Barium(2+)
Everything that changed this flow. Back to the flow
c7126c80-8176-4c45-950a-da40aa9ebc18
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| altLabel | 5 | chebi_altlabels, consensus_match, dedupe_altlabels, strip_cross_object_altlabels, substance_label_v1 | demoted by the substance's name: Barium (ii) |
| properties | 5 | enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus | the substance's answer, copied onto its flow |
| prefLabel | 3 | bootstrap_labels, normalize_name_case, substance_label_v1 | the substance's name: Barium(2+) |
| cas_match_labels | 1 | consensus_match | group_key=barium(ii)||dimension=Environmental > media=Air > indoor=Unknown; group_sources=['chebi']; cas_sources={'22541-12-4': ['chebi']}; assigned CAS labels from group consensus; object_uuid=fo-836990db2adbb250: {'22541-12-4': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['22541-12-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_37136']; candidate_pubchem_cids=[104810, 568150]; selected_pubchem_cids=[104810]; formula_similarity_expected=['Ba']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
23| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 19,515 | bootstrap_labels | prefLabel | — | [{"@value":"barium (ii)","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"co… | Bootstrapped prefLabel from legacy name field |
| 19,516 | bootstrap_labels | name | barium (ii) | — | Purged legacy name field to enforce prefLabel usage |
| 19,517 | bootstrap_labels | synonyms | ["element in usetox"] | [] | Removed legacy synonyms field in favor of structured labels |
| 167,654 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Water","water_body":"Unknown"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified |
| 167,655 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-wate-unkn | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified |
| 219,694 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 225,527 | normalize_name_case | prefLabel | [{"@value":"barium (ii)","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"co… | [{"@value":"Barium (ii)","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"co… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 245,317 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ba","Ba+2"… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 245,318 | enrich_references | skos_definition | — | [] | Merged ChEBI/PubChem definitions into skos:definition |
| 245,319 | enrich_references | references | [] | [{"@id":"gmelin:6848","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"conse… | Added references with provenance; cas_numbers=['22541-12-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_37136']; candidate_pubchem_cids=[104810, 568150]; selected_pubchem_cids=[104810]; formula_similarity_expected=['Ba']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 256,919 | chebi_altlabels | altLabel | [] | [{"@value":"BARIUM ION","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"cons… | Added 7 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 257,482 | strip_cross_object_altlabels | altLabel | [{"@value":"BARIUM ION","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"cons… | [{"@value":"BARIUM ION","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"cons… | Removed 1 altLabel value(s) that duplicate another flow object's prefLabel: 'Barium' |
| 264,011 | consensus_match | altLabel | [{"@value":"BARIUM ION","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"cons… | [{"@value":"BARIUM ION","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"cons… | group_key=barium(ii)||dimension=Environmental > media=Air > indoor=Unknown; cas=22541-12-4; added Common Chemistry CAS names as altLabel: Barium (Ba<sup>2+</sup>), Barium cation, Barium dication, Barium ion(2+), Barium(II) ion, Barium, ion (Ba<sup>2+</sup>); object_uuid=fo-836990db2adbb250 |
| 264,012 | consensus_match | cas_match_labels | — | {"22541-12-4":"exactMatch"} | group_key=barium(ii)||dimension=Environmental > media=Air > indoor=Unknown; group_sources=['chebi']; cas_sources={'22541-12-4': ['chebi']}; assigned CAS labels from group consensus; object_uuid=fo-836990db2adbb250: {'22541-12-4': 'exactMatch'} |
| 278,781 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ba","Ba+2"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ba","Ba+2"… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Barium (ii)' |
| 285,565 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ba","Ba+2"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ba","Ba+2"… | rdkit_post_consensus from '[Ba+2]'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 293,061 | dedupe_altlabels | altLabel | [{"@value":"BARIUM ION","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"cons… | [{"@value":"BARIUM ION","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"cons… | Deduplicated altLabel values and removed entries matching prefLabel |
| 364,873 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/c7126c80-8176-… | associations resolved on the elementary layer |
| 393,148 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ba","Ba+2"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ba","Ba+2"… | typed the way the ontology types it |
| 401,944 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/AtomCation"] | the substance's answer, copied onto its flow |
