Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, dedupe_altlabels Deduplicated altLabel values and removed entries matching prefLabel
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=celiprolol||dimension=Environmental > media=Air > indoor=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'56980-93-9': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-e55135e67df0bbe1: {'56980-93-9': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term)
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term)
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['56980-93-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_94461']; candidate_pubchem_cids=[2663, 42373]; selected_pubchem_cids=[2663]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

20
# Step Field From To Why
805 bootstrap_labels prefLabel [{"@value":"celiprolol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… Bootstrapped prefLabel from legacy name field
806 bootstrap_labels name celiprolol Purged legacy name field to enforce prefLabel usage
807 bootstrap_labels synonyms ["organic","celiprolol"] [] Removed legacy synonyms field in favor of structured labels
166,006 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Long-term"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term)
166,007 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-lote Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term)
213,603 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
221,278 normalize_name_case prefLabel [{"@value":"celiprolol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… [{"@value":"Celiprolol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
227,941 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C20H33N3O4… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
227,942 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
227,943 enrich_references references [] [{"@id":"drugcentral:569","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"c… Added references with provenance; cas_numbers=['56980-93-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_94461']; candidate_pubchem_cids=[2663, 42373]; selected_pubchem_cids=[2663]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
248,532 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C20H33N3O4… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C20H33N3O4… rdkit_pre_consensus from 'CCN(CC)C(=O)NC1=CC(=C(C=C1)OCC(CNC(C)(C)C)O)C(=O)C'; added: monoisotopic_mass
254,480 chebi_altlabels altLabel [] [{"@value":"DL-Celiprolol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"c… Added 5 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
264,929 consensus_match altLabel [{"@value":"DL-Celiprolol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"c… [{"@value":"DL-Celiprolol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"c… group_key=celiprolol||dimension=Environmental > media=Air > indoor=Unknown; cas=56980-93-9; added Common Chemistry CAS names as altLabel: (<em>R</em>,<em>S</em>)-Celiprolol, (±)-Celiprolol, 1-[3-Acetyl-4-[3-(<em>tert</em>-butylamino)-2-hydroxypropoxy]phenyl]-3,3-diethylurea, <em>N</em>′-[3-Acetyl-4-[3-[(1,1-dimethylethyl)amino]-2-hydroxypropoxy]phenyl]-<em>N</em>,<em>N</em>-diethylurea, MeSH ID: D017272, Racemic Celiprolol, Urea, <em>N</em>′-[3-acetyl-4-[3-[(1,1-dimethylethyl)amino]-2-hydroxypropoxy]phenyl]-<em>N</em>,<em>N</em>-diethyl-; object_uuid=fo-e55135e67df0bbe1
264,930 consensus_match cas_match_labels {"56980-93-9":"exactMatch"} group_key=celiprolol||dimension=Environmental > media=Air > indoor=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'56980-93-9': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-e55135e67df0bbe1: {'56980-93-9': 'exactMatch'}
273,657 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C20H33N3O4… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C20H33N3O4… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '1-[3-Acetyl-4-[3-(tert-butylamino)-2-hydroxypropoxy]phenyl]-3,3-diethylurea'
280,027 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C20H33N3O4… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C20H33N3O4… rdkit_post_consensus from 'CCN(CC)C(=O)Nc1ccc(OCC(O)CNC(C)(C)C)c(C(C)=O)c1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
291,991 dedupe_altlabels altLabel [{"@value":"DL-Celiprolol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"c… [{"@value":"DL-Celiprolol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"c… Deduplicated altLabel values and removed entries matching prefLabel
364,029 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/c4369943-e046-… associations resolved on the elementary layer
387,935 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C20H33N3O4… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C20H33N3O4… typed the way the ontology types it
394,486 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

