecahydronaphthalene","@language":"en","source":{"prov:… [{"@value":"1,1,2,2,3,3,4,4,4a,5,5,6,6,7,7,8,8,8a-octadecafluorodecahydronaphthalene","@language":"en","source":{"prov:… group_key=pfc-9-1-18||dimension=Environmental > media=Water > water_body=Surface water; cas=306-94-5; added Common Chemistry CAS names as altLabel: 1,1,2,2,3,3,4,4,4a,5,5,6,6,7,7,8,8,8a-Octadecafluoronaphthalene, APF 140, Decalin perfluoride, Flutec PP 5, Flutec PP 6, Flutec PP 7, NSC 97066, Naphthalene, 1,1,2,2,3,3,4,4,4a,5,5,6,6,7,7,8,8,8a-octadecafluorodecahydro-, Naphthalene, octadecafluorodecahydro-, Octadecafluorodecalin, PP 5, PP 6, Perfluorodecahydronaphthalene; object_uuid=fo-c3f26f898c51c72b
270,568 consensus_match cas_match_labels {"306-94-5":"exactMatch"} group_key=pfc-9-1-18||dimension=Environmental > media=Water > water_body=Surface water; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'306-94-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-c3f26f898c51c72b: {'306-94-5': 'exactMatch'}
276,446 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10F18"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10F18"],"… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Perfluorodecalin'
283,052 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10F18"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10F18"],"… rdkit_post_consensus from 'FC1(F)C(F)(F)C(F)(F)C2(F)C(F)(F)C(F)(F)C(F)(F)C(F)(F)C2(F)C1(F)F'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
289,496 strip_catalogue_altlabels altLabel [{"@value":"1,1,2,2,3,3,4,4,4a,5,5,6,6,7,7,8,8,8a-octadecafluorodecahydronaphthalene","@language":"en","source":{"prov:… [{"@value":"1,1,2,2,3,3,4,4,4a,5,5,6,6,7,7,8,8,8a-octadecafluorodecahydronaphthalene","@language":"en","source":{"prov:… Removed 4 catalogue altLabel value(s): 'APF 140' (grade code), 'NSC 97066' (registry code), 'PP 5' (grade code), 'PP 6' (grade code)
363,378 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/c207d7bf-9abc-… associations resolved on the elementary layer
390,802 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10F18"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10F18"],"… typed the way the ontology types it
398,575 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

21 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260822T0600486828500000/10782 prefLabel ef:agent/bootstrap_labels ef:flow/c207d7bf-9abc-479d-8e18-ea93d3545407/v0 ef:flow/c207d7bf-9abc-479d-8e18-ea93d3545407/v1
ef:activity/change/20260822T0600486828500000/10783 name ef:agent/bootstrap_labels ef:flow/c207d7bf-9abc-479d-8e18-ea93d3545407/v1 ef:flow/c207d7bf-9abc-479d-8e18-ea93d3545407/v2
ef:activity/change/20260822T0600486828500000/164704 context ef:agent/default_context_mapping ef:flow/c207d7bf-9abc-479d-8e18-ea93d3545407/v2 ef:flow/c207d7bf-9abc-479d-8e18-ea93d3545407/v3
ef:activity/change/20260822T0600486828500000/164705 context_iri ef:agent/default_context_mapping ef:flow/c207d7bf-9abc-479d-8e18-ea93d3545407/v3 ef:flow/c207d7bf-9abc-479d-8e18-ea93d3545407/v4
ef:activity/change/20260822T0600486828500000/216914 unit_iri ef:agent/unit_normalization ef:flow/c207d7bf-9abc-479d-8e18-ea93d3545407/v4 ef:flow/c207d7bf-9abc-479d-8e18-ea93d3545407/v5
