Pyrazinamide
Everything that changed this flow. Back to the flow
c735cdac-f1c4-4ee6-b7c6-538eed0d0b4e
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 3 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 3 catalogue altLabel value(s): 'D 50' (grade code), 'MK 56' (grade code), 'NSC 14911' (registry code) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=pyrazinamide||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'98-96-4': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-cabaf7ab2d85c0df: {'98-96-4': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['98-96-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_45285']; candidate_pubchem_cids=[1046, 9283, 101616, 3019914, 71432824, 135436542]; selected_pubchem_cids=[1046]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
20| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 4,257 | bootstrap_labels | prefLabel | — | [{"@value":"pyrazinamide","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"c… | Bootstrapped prefLabel from legacy name field |
| 4,258 | bootstrap_labels | name | pyrazinamide | — | Purged legacy name field to enforce prefLabel usage |
| 4,259 | bootstrap_labels | synonyms | ["organic","pyrazinamide"] | [] | Removed legacy synonyms field in favor of structured labels |
| 167,730 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Unknown"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified |
| 167,731 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-unkn | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified |
| 214,761 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 222,074 | normalize_name_case | prefLabel | [{"@value":"pyrazinamide","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"c… | [{"@value":"Pyrazinamide","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"c… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 231,275 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H5N3O"],… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 231,276 | enrich_references | skos_definition | — | [{"@value":"A monocarboxylic acid amide resulting from the formal condensation of the carboxy group of pyrazinoic acid… | Merged ChEBI/PubChem definitions into skos:definition |
| 231,277 | enrich_references | references | [] | [{"@id":"beilstein:112306","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"… | Added references with provenance; cas_numbers=['98-96-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_45285']; candidate_pubchem_cids=[1046, 9283, 101616, 3019914, 71432824, 135436542]; selected_pubchem_cids=[1046]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 249,495 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H5N3O"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H5N3O"],… | rdkit_pre_consensus from 'C1=CN=C(C=N1)C(=O)N'; added: monoisotopic_mass |
| 254,917 | chebi_altlabels | altLabel | [] | [{"@value":"2-carbamylpyrazine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedT… | Added 9 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 271,180 | consensus_match | altLabel | [{"@value":"2-carbamylpyrazine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedT… | [{"@value":"2-carbamylpyrazine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedT… | group_key=pyrazinamide||dimension=Environmental > media=Air > strata=Aircraft cruise height; cas=98-96-4; added Common Chemistry CAS names as altLabel: 2-(Aminocarbonyl)pyrazine, 2-Carboxamidopyrazine, Aldinamid, Aldinamide, D 50, Eprazin, Farmizina, Isopas, MK 56, MeSH ID: D011718, NSC 14911, Novamid, Pirazimida, Pirazinamid, Pyrafat, Pyramizade, Pyrazide, Pyrazine carboxylamide, Pyrazinecarboxamide, Pyrazinecarboxylic acid amide, Rifafour e-200, Rifcin, Rozide, Tebrazid, Unipyranamide, Zinamide, α-Pyrazinamide; object_uuid=fo-cabaf7ab2d85c0df |
| 271,181 | consensus_match | cas_match_labels | — | {"98-96-4":"exactMatch"} | group_key=pyrazinamide||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'98-96-4': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-cabaf7ab2d85c0df: {'98-96-4': 'exactMatch'} |
| 274,628 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H5N3O"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H5N3O"],… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Pyrazinamide' |
| 281,082 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H5N3O"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H5N3O"],… | rdkit_post_consensus from 'NC(=O)c1cnccn1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 288,121 | strip_catalogue_altlabels | altLabel | [{"@value":"2-carbamylpyrazine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedT… | [{"@value":"2-carbamylpyrazine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedT… | Removed 3 catalogue altLabel value(s): 'D 50' (grade code), 'MK 56' (grade code), 'NSC 14911' (registry code) |
