Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 4 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 2 catalogue altLabel value(s): 'NSC 119476' (registry code), 'R 601A' (grade code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=isopentane||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'78-78-4': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-58c42bd6faeb90d7: {'78-78-4': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['78-78-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_30362']; candidate_pubchem_cids=[6556]; selected_pubchem_cids=[6556]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

19
# Step Field From To Why
7,646 bootstrap_labels prefLabel [{"@value":"isopentane","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… Bootstrapped prefLabel from legacy name field
7,647 bootstrap_labels name isopentane Purged legacy name field to enforce prefLabel usage
25,109 bootstrap_labels synonyms ["2-methylbutane","isopentane","butane, 2-methyl-","iso-pentane","isopentanefraction","notapplicable","pentaani,iso-oth… [] Removed legacy synonyms field in favor of structured labels
169,984 default_context_mapping context {"dimension":"Environmental","media":"Air","indoor":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
169,985 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-indr-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
215,892 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
222,878 normalize_name_case prefLabel [{"@value":"isopentane","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… [{"@value":"Isopentane","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
234,501 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H12"],"a… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
234,502 enrich_references skos_definition [{"@value":"An alkane that is butane substituted by a methyl group at position 2.","@language":"en","provenance":{"prov… Merged ChEBI/PubChem definitions into skos:definition
234,503 enrich_references references [] [{"@id":"gmelin:49318","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"cons… Added references with provenance; cas_numbers=['78-78-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_30362']; candidate_pubchem_cids=[6556]; selected_pubchem_cids=[6556]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
255,409 chebi_altlabels altLabel [] [{"@value":"(CH3)2CH-CH2-CH3","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… Added 9 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
268,134 consensus_match altLabel [{"@value":"(CH3)2CH-CH2-CH3","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… [{"@value":"(CH3)2CH-CH2-CH3","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… group_key=isopentane||dimension=Environmental > media=Air > strata=Unknown; cas=78-78-4; added Common Chemistry CAS names as altLabel: Borger Isopentane, Butane, 2-methyl-, Exxsol Isopentane S, Methylbutane, NSC 119476, R 601A; object_uuid=fo-58c42bd6faeb90d7
268,135 consensus_match cas_match_labels {"78-78-4":"exactMatch"} group_key=isopentane||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'78-78-4': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-58c42bd6faeb90d7: {'78-78-4': 'exactMatch'}
275,585 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H12"],"a… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H12"],"a… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Isopentane'
282,114 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H12"],"a… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H12"],"a… rdkit_post_consensus from 'CCC(C)C'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
288,831 strip_catalogue_altlabels altLabel [{"@value":"(CH3)2CH-CH2-CH3","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… [{"@value":"(CH3)2CH-CH2-CH3","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… Removed 2 catalogue altLabel value(s): 'NSC 119476' (registry code), 'R 601A' (grade code)
366,018 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/cafd2287-cf13-… associations resolved on the elementary layer
389,903 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H12"],"a… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H12"],"a… typed the way the ontology types it
397,279 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

