Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 6 enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus the substance's answer, copied onto its flow
altLabel 2 consensus_match, dedupe_altlabels Deduplicated altLabel values and removed entries matching prefLabel
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=6-n-octanoyl(2s)-2,6-diaminohexanoicacid||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['ec_inventory']; cas_sources={'23735-96-8': ['ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-4e096fc4d6a06f29: {'23735-96-8': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['23735-96-8']; matched_chebi_ids=[]; candidate_pubchem_cids=[90242, 210021, 13783498]; selected_pubchem_cids=[90242]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

20
# Step Field From To Why
21,185 bootstrap_labels prefLabel [{"@value":"6-n-octanoyl(2s)-2,6-diaminohexanoic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labe… Bootstrapped prefLabel from legacy name field
21,186 bootstrap_labels name 6-n-octanoyl(2s)-2,6-diaminohexanoic acid Purged legacy name field to enforce prefLabel usage
21,187 bootstrap_labels synonyms ["organic","n6-(1-oxooctyl)-l-lysine"] [] Removed legacy synonyms field in favor of structured labels
168,086 default_context_mapping context {"dimension":"Environmental","media":"Air","indoor":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
168,087 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-indr-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
220,154 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
225,887 normalize_name_case prefLabel [{"@value":"6-n-octanoyl(2s)-2,6-diaminohexanoic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labe… [{"@value":"6-n-octanoyl(2s)-2,6-diaminohexanoic Acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labe… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
246,619 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C14H28N2O3… Added ChEBI/PubChem properties (chebi_ids=0, pubchem_cids=1)
246,620 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
246,621 enrich_references references [] [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J242.659E","provenance":{"prov:wasGeneratedBy":"enrich_referen… Added references with provenance; cas_numbers=['23735-96-8']; matched_chebi_ids=[]; candidate_pubchem_cids=[90242, 210021, 13783498]; selected_pubchem_cids=[90242]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
253,930 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C14H28N2O3… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C14H28N2O3… rdkit_pre_consensus from 'CCCCCCCC(=O)NCCCCC(C(=O)O)N'; added: inchi2d_string, molecular_mass, monoisotopic_mass
263,276 consensus_match altLabel [] [{"@value":"<em>N</em>6-Capryloyl-<span class=\"text-smallcaps\">L</span>-lysine","@language":"en","source":{"prov:wasG… group_key=6-n-octanoyl(2s)-2,6-diaminohexanoicacid||dimension=Environmental > media=Ground > geography=Agricultural; cas=23735-96-8; added Common Chemistry CAS names as altLabel: <em>N</em>6-Capryloyl-<span class="text-smallcaps">L</span>-lysine, <em>N</em><sup>6</sup>-(1-Oxooctyl)-<span class="text-smallcaps">L</span>-lysine, <em>N</em><sup>6</sup>-Octanoyl-<span class="text-smallcaps">L</span>-lysine, <span class="text-smallcaps">L</span>-Lysine, <em>N</em><sup>6</sup>-(1-oxooctyl)-, Amihope OL, Lysine, <em>N</em><sup>6</sup>-octanoyl-, Lysine, <em>N</em><sup>6</sup>-octanoyl-, <span class="text-smallcaps">L</span>-; object_uuid=fo-4e096fc4d6a06f29
263,277 consensus_match cas_match_labels {"23735-96-8":"exactMatch"} group_key=6-n-octanoyl(2s)-2,6-diaminohexanoicacid||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['ec_inventory']; cas_sources={'23735-96-8': ['ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-4e096fc4d6a06f29: {'23735-96-8': 'exactMatch'}
279,118 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C14H28N2O3… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C14H28N2O3… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'N6-Capryloyl-L-lysine'
285,969 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C14H28N2O3… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C14H28N2O3… rdkit_post_consensus from 'CCCCCCCC(=O)NCCCC[C@H](N)C(=O)O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
293,115 dedupe_altlabels altLabel [{"@value":"<em>N</em>6-Capryloyl-<span class=\"text-smallcaps\">L</span>-lysine","@language":"en","source":{"prov:wasG… [{"@value":"N6-Capryloyl-L-lysine","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttribut… Deduplicated altLabel values and removed entries matching prefLabel
365,069 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/c7c3392a-c51f-… associations resolved on the elementary layer
393,510 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C14H28N2O3… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C14H28N2O3… typed the way the ontology types it
402,519 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
402,520 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C14H28N2O3… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C14H28N2O3… the substance's answer, copied onto its flow