ef:activity/change/20260822T0600486828500000/226925 ec_numbers ef:agent/ec_cross_check ef:flow/c207d7bf-9abc-479d-8e18-ea93d3545407/v5 ef:flow/c207d7bf-9abc-479d-8e18-ea93d3545407/v6
ef:activity/change/20260822T0600486828500000/237445 properties ef:agent/enrich_references ef:flow/c207d7bf-9abc-479d-8e18-ea93d3545407/v6 ef:flow/c207d7bf-9abc-479d-8e18-ea93d3545407/v7
ef:activity/change/20260822T0600486828500000/237446 skos_definition ef:agent/enrich_references ef:flow/c207d7bf-9abc-479d-8e18-ea93d3545407/v7 ef:flow/c207d7bf-9abc-479d-8e18-ea93d3545407/v8
ef:activity/change/20260822T0600486828500000/237447 references ef:agent/enrich_references ef:flow/c207d7bf-9abc-479d-8e18-ea93d3545407/v8 ef:flow/c207d7bf-9abc-479d-8e18-ea93d3545407/v9
ef:activity/change/20260822T0600486828500000/251262 properties ef:agent/rdkit_pre_consensus ef:flow/c207d7bf-9abc-479d-8e18-ea93d3545407/v9 ef:flow/c207d7bf-9abc-479d-8e18-ea93d3545407/v10
ef:activity/change/20260822T0600486828500000/255898 altLabel ef:agent/chebi_altlabels ef:flow/c207d7bf-9abc-479d-8e18-ea93d3545407/v10 ef:flow/c207d7bf-9abc-479d-8e18-ea93d3545407/v11
ef:activity/change/20260822T0600486828500000/270565 prefLabel ef:agent/consensus_match ef:flow/c207d7bf-9abc-479d-8e18-ea93d3545407/v11 ef:flow/c207d7bf-9abc-479d-8e18-ea93d3545407/v12
ef:activity/change/20260822T0600486828500000/270566 altLabel ef:agent/consensus_match ef:flow/c207d7bf-9abc-479d-8e18-ea93d3545407/v12 ef:flow/c207d7bf-9abc-479d-8e18-ea93d3545407/v13
ef:activity/change/20260822T0600486828500000/270567 altLabel ef:agent/consensus_match ef:flow/c207d7bf-9abc-479d-8e18-ea93d3545407/v13 ef:flow/c207d7bf-9abc-479d-8e18-ea93d3545407/v14
ef:activity/change/20260822T0600486828500000/270568 cas_match_labels ef:agent/consensus_match ef:flow/c207d7bf-9abc-479d-8e18-ea93d3545407/v14 ef:flow/c207d7bf-9abc-479d-8e18-ea93d3545407/v15
ef:activity/change/20260822T0600486828500000/276446 properties ef:agent/opsin_iupac ef:flow/c207d7bf-9abc-479d-8e18-ea93d3545407/v15 ef:flow/c207d7bf-9abc-479d-8e18-ea93d3545407/v16
ef:activity/change/20260822T0600486828500000/283052 properties ef:agent/rdkit_post_consensus ef:flow/c207d7bf-9abc-479d-8e18-ea93d3545407/v16 ef:flow/c207d7bf-9abc-479d-8e18-ea93d3545407/v17
ef:activity/change/20260822T0600486828500000/289496 altLabel ef:agent/strip_catalogue_altlabels ef:flow/c207d7bf-9abc-479d-8e18-ea93d3545407/v17 ef:flow/c207d7bf-9abc-479d-8e18-ea93d3545407/v18
ef:activity/change/20260822T0600486828500000/363378 concept_associations ef:agent/carry_associations_onto_flows ef:flow/c207d7bf-9abc-479d-8e18-ea93d3545407/v18 ef:flow/c207d7bf-9abc-479d-8e18-ea93d3545407/v19
ef:activity/change/20260822T0600486828500000/390802 properties ef:agent/normalise_property_values ef:flow/c207d7bf-9abc-479d-8e18-ea93d3545407/v19 ef:flow/c207d7bf-9abc-479d-8e18-ea93d3545407/v20
ef:activity/change/20260822T0600486828500000/398575 types ef:agent/link_flows_to_their_substance ef:flow/c207d7bf-9abc-479d-8e18-ea93d3545407/v20 ef:flow/c207d7bf-9abc-479d-8e18-ea93d3545407/v21

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