Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 6 enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus the substance's answer, copied onto its flow
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 1 catalogue altLabel value(s): 'NSC 758896' (registry code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=fluvastatin||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'pubchem']; cas_sources={'93957-54-1': ['chebi', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-9adc9857b912acc2: {'93957-54-1': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['93957-54-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_38561']; candidate_pubchem_cids=[3403, 446155, 1548972, 5353627, 6347538, 9932627, 23663976, 40492830]; selected_pubchem_cids=[1548972]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

21
# Step Field From To Why
4,056 bootstrap_labels prefLabel [{"@value":"fluvastatin","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"co… Bootstrapped prefLabel from legacy name field
4,057 bootstrap_labels name fluvastatin Purged legacy name field to enforce prefLabel usage
4,058 bootstrap_labels synonyms ["(+)-(3R,5S)-fluvastatin","(3R,5S,6E)-7-[3-(4-fluorophenyl)-1-(1-methylethyl)-1H-indol-2-yl]-3,5-dihydroxyhept-6-enoic… [] Removed legacy synonyms field in favor of structured labels
169,832 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
169,833 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
214,695 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
222,025 normalize_name_case prefLabel [{"@value":"fluvastatin","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"co… [{"@value":"Fluvastatin","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"co… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
231,085 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C24H26FNO4… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
231,086 enrich_references skos_definition [{"@value":"A racemate comprising equimolar amounts of (3R,5S)- and (3S,5R)-fluvastatin. An HMG-CoA reductase inhibitor… Merged ChEBI/PubChem definitions into skos:definition
231,087 enrich_references references [] [{"@id":"beilstein:9168031","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":… Added references with provenance; cas_numbers=['93957-54-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_38561']; candidate_pubchem_cids=[3403, 446155, 1548972, 5353627, 6347538, 9932627, 23663976, 40492830]; selected_pubchem_cids=[1548972]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
249,441 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C24H26FNO4… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C24H26FNO4… rdkit_pre_consensus from 'CC(C)N1C2=CC=CC=C2C(=C1/C=C/[C@@H](C[C@@H](CC(=O)O)O)O)C3=CC=C(C=C3)F'; added: monoisotopic_mass
254,897 chebi_altlabels altLabel [] [{"@value":"(+-)-fluvastatin","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… Added 10 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
267,269 consensus_match altLabel [{"@value":"(+-)-fluvastatin","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… [{"@value":"(+-)-fluvastatin","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… group_key=fluvastatin||dimension=Environmental > media=Ground > geography=Agricultural; cas=93957-54-1; added Common Chemistry CAS names as altLabel: 6-Heptenoic acid, 7-[3-(4-fluorophenyl)-1-(1-methylethyl)-1<em>H</em>-indol-2-yl]-3,5-dihydroxy-, (3<em>R</em>,5<em>S</em>,6<em>E</em>)-<em>rel</em>-, 6-Heptenoic acid, 7-[3-(4-fluorophenyl)-1-(1-methylethyl)-1<em>H</em>-indol-2-yl]-3,5-dihydroxy-, [<em>R</em>*,<em>S</em>*-(<em>E</em>)]-, 6-Heptenoic acid, 7-[3-(4-fluorophenyl)-1-(1-methylethyl)-1<em>H</em>-indol-2-yl]-3,5-dihydroxy-, [<em>R</em>*,<em>S</em>*-(<em>E</em>)]-(±)-, <em>rel</em>-(3<em>R</em>,5<em>S</em>,6<em>E</em>)-7-[3-(4-Fluorophenyl)-1-(1-methylethyl)-1<em>H</em>-indol-2-yl]-3,5-dihydroxy-6-heptenoic acid, Fluvastatin XL, Leschol, NSC 758896; object_uuid=fo-9adc9857b912acc2
267,270 consensus_match cas_match_labels {"93957-54-1":"exactMatch"} group_key=fluvastatin||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'pubchem']; cas_sources={'93957-54-1': ['chebi', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-9adc9857b912acc2: {'93957-54-1': 'exactMatch'}
274,573 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C24H26FNO4… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C24H26FNO4… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'rac-(3R,5S,6E)-7-(3-(4-fluorophenyl)-1-(1-methylethyl)-1H-indol-2-yl)-3,5-dihydroxy-6-heptenoic acid'
281,024 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C24H26FNO4… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C24H26FNO4… rdkit_post_consensus from 'CC(C)n1c(/C=C/[C@@H](O)C[C@@H](O)CC(=O)O)c(-c2ccc(F)cc2)c2ccccc21'; added: inchi2d_key_string; confirmed: smiles_string, inchi2d_string, molecular_formula, molecular_mass, monoisotopic_mass
288,084 strip_catalogue_altlabels altLabel [{"@value":"(+-)-fluvastatin","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… [{"@value":"(+-)-fluvastatin","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… Removed 1 catalogue altLabel value(s): 'NSC 758896' (registry code)
365,942 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/caac6a80-0f30-… associations resolved on the elementary layer
388,880 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C24H26FNO4… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C24H26FNO4… typed the way the ontology types it
395,797 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
395,798 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C24H26FNO4… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C24H26FNO4… the substance's answer, copied onto its flow