| 401,945 | link_flows_to_their_substance | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ba","Ba+2"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ba","Ba+2"… | the substance's answer, copied onto its flow |
| 403,984 | substance_label_v1 | altLabel | [{"@value":"BARIUM ION","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"cons… | [{"@value":"BARIUM ION","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"cons… | demoted by the substance's name: Barium (ii) |
| 403,985 | substance_label_v1 | prefLabel | [{"@value":"Barium (ii)","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"co… | [{"@value":"Barium(2+)","@language":"en","@lang":"en","source":{"prov:wasGeneratedBy":"substance_label_v1","prov:wasAtt… | the substance's name: Barium(2+) |
PROV-O trail
23 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260820T0738569779880000/19515 | prefLabel | ef:agent/bootstrap_labels | ef:flow/c7126c80-8176-4c45-950a-da40aa9ebc18/v0 | ef:flow/c7126c80-8176-4c45-950a-da40aa9ebc18/v1 |
| ef:activity/change/20260820T0738569779880000/19516 | name | ef:agent/bootstrap_labels | ef:flow/c7126c80-8176-4c45-950a-da40aa9ebc18/v1 | ef:flow/c7126c80-8176-4c45-950a-da40aa9ebc18/v2 |
| ef:activity/change/20260820T0738569779880000/19517 | synonyms | ef:agent/bootstrap_labels | ef:flow/c7126c80-8176-4c45-950a-da40aa9ebc18/v2 | ef:flow/c7126c80-8176-4c45-950a-da40aa9ebc18/v3 |
| ef:activity/change/20260820T0738569779880000/167654 | context | ef:agent/default_context_mapping | ef:flow/c7126c80-8176-4c45-950a-da40aa9ebc18/v3 | ef:flow/c7126c80-8176-4c45-950a-da40aa9ebc18/v4 |
| ef:activity/change/20260820T0738569779880000/167655 | context_iri | ef:agent/default_context_mapping | ef:flow/c7126c80-8176-4c45-950a-da40aa9ebc18/v4 | ef:flow/c7126c80-8176-4c45-950a-da40aa9ebc18/v5 |
| ef:activity/change/20260820T0738569779880000/219694 | unit_iri | ef:agent/unit_normalization | ef:flow/c7126c80-8176-4c45-950a-da40aa9ebc18/v5 | ef:flow/c7126c80-8176-4c45-950a-da40aa9ebc18/v6 |
| ef:activity/change/20260820T0738569779880000/225527 | prefLabel | ef:agent/normalize_name_case | ef:flow/c7126c80-8176-4c45-950a-da40aa9ebc18/v6 | ef:flow/c7126c80-8176-4c45-950a-da40aa9ebc18/v7 |
| ef:activity/change/20260820T0738569779880000/245317 | properties | ef:agent/enrich_references | ef:flow/c7126c80-8176-4c45-950a-da40aa9ebc18/v7 | ef:flow/c7126c80-8176-4c45-950a-da40aa9ebc18/v8 |
| ef:activity/change/20260820T0738569779880000/245318 | skos_definition | ef:agent/enrich_references | ef:flow/c7126c80-8176-4c45-950a-da40aa9ebc18/v8 | ef:flow/c7126c80-8176-4c45-950a-da40aa9ebc18/v9 |
| ef:activity/change/20260820T0738569779880000/245319 | references | ef:agent/enrich_references | ef:flow/c7126c80-8176-4c45-950a-da40aa9ebc18/v9 | ef:flow/c7126c80-8176-4c45-950a-da40aa9ebc18/v10 |
| ef:activity/change/20260820T0738569779880000/256919 | altLabel | ef:agent/chebi_altlabels | ef:flow/c7126c80-8176-4c45-950a-da40aa9ebc18/v10 | ef:flow/c7126c80-8176-4c45-950a-da40aa9ebc18/v11 |
| ef:activity/change/20260820T0738569779880000/257482 | altLabel | ef:agent/strip_cross_object_altlabels | ef:flow/c7126c80-8176-4c45-950a-da40aa9ebc18/v11 | ef:flow/c7126c80-8176-4c45-950a-da40aa9ebc18/v12 |
| ef:activity/change/20260820T0738569779880000/264011 | altLabel | ef:agent/consensus_match | ef:flow/c7126c80-8176-4c45-950a-da40aa9ebc18/v12 | ef:flow/c7126c80-8176-4c45-950a-da40aa9ebc18/v13 |
| ef:activity/change/20260820T0738569779880000/264012 | cas_match_labels | ef:agent/consensus_match | ef:flow/c7126c80-8176-4c45-950a-da40aa9ebc18/v13 | ef:flow/c7126c80-8176-4c45-950a-da40aa9ebc18/v14 |
| ef:activity/change/20260820T0738569779880000/278781 | properties | ef:agent/opsin_iupac | ef:flow/c7126c80-8176-4c45-950a-da40aa9ebc18/v14 | ef:flow/c7126c80-8176-4c45-950a-da40aa9ebc18/v15 |
| ef:activity/change/20260820T0738569779880000/285565 | properties | ef:agent/rdkit_post_consensus | ef:flow/c7126c80-8176-4c45-950a-da40aa9ebc18/v15 | ef:flow/c7126c80-8176-4c45-950a-da40aa9ebc18/v16 |
| ef:activity/change/20260820T0738569779880000/293061 | altLabel | ef:agent/dedupe_altlabels | ef:flow/c7126c80-8176-4c45-950a-da40aa9ebc18/v16 | ef:flow/c7126c80-8176-4c45-950a-da40aa9ebc18/v17 |
| ef:activity/change/20260820T0738569779880000/364873 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/c7126c80-8176-4c45-950a-da40aa9ebc18/v17 | ef:flow/c7126c80-8176-4c45-950a-da40aa9ebc18/v18 |
| ef:activity/change/20260820T0738569779880000/393148 | properties | ef:agent/normalise_property_values | ef:flow/c7126c80-8176-4c45-950a-da40aa9ebc18/v18 | ef:flow/c7126c80-8176-4c45-950a-da40aa9ebc18/v19 |
| ef:activity/change/20260820T0738569779880000/401944 | types | ef:agent/link_flows_to_their_substance | ef:flow/c7126c80-8176-4c45-950a-da40aa9ebc18/v19 | ef:flow/c7126c80-8176-4c45-950a-da40aa9ebc18/v20 |
| ef:activity/change/20260820T0738569779880000/401945 | properties | ef:agent/link_flows_to_their_substance | ef:flow/c7126c80-8176-4c45-950a-da40aa9ebc18/v20 | ef:flow/c7126c80-8176-4c45-950a-da40aa9ebc18/v21 |
| ef:activity/change/20260820T0738569779880000/403984 | altLabel | ef:agent/substance_label_v1 | ef:flow/c7126c80-8176-4c45-950a-da40aa9ebc18/v21 | ef:flow/c7126c80-8176-4c45-950a-da40aa9ebc18/v22 |
| ef:activity/change/20260820T0738569779880000/403985 | prefLabel | ef:agent/substance_label_v1 | ef:flow/c7126c80-8176-4c45-950a-da40aa9ebc18/v22 | ef:flow/c7126c80-8176-4c45-950a-da40aa9ebc18/v23 |