Farnesane
Everything that changed this flow. Back to the flow
c80e8442-d340-4392-9c61-c49a8d8c3cda
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 3 | chebi_altlabels, consensus_match | group_key=2,6,10-trimethyldodecane||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); cas=3891-98-3; added Common Chemistry CAS names as altLabel: Dodecane, 2,6,10-trimethyl-, Hemisqualane, Neossance TMD; object_uuid=fo-af5b4f252257588c |
| prefLabel | 2 | bootstrap_labels, consensus_match | cas=3891-98-3; cc_chebi_agreed_name='Farnesane'; object_uuid=fo-af5b4f252257588c |
| cas_match_labels | 1 | consensus_match | group_key=2,6,10-trimethyldodecane||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); group_sources=['chebi', 'pubchem']; cas_sources={'3891-98-3': ['chebi', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-af5b4f252257588c: {'3891-98-3': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term) |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term) |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['3891-98-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_36756']; candidate_pubchem_cids=[19773]; selected_pubchem_cids=[19773]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
20| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 17,320 | bootstrap_labels | prefLabel | — | [{"@value":"2,6,10-trimethyldodecane","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttr… | Bootstrapped prefLabel from legacy name field |
| 17,321 | bootstrap_labels | name | 2,6,10-trimethyldodecane | — | Purged legacy name field to enforce prefLabel usage |
| 17,322 | bootstrap_labels | synonyms | ["2,6,10-trimethyldodecane(farnesane)","farnesaneothernamesfarnesane","2,6,10-trimethyldodecane","farnesane"] | [] | Removed legacy synonyms field in favor of structured labels |
| 168,260 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Long-term"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term) |
| 168,261 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-lote | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term) |
| 219,017 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 243,426 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H32"],"… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 243,427 | enrich_references | skos_definition | — | [{"@value":"A sesquiterpene that is dodecane substituted by methyl groups at positions 2, 6 and 10.","@language":"en","… | Merged ChEBI/PubChem definitions into skos:definition |
| 243,428 | enrich_references | references | [] | [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J13.488K","provenance":{"prov:wasGeneratedBy":"enrich_referenc… | Added references with provenance; cas_numbers=['3891-98-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_36756']; candidate_pubchem_cids=[19773]; selected_pubchem_cids=[19773]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 252,996 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H32"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H32"],"… | rdkit_pre_consensus from 'CCC(C)CCCC(C)CCCC(C)C'; added: monoisotopic_mass |
| 256,657 | chebi_altlabels | altLabel | [] | [{"@value":"Farnesan","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consen… | Added 2 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 260,061 | consensus_match | prefLabel | [{"@value":"2,6,10-trimethyldodecane","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttr… | [{"@value":"Farnesane","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"conse… | cas=3891-98-3; cc_chebi_agreed_name='Farnesane'; object_uuid=fo-af5b4f252257588c |
| 260,062 | consensus_match | altLabel | [{"@value":"Farnesan","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consen… | [{"@value":"Farnesan","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consen… | cas=3891-98-3; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-af5b4f252257588c |
| 260,063 | consensus_match | altLabel | [{"@value":"Farnesan","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consen… | [{"@value":"Farnesan","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consen… | group_key=2,6,10-trimethyldodecane||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); cas=3891-98-3; added Common Chemistry CAS names as altLabel: Dodecane, 2,6,10-trimethyl-, Hemisqualane, Neossance TMD; object_uuid=fo-af5b4f252257588c |
| 260,064 | consensus_match | cas_match_labels | — | {"3891-98-3":"exactMatch"} | group_key=2,6,10-trimethyldodecane||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); group_sources=['chebi', 'pubchem']; cas_sources={'3891-98-3': ['chebi', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-af5b4f252257588c: {'3891-98-3': 'exactMatch'} |