20 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260822T0600486828500000/805 prefLabel ef:agent/bootstrap_labels ef:flow/c4369943-e046-41b8-bb79-dda6a192926f/v0 ef:flow/c4369943-e046-41b8-bb79-dda6a192926f/v1
ef:activity/change/20260822T0600486828500000/806 name ef:agent/bootstrap_labels ef:flow/c4369943-e046-41b8-bb79-dda6a192926f/v1 ef:flow/c4369943-e046-41b8-bb79-dda6a192926f/v2
ef:activity/change/20260822T0600486828500000/807 synonyms ef:agent/bootstrap_labels ef:flow/c4369943-e046-41b8-bb79-dda6a192926f/v2 ef:flow/c4369943-e046-41b8-bb79-dda6a192926f/v3
ef:activity/change/20260822T0600486828500000/166006 context ef:agent/default_context_mapping ef:flow/c4369943-e046-41b8-bb79-dda6a192926f/v3 ef:flow/c4369943-e046-41b8-bb79-dda6a192926f/v4
ef:activity/change/20260822T0600486828500000/166007 context_iri ef:agent/default_context_mapping ef:flow/c4369943-e046-41b8-bb79-dda6a192926f/v4 ef:flow/c4369943-e046-41b8-bb79-dda6a192926f/v5
ef:activity/change/20260822T0600486828500000/213603 unit_iri ef:agent/unit_normalization ef:flow/c4369943-e046-41b8-bb79-dda6a192926f/v5 ef:flow/c4369943-e046-41b8-bb79-dda6a192926f/v6
ef:activity/change/20260822T0600486828500000/221278 prefLabel ef:agent/normalize_name_case ef:flow/c4369943-e046-41b8-bb79-dda6a192926f/v6 ef:flow/c4369943-e046-41b8-bb79-dda6a192926f/v7
ef:activity/change/20260822T0600486828500000/227941 properties ef:agent/enrich_references ef:flow/c4369943-e046-41b8-bb79-dda6a192926f/v7 ef:flow/c4369943-e046-41b8-bb79-dda6a192926f/v8
ef:activity/change/20260822T0600486828500000/227942 skos_definition ef:agent/enrich_references ef:flow/c4369943-e046-41b8-bb79-dda6a192926f/v8 ef:flow/c4369943-e046-41b8-bb79-dda6a192926f/v9
ef:activity/change/20260822T0600486828500000/227943 references ef:agent/enrich_references ef:flow/c4369943-e046-41b8-bb79-dda6a192926f/v9 ef:flow/c4369943-e046-41b8-bb79-dda6a192926f/v10
ef:activity/change/20260822T0600486828500000/248532 properties ef:agent/rdkit_pre_consensus ef:flow/c4369943-e046-41b8-bb79-dda6a192926f/v10 ef:flow/c4369943-e046-41b8-bb79-dda6a192926f/v11
ef:activity/change/20260822T0600486828500000/254480 altLabel ef:agent/chebi_altlabels ef:flow/c4369943-e046-41b8-bb79-dda6a192926f/v11 ef:flow/c4369943-e046-41b8-bb79-dda6a192926f/v12
ef:activity/change/20260822T0600486828500000/264929 altLabel ef:agent/consensus_match ef:flow/c4369943-e046-41b8-bb79-dda6a192926f/v12 ef:flow/c4369943-e046-41b8-bb79-dda6a192926f/v13
ef:activity/change/20260822T0600486828500000/264930 cas_match_labels ef:agent/consensus_match ef:flow/c4369943-e046-41b8-bb79-dda6a192926f/v13 ef:flow/c4369943-e046-41b8-bb79-dda6a192926f/v14
ef:activity/change/20260822T0600486828500000/273657 properties ef:agent/opsin_iupac ef:flow/c4369943-e046-41b8-bb79-dda6a192926f/v14 ef:flow/c4369943-e046-41b8-bb79-dda6a192926f/v15
ef:activity/change/20260822T0600486828500000/280027 properties ef:agent/rdkit_post_consensus ef:flow/c4369943-e046-41b8-bb79-dda6a192926f/v15 ef:flow/c4369943-e046-41b8-bb79-dda6a192926f/v16
ef:activity/change/20260822T0600486828500000/291991 altLabel ef:agent/dedupe_altlabels ef:flow/c4369943-e046-41b8-bb79-dda6a192926f/v16 ef:flow/c4369943-e046-41b8-bb79-dda6a192926f/v17
ef:activity/change/20260822T0600486828500000/364029 concept_associations ef:agent/carry_associations_onto_flows ef:flow/c4369943-e046-41b8-bb79-dda6a192926f/v17 ef:flow/c4369943-e046-41b8-bb79-dda6a192926f/v18
ef:activity/change/20260822T0600486828500000/387935 properties ef:agent/normalise_property_values ef:flow/c4369943-e046-41b8-bb79-dda6a192926f/v18 ef:flow/c4369943-e046-41b8-bb79-dda6a192926f/v19
ef:activity/change/20260822T0600486828500000/394486 types ef:agent/link_flows_to_their_substance ef:flow/c4369943-e046-41b8-bb79-dda6a192926f/v19 ef:flow/c4369943-e046-41b8-bb79-dda6a192926f/v20

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