PROV-O trail

21 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260822T0600486828500000/4056 prefLabel ef:agent/bootstrap_labels ef:flow/caac6a80-0f30-4a01-bdbc-50cc60584edd/v0 ef:flow/caac6a80-0f30-4a01-bdbc-50cc60584edd/v1
ef:activity/change/20260822T0600486828500000/4057 name ef:agent/bootstrap_labels ef:flow/caac6a80-0f30-4a01-bdbc-50cc60584edd/v1 ef:flow/caac6a80-0f30-4a01-bdbc-50cc60584edd/v2
ef:activity/change/20260822T0600486828500000/4058 synonyms ef:agent/bootstrap_labels ef:flow/caac6a80-0f30-4a01-bdbc-50cc60584edd/v2 ef:flow/caac6a80-0f30-4a01-bdbc-50cc60584edd/v3
ef:activity/change/20260822T0600486828500000/169832 context ef:agent/default_context_mapping ef:flow/caac6a80-0f30-4a01-bdbc-50cc60584edd/v3 ef:flow/caac6a80-0f30-4a01-bdbc-50cc60584edd/v4
ef:activity/change/20260822T0600486828500000/169833 context_iri ef:agent/default_context_mapping ef:flow/caac6a80-0f30-4a01-bdbc-50cc60584edd/v4 ef:flow/caac6a80-0f30-4a01-bdbc-50cc60584edd/v5
ef:activity/change/20260822T0600486828500000/214695 unit_iri ef:agent/unit_normalization ef:flow/caac6a80-0f30-4a01-bdbc-50cc60584edd/v5 ef:flow/caac6a80-0f30-4a01-bdbc-50cc60584edd/v6
ef:activity/change/20260822T0600486828500000/222025 prefLabel ef:agent/normalize_name_case ef:flow/caac6a80-0f30-4a01-bdbc-50cc60584edd/v6 ef:flow/caac6a80-0f30-4a01-bdbc-50cc60584edd/v7
ef:activity/change/20260822T0600486828500000/231085 properties ef:agent/enrich_references ef:flow/caac6a80-0f30-4a01-bdbc-50cc60584edd/v7 ef:flow/caac6a80-0f30-4a01-bdbc-50cc60584edd/v8
ef:activity/change/20260822T0600486828500000/231086 skos_definition ef:agent/enrich_references ef:flow/caac6a80-0f30-4a01-bdbc-50cc60584edd/v8 ef:flow/caac6a80-0f30-4a01-bdbc-50cc60584edd/v9
ef:activity/change/20260822T0600486828500000/231087 references ef:agent/enrich_references ef:flow/caac6a80-0f30-4a01-bdbc-50cc60584edd/v9 ef:flow/caac6a80-0f30-4a01-bdbc-50cc60584edd/v10
ef:activity/change/20260822T0600486828500000/249441 properties ef:agent/rdkit_pre_consensus ef:flow/caac6a80-0f30-4a01-bdbc-50cc60584edd/v10 ef:flow/caac6a80-0f30-4a01-bdbc-50cc60584edd/v11
ef:activity/change/20260822T0600486828500000/254897 altLabel ef:agent/chebi_altlabels ef:flow/caac6a80-0f30-4a01-bdbc-50cc60584edd/v11 ef:flow/caac6a80-0f30-4a01-bdbc-50cc60584edd/v12
ef:activity/change/20260822T0600486828500000/267269 altLabel ef:agent/consensus_match ef:flow/caac6a80-0f30-4a01-bdbc-50cc60584edd/v12 ef:flow/caac6a80-0f30-4a01-bdbc-50cc60584edd/v13
ef:activity/change/20260822T0600486828500000/267270 cas_match_labels ef:agent/consensus_match ef:flow/caac6a80-0f30-4a01-bdbc-50cc60584edd/v13 ef:flow/caac6a80-0f30-4a01-bdbc-50cc60584edd/v14
ef:activity/change/20260822T0600486828500000/274573 properties ef:agent/opsin_iupac ef:flow/caac6a80-0f30-4a01-bdbc-50cc60584edd/v14 ef:flow/caac6a80-0f30-4a01-bdbc-50cc60584edd/v15
ef:activity/change/20260822T0600486828500000/281024 properties ef:agent/rdkit_post_consensus ef:flow/caac6a80-0f30-4a01-bdbc-50cc60584edd/v15 ef:flow/caac6a80-0f30-4a01-bdbc-50cc60584edd/v16
ef:activity/change/20260822T0600486828500000/288084 altLabel ef:agent/strip_catalogue_altlabels ef:flow/caac6a80-0f30-4a01-bdbc-50cc60584edd/v16 ef:flow/caac6a80-0f30-4a01-bdbc-50cc60584edd/v17
ef:activity/change/20260822T0600486828500000/365942 concept_associations ef:agent/carry_associations_onto_flows ef:flow/caac6a80-0f30-4a01-bdbc-50cc60584edd/v17 ef:flow/caac6a80-0f30-4a01-bdbc-50cc60584edd/v18
ef:activity/change/20260822T0600486828500000/388880 properties ef:agent/normalise_property_values ef:flow/caac6a80-0f30-4a01-bdbc-50cc60584edd/v18 ef:flow/caac6a80-0f30-4a01-bdbc-50cc60584edd/v19
ef:activity/change/20260822T0600486828500000/395797 types ef:agent/link_flows_to_their_substance ef:flow/caac6a80-0f30-4a01-bdbc-50cc60584edd/v19 ef:flow/caac6a80-0f30-4a01-bdbc-50cc60584edd/v20
ef:activity/change/20260822T0600486828500000/395798 properties ef:agent/link_flows_to_their_substance ef:flow/caac6a80-0f30-4a01-bdbc-50cc60584edd/v20 ef:flow/caac6a80-0f30-4a01-bdbc-50cc60584edd/v21

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