| 278,200 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H32"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H32"],"… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '2,6,10-trimethyldodecane' |
| 284,942 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H32"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H32"],"… | rdkit_post_consensus from 'CCC(C)CCCC(C)CCCC(C)C'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 365,156 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/c80e8442-d340-… | associations resolved on the elementary layer |
| 392,552 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H32"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H32"],"… | typed the way the ontology types it |
| 401,085 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
PROV-O trail
20 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260822T0600486828500000/17320 | prefLabel | ef:agent/bootstrap_labels | ef:flow/c80e8442-d340-4392-9c61-c49a8d8c3cda/v0 | ef:flow/c80e8442-d340-4392-9c61-c49a8d8c3cda/v1 |
| ef:activity/change/20260822T0600486828500000/17321 | name | ef:agent/bootstrap_labels | ef:flow/c80e8442-d340-4392-9c61-c49a8d8c3cda/v1 | ef:flow/c80e8442-d340-4392-9c61-c49a8d8c3cda/v2 |
| ef:activity/change/20260822T0600486828500000/17322 | synonyms | ef:agent/bootstrap_labels | ef:flow/c80e8442-d340-4392-9c61-c49a8d8c3cda/v2 | ef:flow/c80e8442-d340-4392-9c61-c49a8d8c3cda/v3 |
| ef:activity/change/20260822T0600486828500000/168260 | context | ef:agent/default_context_mapping | ef:flow/c80e8442-d340-4392-9c61-c49a8d8c3cda/v3 | ef:flow/c80e8442-d340-4392-9c61-c49a8d8c3cda/v4 |
| ef:activity/change/20260822T0600486828500000/168261 | context_iri | ef:agent/default_context_mapping | ef:flow/c80e8442-d340-4392-9c61-c49a8d8c3cda/v4 | ef:flow/c80e8442-d340-4392-9c61-c49a8d8c3cda/v5 |
| ef:activity/change/20260822T0600486828500000/219017 | unit_iri | ef:agent/unit_normalization | ef:flow/c80e8442-d340-4392-9c61-c49a8d8c3cda/v5 | ef:flow/c80e8442-d340-4392-9c61-c49a8d8c3cda/v6 |
| ef:activity/change/20260822T0600486828500000/243426 | properties | ef:agent/enrich_references | ef:flow/c80e8442-d340-4392-9c61-c49a8d8c3cda/v6 | ef:flow/c80e8442-d340-4392-9c61-c49a8d8c3cda/v7 |
| ef:activity/change/20260822T0600486828500000/243427 | skos_definition | ef:agent/enrich_references | ef:flow/c80e8442-d340-4392-9c61-c49a8d8c3cda/v7 | ef:flow/c80e8442-d340-4392-9c61-c49a8d8c3cda/v8 |
| ef:activity/change/20260822T0600486828500000/243428 | references | ef:agent/enrich_references | ef:flow/c80e8442-d340-4392-9c61-c49a8d8c3cda/v8 | ef:flow/c80e8442-d340-4392-9c61-c49a8d8c3cda/v9 |
| ef:activity/change/20260822T0600486828500000/252996 | properties | ef:agent/rdkit_pre_consensus | ef:flow/c80e8442-d340-4392-9c61-c49a8d8c3cda/v9 | ef:flow/c80e8442-d340-4392-9c61-c49a8d8c3cda/v10 |
| ef:activity/change/20260822T0600486828500000/256657 | altLabel | ef:agent/chebi_altlabels | ef:flow/c80e8442-d340-4392-9c61-c49a8d8c3cda/v10 | ef:flow/c80e8442-d340-4392-9c61-c49a8d8c3cda/v11 |
| ef:activity/change/20260822T0600486828500000/260061 | prefLabel | ef:agent/consensus_match | ef:flow/c80e8442-d340-4392-9c61-c49a8d8c3cda/v11 | ef:flow/c80e8442-d340-4392-9c61-c49a8d8c3cda/v12 |
| ef:activity/change/20260822T0600486828500000/260062 | altLabel | ef:agent/consensus_match | ef:flow/c80e8442-d340-4392-9c61-c49a8d8c3cda/v12 | ef:flow/c80e8442-d340-4392-9c61-c49a8d8c3cda/v13 |
| ef:activity/change/20260822T0600486828500000/260063 | altLabel | ef:agent/consensus_match | ef:flow/c80e8442-d340-4392-9c61-c49a8d8c3cda/v13 | ef:flow/c80e8442-d340-4392-9c61-c49a8d8c3cda/v14 |
| ef:activity/change/20260822T0600486828500000/260064 | cas_match_labels | ef:agent/consensus_match | ef:flow/c80e8442-d340-4392-9c61-c49a8d8c3cda/v14 | ef:flow/c80e8442-d340-4392-9c61-c49a8d8c3cda/v15 |
| ef:activity/change/20260822T0600486828500000/278200 | properties | ef:agent/opsin_iupac | ef:flow/c80e8442-d340-4392-9c61-c49a8d8c3cda/v15 | ef:flow/c80e8442-d340-4392-9c61-c49a8d8c3cda/v16 |
| ef:activity/change/20260822T0600486828500000/284942 | properties | ef:agent/rdkit_post_consensus | ef:flow/c80e8442-d340-4392-9c61-c49a8d8c3cda/v16 | ef:flow/c80e8442-d340-4392-9c61-c49a8d8c3cda/v17 |
| ef:activity/change/20260822T0600486828500000/365156 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/c80e8442-d340-4392-9c61-c49a8d8c3cda/v17 | ef:flow/c80e8442-d340-4392-9c61-c49a8d8c3cda/v18 |
| ef:activity/change/20260822T0600486828500000/392552 | properties | ef:agent/normalise_property_values | ef:flow/c80e8442-d340-4392-9c61-c49a8d8c3cda/v18 | ef:flow/c80e8442-d340-4392-9c61-c49a8d8c3cda/v19 |
| ef:activity/change/20260822T0600486828500000/401085 | types | ef:agent/link_flows_to_their_substance | ef:flow/c80e8442-d340-4392-9c61-c49a8d8c3cda/v19 | ef:flow/c80e8442-d340-4392-9c61-c49a8d8c3cda/v20 |