| 364,891 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/c735cdac-f1c4-… | associations resolved on the elementary layer |
| 388,933 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H5N3O"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H5N3O"],… | typed the way the ontology types it |
| 395,877 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
PROV-O trail
20 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260821T1554374006150000/4257 | prefLabel | ef:agent/bootstrap_labels | ef:flow/c735cdac-f1c4-4ee6-b7c6-538eed0d0b4e/v0 | ef:flow/c735cdac-f1c4-4ee6-b7c6-538eed0d0b4e/v1 |
| ef:activity/change/20260821T1554374006150000/4258 | name | ef:agent/bootstrap_labels | ef:flow/c735cdac-f1c4-4ee6-b7c6-538eed0d0b4e/v1 | ef:flow/c735cdac-f1c4-4ee6-b7c6-538eed0d0b4e/v2 |
| ef:activity/change/20260821T1554374006150000/4259 | synonyms | ef:agent/bootstrap_labels | ef:flow/c735cdac-f1c4-4ee6-b7c6-538eed0d0b4e/v2 | ef:flow/c735cdac-f1c4-4ee6-b7c6-538eed0d0b4e/v3 |
| ef:activity/change/20260821T1554374006150000/167730 | context | ef:agent/default_context_mapping | ef:flow/c735cdac-f1c4-4ee6-b7c6-538eed0d0b4e/v3 | ef:flow/c735cdac-f1c4-4ee6-b7c6-538eed0d0b4e/v4 |
| ef:activity/change/20260821T1554374006150000/167731 | context_iri | ef:agent/default_context_mapping | ef:flow/c735cdac-f1c4-4ee6-b7c6-538eed0d0b4e/v4 | ef:flow/c735cdac-f1c4-4ee6-b7c6-538eed0d0b4e/v5 |
| ef:activity/change/20260821T1554374006150000/214761 | unit_iri | ef:agent/unit_normalization | ef:flow/c735cdac-f1c4-4ee6-b7c6-538eed0d0b4e/v5 | ef:flow/c735cdac-f1c4-4ee6-b7c6-538eed0d0b4e/v6 |
| ef:activity/change/20260821T1554374006150000/222074 | prefLabel | ef:agent/normalize_name_case | ef:flow/c735cdac-f1c4-4ee6-b7c6-538eed0d0b4e/v6 | ef:flow/c735cdac-f1c4-4ee6-b7c6-538eed0d0b4e/v7 |
| ef:activity/change/20260821T1554374006150000/231275 | properties | ef:agent/enrich_references | ef:flow/c735cdac-f1c4-4ee6-b7c6-538eed0d0b4e/v7 | ef:flow/c735cdac-f1c4-4ee6-b7c6-538eed0d0b4e/v8 |
| ef:activity/change/20260821T1554374006150000/231276 | skos_definition | ef:agent/enrich_references | ef:flow/c735cdac-f1c4-4ee6-b7c6-538eed0d0b4e/v8 | ef:flow/c735cdac-f1c4-4ee6-b7c6-538eed0d0b4e/v9 |
| ef:activity/change/20260821T1554374006150000/231277 | references | ef:agent/enrich_references | ef:flow/c735cdac-f1c4-4ee6-b7c6-538eed0d0b4e/v9 | ef:flow/c735cdac-f1c4-4ee6-b7c6-538eed0d0b4e/v10 |
| ef:activity/change/20260821T1554374006150000/249495 | properties | ef:agent/rdkit_pre_consensus | ef:flow/c735cdac-f1c4-4ee6-b7c6-538eed0d0b4e/v10 | ef:flow/c735cdac-f1c4-4ee6-b7c6-538eed0d0b4e/v11 |
| ef:activity/change/20260821T1554374006150000/254917 | altLabel | ef:agent/chebi_altlabels | ef:flow/c735cdac-f1c4-4ee6-b7c6-538eed0d0b4e/v11 | ef:flow/c735cdac-f1c4-4ee6-b7c6-538eed0d0b4e/v12 |
| ef:activity/change/20260821T1554374006150000/271180 | altLabel | ef:agent/consensus_match | ef:flow/c735cdac-f1c4-4ee6-b7c6-538eed0d0b4e/v12 | ef:flow/c735cdac-f1c4-4ee6-b7c6-538eed0d0b4e/v13 |
| ef:activity/change/20260821T1554374006150000/271181 | cas_match_labels | ef:agent/consensus_match | ef:flow/c735cdac-f1c4-4ee6-b7c6-538eed0d0b4e/v13 | ef:flow/c735cdac-f1c4-4ee6-b7c6-538eed0d0b4e/v14 |
| ef:activity/change/20260821T1554374006150000/274628 | properties | ef:agent/opsin_iupac | ef:flow/c735cdac-f1c4-4ee6-b7c6-538eed0d0b4e/v14 | ef:flow/c735cdac-f1c4-4ee6-b7c6-538eed0d0b4e/v15 |
| ef:activity/change/20260821T1554374006150000/281082 | properties | ef:agent/rdkit_post_consensus | ef:flow/c735cdac-f1c4-4ee6-b7c6-538eed0d0b4e/v15 | ef:flow/c735cdac-f1c4-4ee6-b7c6-538eed0d0b4e/v16 |
| ef:activity/change/20260821T1554374006150000/288121 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/c735cdac-f1c4-4ee6-b7c6-538eed0d0b4e/v16 | ef:flow/c735cdac-f1c4-4ee6-b7c6-538eed0d0b4e/v17 |
| ef:activity/change/20260821T1554374006150000/364891 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/c735cdac-f1c4-4ee6-b7c6-538eed0d0b4e/v17 | ef:flow/c735cdac-f1c4-4ee6-b7c6-538eed0d0b4e/v18 |
| ef:activity/change/20260821T1554374006150000/388933 | properties | ef:agent/normalise_property_values | ef:flow/c735cdac-f1c4-4ee6-b7c6-538eed0d0b4e/v18 | ef:flow/c735cdac-f1c4-4ee6-b7c6-538eed0d0b4e/v19 |
| ef:activity/change/20260821T1554374006150000/395877 | types | ef:agent/link_flows_to_their_substance | ef:flow/c735cdac-f1c4-4ee6-b7c6-538eed0d0b4e/v19 | ef:flow/c735cdac-f1c4-4ee6-b7c6-538eed0d0b4e/v20 |