19 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260822T0600486828500000/7646 prefLabel ef:agent/bootstrap_labels ef:flow/cafd2287-cf13-4f6d-8bef-901798a4f21e/v0 ef:flow/cafd2287-cf13-4f6d-8bef-901798a4f21e/v1
ef:activity/change/20260822T0600486828500000/7647 name ef:agent/bootstrap_labels ef:flow/cafd2287-cf13-4f6d-8bef-901798a4f21e/v1 ef:flow/cafd2287-cf13-4f6d-8bef-901798a4f21e/v2
ef:activity/change/20260822T0600486828500000/25109 synonyms ef:agent/bootstrap_labels ef:flow/cafd2287-cf13-4f6d-8bef-901798a4f21e/v2 ef:flow/cafd2287-cf13-4f6d-8bef-901798a4f21e/v3
ef:activity/change/20260822T0600486828500000/169984 context ef:agent/default_context_mapping ef:flow/cafd2287-cf13-4f6d-8bef-901798a4f21e/v3 ef:flow/cafd2287-cf13-4f6d-8bef-901798a4f21e/v4
ef:activity/change/20260822T0600486828500000/169985 context_iri ef:agent/default_context_mapping ef:flow/cafd2287-cf13-4f6d-8bef-901798a4f21e/v4 ef:flow/cafd2287-cf13-4f6d-8bef-901798a4f21e/v5
ef:activity/change/20260822T0600486828500000/215892 unit_iri ef:agent/unit_normalization ef:flow/cafd2287-cf13-4f6d-8bef-901798a4f21e/v5 ef:flow/cafd2287-cf13-4f6d-8bef-901798a4f21e/v6
ef:activity/change/20260822T0600486828500000/222878 prefLabel ef:agent/normalize_name_case ef:flow/cafd2287-cf13-4f6d-8bef-901798a4f21e/v6 ef:flow/cafd2287-cf13-4f6d-8bef-901798a4f21e/v7
ef:activity/change/20260822T0600486828500000/234501 properties ef:agent/enrich_references ef:flow/cafd2287-cf13-4f6d-8bef-901798a4f21e/v7 ef:flow/cafd2287-cf13-4f6d-8bef-901798a4f21e/v8
ef:activity/change/20260822T0600486828500000/234502 skos_definition ef:agent/enrich_references ef:flow/cafd2287-cf13-4f6d-8bef-901798a4f21e/v8 ef:flow/cafd2287-cf13-4f6d-8bef-901798a4f21e/v9
ef:activity/change/20260822T0600486828500000/234503 references ef:agent/enrich_references ef:flow/cafd2287-cf13-4f6d-8bef-901798a4f21e/v9 ef:flow/cafd2287-cf13-4f6d-8bef-901798a4f21e/v10
ef:activity/change/20260822T0600486828500000/255409 altLabel ef:agent/chebi_altlabels ef:flow/cafd2287-cf13-4f6d-8bef-901798a4f21e/v10 ef:flow/cafd2287-cf13-4f6d-8bef-901798a4f21e/v11
ef:activity/change/20260822T0600486828500000/268134 altLabel ef:agent/consensus_match ef:flow/cafd2287-cf13-4f6d-8bef-901798a4f21e/v11 ef:flow/cafd2287-cf13-4f6d-8bef-901798a4f21e/v12
ef:activity/change/20260822T0600486828500000/268135 cas_match_labels ef:agent/consensus_match ef:flow/cafd2287-cf13-4f6d-8bef-901798a4f21e/v12 ef:flow/cafd2287-cf13-4f6d-8bef-901798a4f21e/v13
ef:activity/change/20260822T0600486828500000/275585 properties ef:agent/opsin_iupac ef:flow/cafd2287-cf13-4f6d-8bef-901798a4f21e/v13 ef:flow/cafd2287-cf13-4f6d-8bef-901798a4f21e/v14
ef:activity/change/20260822T0600486828500000/282114 properties ef:agent/rdkit_post_consensus ef:flow/cafd2287-cf13-4f6d-8bef-901798a4f21e/v14 ef:flow/cafd2287-cf13-4f6d-8bef-901798a4f21e/v15
ef:activity/change/20260822T0600486828500000/288831 altLabel ef:agent/strip_catalogue_altlabels ef:flow/cafd2287-cf13-4f6d-8bef-901798a4f21e/v15 ef:flow/cafd2287-cf13-4f6d-8bef-901798a4f21e/v16
ef:activity/change/20260822T0600486828500000/366018 concept_associations ef:agent/carry_associations_onto_flows ef:flow/cafd2287-cf13-4f6d-8bef-901798a4f21e/v16 ef:flow/cafd2287-cf13-4f6d-8bef-901798a4f21e/v17
ef:activity/change/20260822T0600486828500000/389903 properties ef:agent/normalise_property_values ef:flow/cafd2287-cf13-4f6d-8bef-901798a4f21e/v17 ef:flow/cafd2287-cf13-4f6d-8bef-901798a4f21e/v18
ef:activity/change/20260822T0600486828500000/397279 types ef:agent/link_flows_to_their_substance ef:flow/cafd2287-cf13-4f6d-8bef-901798a4f21e/v18 ef:flow/cafd2287-cf13-4f6d-8bef-901798a4f21e/v19

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