Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match group_key=ammoniumsulfanylacetate||dimension=Environmental > media=Air > strata=Unknown; cas=5421-46-5; added Common Chemistry CAS names as altLabel: Acetic acid, 2-mercapto-, ammonium salt (1:1), Acetic acid, mercapto-, monoammonium salt, Ammonium thioglycollate, Thiofaco A-50; object_uuid=fo-5c07a4fb41b9af87
prefLabel 3 bootstrap_labels, consensus_match, normalize_name_case cas=5421-46-5; cc_chebi_agreed_name='Ammonium thioglycolate'; object_uuid=fo-5c07a4fb41b9af87
cas_match_labels 1 consensus_match group_key=ammoniumsulfanylacetate||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'5421-46-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-5c07a4fb41b9af87: {'5421-46-5': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['5421-46-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_156555']; candidate_pubchem_cids=[21534, 16211171, 22177650]; selected_pubchem_cids=[21534]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

21
# Step Field From To Why
3,026 bootstrap_labels prefLabel [{"@value":"ammonium sulfanylacetate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttr… Bootstrapped prefLabel from legacy name field
3,027 bootstrap_labels name ammonium sulfanylacetate Purged legacy name field to enforce prefLabel usage
3,028 bootstrap_labels synonyms ["organic","ammoniummercaptoacetate","ammoniumthioglycolate59%(50%tga)","ammoniumthioglycolate59%(50%tga)lowodor","ammo… [] Removed legacy synonyms field in favor of structured labels
165,390 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
165,391 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
214,349 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
221,783 normalize_name_case prefLabel [{"@value":"ammonium sulfanylacetate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttr… [{"@value":"Ammonium Sulfanylacetate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttr… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
230,086 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H3O2S.H4… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
230,087 enrich_references skos_definition [{"@value":"An organic ammonium salt having thioglycolate(1−) as the counterion. Also known as perm salt, it has use in… Merged ChEBI/PubChem definitions into skos:definition
230,088 enrich_references references [] [{"@id":"https://chem.echa.europa.eu/100.024.128","provenance":{"prov:wasGeneratedBy":"enrich_references.pubchem_identi… Added references with provenance; cas_numbers=['5421-46-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_156555']; candidate_pubchem_cids=[21534, 16211171, 22177650]; selected_pubchem_cids=[21534]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
249,156 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H3O2S.H4… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H3O2S.H4… rdkit_pre_consensus from 'C(C(=O)[O-])S.[NH4+]'; added: monoisotopic_mass
254,722 chebi_altlabels altLabel [] [{"@value":"Ammonium mercaptoacetate","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttri… Added 3 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
263,845 consensus_match prefLabel [{"@value":"Ammonium Sulfanylacetate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttr… [{"@value":"Ammonium thioglycolate","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttribu… cas=5421-46-5; cc_chebi_agreed_name='Ammonium thioglycolate'; object_uuid=fo-5c07a4fb41b9af87
263,846 consensus_match altLabel [{"@value":"Ammonium mercaptoacetate","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttri… [{"@value":"Ammonium mercaptoacetate","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttri… cas=5421-46-5; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-5c07a4fb41b9af87
263,847 consensus_match altLabel [{"@value":"Ammonium mercaptoacetate","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttri… [{"@value":"Ammonium mercaptoacetate","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttri… group_key=ammoniumsulfanylacetate||dimension=Environmental > media=Air > strata=Unknown; cas=5421-46-5; added Common Chemistry CAS names as altLabel: Acetic acid, 2-mercapto-, ammonium salt (1:1), Acetic acid, mercapto-, monoammonium salt, Ammonium thioglycollate, Thiofaco A-50; object_uuid=fo-5c07a4fb41b9af87
263,848 consensus_match cas_match_labels {"5421-46-5":"exactMatch"} group_key=ammoniumsulfanylacetate||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'5421-46-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-5c07a4fb41b9af87: {'5421-46-5': 'exactMatch'}
274,272 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H3O2S.H4… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H3O2S.H4… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Ammonium thioglycolate'
280,701 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H3O2S.H4… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H3O2S.H4… rdkit_post_consensus from 'O=C([O-])CS.[NH4+]'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
363,721 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/c34266f2-5696-… associations resolved on the elementary layer
388,568 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H3O2S.H4… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H3O2S.H4… typed the way the ontology types it
395,362 link_flows_to_their_substance types ["https://w3id.org/chemrof/ChemicalSalt"] the substance's answer, copied onto its flow