PROV-O trail

20 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T1554374006150000/21185 prefLabel ef:agent/bootstrap_labels ef:flow/c7c3392a-c51f-4a75-8433-acd9a990077e/v0 ef:flow/c7c3392a-c51f-4a75-8433-acd9a990077e/v1
ef:activity/change/20260821T1554374006150000/21186 name ef:agent/bootstrap_labels ef:flow/c7c3392a-c51f-4a75-8433-acd9a990077e/v1 ef:flow/c7c3392a-c51f-4a75-8433-acd9a990077e/v2
ef:activity/change/20260821T1554374006150000/21187 synonyms ef:agent/bootstrap_labels ef:flow/c7c3392a-c51f-4a75-8433-acd9a990077e/v2 ef:flow/c7c3392a-c51f-4a75-8433-acd9a990077e/v3
ef:activity/change/20260821T1554374006150000/168086 context ef:agent/default_context_mapping ef:flow/c7c3392a-c51f-4a75-8433-acd9a990077e/v3 ef:flow/c7c3392a-c51f-4a75-8433-acd9a990077e/v4
ef:activity/change/20260821T1554374006150000/168087 context_iri ef:agent/default_context_mapping ef:flow/c7c3392a-c51f-4a75-8433-acd9a990077e/v4 ef:flow/c7c3392a-c51f-4a75-8433-acd9a990077e/v5
ef:activity/change/20260821T1554374006150000/220154 unit_iri ef:agent/unit_normalization ef:flow/c7c3392a-c51f-4a75-8433-acd9a990077e/v5 ef:flow/c7c3392a-c51f-4a75-8433-acd9a990077e/v6
ef:activity/change/20260821T1554374006150000/225887 prefLabel ef:agent/normalize_name_case ef:flow/c7c3392a-c51f-4a75-8433-acd9a990077e/v6 ef:flow/c7c3392a-c51f-4a75-8433-acd9a990077e/v7
ef:activity/change/20260821T1554374006150000/246619 properties ef:agent/enrich_references ef:flow/c7c3392a-c51f-4a75-8433-acd9a990077e/v7 ef:flow/c7c3392a-c51f-4a75-8433-acd9a990077e/v8
ef:activity/change/20260821T1554374006150000/246620 skos_definition ef:agent/enrich_references ef:flow/c7c3392a-c51f-4a75-8433-acd9a990077e/v8 ef:flow/c7c3392a-c51f-4a75-8433-acd9a990077e/v9
ef:activity/change/20260821T1554374006150000/246621 references ef:agent/enrich_references ef:flow/c7c3392a-c51f-4a75-8433-acd9a990077e/v9 ef:flow/c7c3392a-c51f-4a75-8433-acd9a990077e/v10
ef:activity/change/20260821T1554374006150000/253930 properties ef:agent/rdkit_pre_consensus ef:flow/c7c3392a-c51f-4a75-8433-acd9a990077e/v10 ef:flow/c7c3392a-c51f-4a75-8433-acd9a990077e/v11
ef:activity/change/20260821T1554374006150000/263276 altLabel ef:agent/consensus_match ef:flow/c7c3392a-c51f-4a75-8433-acd9a990077e/v11 ef:flow/c7c3392a-c51f-4a75-8433-acd9a990077e/v12
ef:activity/change/20260821T1554374006150000/263277 cas_match_labels ef:agent/consensus_match ef:flow/c7c3392a-c51f-4a75-8433-acd9a990077e/v12 ef:flow/c7c3392a-c51f-4a75-8433-acd9a990077e/v13
ef:activity/change/20260821T1554374006150000/279118 properties ef:agent/opsin_iupac ef:flow/c7c3392a-c51f-4a75-8433-acd9a990077e/v13 ef:flow/c7c3392a-c51f-4a75-8433-acd9a990077e/v14
ef:activity/change/20260821T1554374006150000/285969 properties ef:agent/rdkit_post_consensus ef:flow/c7c3392a-c51f-4a75-8433-acd9a990077e/v14 ef:flow/c7c3392a-c51f-4a75-8433-acd9a990077e/v15
ef:activity/change/20260821T1554374006150000/293115 altLabel ef:agent/dedupe_altlabels ef:flow/c7c3392a-c51f-4a75-8433-acd9a990077e/v15 ef:flow/c7c3392a-c51f-4a75-8433-acd9a990077e/v16
ef:activity/change/20260821T1554374006150000/365069 concept_associations ef:agent/carry_associations_onto_flows ef:flow/c7c3392a-c51f-4a75-8433-acd9a990077e/v16 ef:flow/c7c3392a-c51f-4a75-8433-acd9a990077e/v17
ef:activity/change/20260821T1554374006150000/393510 properties ef:agent/normalise_property_values ef:flow/c7c3392a-c51f-4a75-8433-acd9a990077e/v17 ef:flow/c7c3392a-c51f-4a75-8433-acd9a990077e/v18
ef:activity/change/20260821T1554374006150000/402519 types ef:agent/link_flows_to_their_substance ef:flow/c7c3392a-c51f-4a75-8433-acd9a990077e/v18 ef:flow/c7c3392a-c51f-4a75-8433-acd9a990077e/v19
ef:activity/change/20260821T1554374006150000/402520 properties ef:agent/link_flows_to_their_substance ef:flow/c7c3392a-c51f-4a75-8433-acd9a990077e/v19 ef:flow/c7c3392a-c51f-4a75-8433-acd9a990077e/v20

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