PROV-O trail

21 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T1554374006150000/3026 prefLabel ef:agent/bootstrap_labels ef:flow/c34266f2-5696-4899-b5d3-732df42b997a/v0 ef:flow/c34266f2-5696-4899-b5d3-732df42b997a/v1
ef:activity/change/20260821T1554374006150000/3027 name ef:agent/bootstrap_labels ef:flow/c34266f2-5696-4899-b5d3-732df42b997a/v1 ef:flow/c34266f2-5696-4899-b5d3-732df42b997a/v2
ef:activity/change/20260821T1554374006150000/3028 synonyms ef:agent/bootstrap_labels ef:flow/c34266f2-5696-4899-b5d3-732df42b997a/v2 ef:flow/c34266f2-5696-4899-b5d3-732df42b997a/v3
ef:activity/change/20260821T1554374006150000/165390 context ef:agent/default_context_mapping ef:flow/c34266f2-5696-4899-b5d3-732df42b997a/v3 ef:flow/c34266f2-5696-4899-b5d3-732df42b997a/v4
ef:activity/change/20260821T1554374006150000/165391 context_iri ef:agent/default_context_mapping ef:flow/c34266f2-5696-4899-b5d3-732df42b997a/v4 ef:flow/c34266f2-5696-4899-b5d3-732df42b997a/v5
ef:activity/change/20260821T1554374006150000/214349 unit_iri ef:agent/unit_normalization ef:flow/c34266f2-5696-4899-b5d3-732df42b997a/v5 ef:flow/c34266f2-5696-4899-b5d3-732df42b997a/v6
ef:activity/change/20260821T1554374006150000/221783 prefLabel ef:agent/normalize_name_case ef:flow/c34266f2-5696-4899-b5d3-732df42b997a/v6 ef:flow/c34266f2-5696-4899-b5d3-732df42b997a/v7
ef:activity/change/20260821T1554374006150000/230086 properties ef:agent/enrich_references ef:flow/c34266f2-5696-4899-b5d3-732df42b997a/v7 ef:flow/c34266f2-5696-4899-b5d3-732df42b997a/v8
ef:activity/change/20260821T1554374006150000/230087 skos_definition ef:agent/enrich_references ef:flow/c34266f2-5696-4899-b5d3-732df42b997a/v8 ef:flow/c34266f2-5696-4899-b5d3-732df42b997a/v9
ef:activity/change/20260821T1554374006150000/230088 references ef:agent/enrich_references ef:flow/c34266f2-5696-4899-b5d3-732df42b997a/v9 ef:flow/c34266f2-5696-4899-b5d3-732df42b997a/v10
ef:activity/change/20260821T1554374006150000/249156 properties ef:agent/rdkit_pre_consensus ef:flow/c34266f2-5696-4899-b5d3-732df42b997a/v10 ef:flow/c34266f2-5696-4899-b5d3-732df42b997a/v11
ef:activity/change/20260821T1554374006150000/254722 altLabel ef:agent/chebi_altlabels ef:flow/c34266f2-5696-4899-b5d3-732df42b997a/v11 ef:flow/c34266f2-5696-4899-b5d3-732df42b997a/v12
ef:activity/change/20260821T1554374006150000/263845 prefLabel ef:agent/consensus_match ef:flow/c34266f2-5696-4899-b5d3-732df42b997a/v12 ef:flow/c34266f2-5696-4899-b5d3-732df42b997a/v13
ef:activity/change/20260821T1554374006150000/263846 altLabel ef:agent/consensus_match ef:flow/c34266f2-5696-4899-b5d3-732df42b997a/v13 ef:flow/c34266f2-5696-4899-b5d3-732df42b997a/v14
ef:activity/change/20260821T1554374006150000/263847 altLabel ef:agent/consensus_match ef:flow/c34266f2-5696-4899-b5d3-732df42b997a/v14 ef:flow/c34266f2-5696-4899-b5d3-732df42b997a/v15
ef:activity/change/20260821T1554374006150000/263848 cas_match_labels ef:agent/consensus_match ef:flow/c34266f2-5696-4899-b5d3-732df42b997a/v15 ef:flow/c34266f2-5696-4899-b5d3-732df42b997a/v16
ef:activity/change/20260821T1554374006150000/274272 properties ef:agent/opsin_iupac ef:flow/c34266f2-5696-4899-b5d3-732df42b997a/v16 ef:flow/c34266f2-5696-4899-b5d3-732df42b997a/v17
ef:activity/change/20260821T1554374006150000/280701 properties ef:agent/rdkit_post_consensus ef:flow/c34266f2-5696-4899-b5d3-732df42b997a/v17 ef:flow/c34266f2-5696-4899-b5d3-732df42b997a/v18
ef:activity/change/20260821T1554374006150000/363721 concept_associations ef:agent/carry_associations_onto_flows ef:flow/c34266f2-5696-4899-b5d3-732df42b997a/v18 ef:flow/c34266f2-5696-4899-b5d3-732df42b997a/v19
ef:activity/change/20260821T1554374006150000/388568 properties ef:agent/normalise_property_values ef:flow/c34266f2-5696-4899-b5d3-732df42b997a/v19 ef:flow/c34266f2-5696-4899-b5d3-732df42b997a/v20
ef:activity/change/20260821T1554374006150000/395362 types ef:agent/link_flows_to_their_substance ef:flow/c34266f2-5696-4899-b5d3-732df42b997a/v20 ef:flow/c34266f2-5696-4899-b5d3-732df42b997a/v21

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