Consensus flow list

By field

13 fields
Field Changes Written by Latest note
altLabel 5 chebi_altlabels, consensus_match, strip_catalogue_altlabels, strip_cross_object_altlabels Removed 1 catalogue altLabel value(s): 'NSC 158935' (registry code)
properties 5 enrich_references, link_flows_to_their_substance, normalise_property_values, rdkit_post_consensus, rdkit_pre_consensus the substance's answer, copied onto its flow
prefLabel 4 bootstrap_labels, consensus_match, flow_layers.pubchem_element_enrichment, normalize_name_case element name from the flow object: Cerium
cas_match_labels 1 consensus_match group_key=cerium(3+)||dimension=Resource > media=Ground; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'7440-45-1': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-b189d3adfd43e0d1: {'7440-45-1': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['7440-45-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_33369']; candidate_pubchem_cids=[23974]; selected_pubchem_cids=[23974]; formula_similarity_expected=['Ce']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

24
# Step Field From To Why
21,101 bootstrap_labels prefLabel [{"@value":"cerium(3+)","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… Bootstrapped prefLabel from legacy name field
21,102 bootstrap_labels name cerium(3+) Purged legacy name field to enforce prefLabel usage
21,103 bootstrap_labels synonyms ["element","cerium"] [] Removed legacy synonyms field in favor of structured labels
170,058 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Medium stack, <150 meters","population_density":"Rural (<1000 peop… Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks
170,059 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-mest15me-ru10pesq Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks
215,728 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
225,880 normalize_name_case prefLabel [{"@value":"cerium(3+)","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… [{"@value":"Cerium(3+)","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
234,034 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ce"],"atte… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
234,035 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
234,036 enrich_references references [] [{"@id":"gmelin:16275","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"cons… Added references with provenance; cas_numbers=['7440-45-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_33369']; candidate_pubchem_cids=[23974]; selected_pubchem_cids=[23974]; formula_similarity_expected=['Ce']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
250,299 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ce"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ce"],"atte… rdkit_pre_consensus from '[Ce]'; added: monoisotopic_mass
257,066 chebi_altlabels altLabel [] [{"@value":"58Ce","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… Added 6 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
257,486 strip_cross_object_altlabels altLabel [{"@value":"58Ce","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… [{"@value":"58Ce","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… Removed 1 altLabel value(s) that duplicate another flow object's prefLabel: 'cerium'
264,954 consensus_match prefLabel [{"@value":"Cerium(3+)","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… [{"@value":"Cerium","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"consensu… cas=7440-45-1; cc_chebi_agreed_name='Cerium'; object_uuid=fo-b189d3adfd43e0d1
264,955 consensus_match altLabel [{"@value":"58Ce","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… [{"@value":"58Ce","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… cas=7440-45-1; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-b189d3adfd43e0d1
264,957 consensus_match altLabel [{"@value":"58Ce","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… [{"@value":"58Ce","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… group_key=cerium(3+)||dimension=Resource > media=Ground; cas=7440-45-1; added Common Chemistry CAS names as altLabel: MeSH ID: D002563, NSC 158935; object_uuid=fo-b189d3adfd43e0d1
264,958 consensus_match cas_match_labels {"7440-45-1":"exactMatch"} group_key=cerium(3+)||dimension=Resource > media=Ground; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'7440-45-1': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-b189d3adfd43e0d1: {'7440-45-1': 'exactMatch'}
285,972 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ce"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ce"],"atte… rdkit_post_consensus from '[Ce]'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
291,443 strip_catalogue_altlabels altLabel [{"@value":"58Ce","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… [{"@value":"58Ce","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… Removed 1 catalogue altLabel value(s): 'NSC 158935' (registry code)
366,075 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/cb1a4bdf-b344-… associations resolved on the elementary layer
393,517 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ce"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ce"],"atte… typed the way the ontology types it
397,058 link_flows_to_their_substance types ["https://w3id.org/chemrof/ChemicalElement"] the substance's answer, copied onto its flow
402,519 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ce"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Ce"],"atte… the substance's answer, copied onto its flow
403,857 flow_layers.pubchem_element_enrichment prefLabel [{"@value":"Cerium","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"consensu… [{"@value":"Cerium","@language":"en","@lang":"en","source":{"prov:wasGeneratedBy":"flow_layers.pubchem_element_enrichme… element name from the flow object: Cerium

PROV-O trail

24 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T0738569779880000/21101 prefLabel ef:agent/bootstrap_labels ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v0 ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v1
ef:activity/change/20260820T0738569779880000/21102 name ef:agent/bootstrap_labels ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v1 ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v2
ef:activity/change/20260820T0738569779880000/21103 synonyms ef:agent/bootstrap_labels ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v2 ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v3
ef:activity/change/20260820T0738569779880000/170058 context ef:agent/default_context_mapping ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v3 ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v4
ef:activity/change/20260820T0738569779880000/170059 context_iri ef:agent/default_context_mapping ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v4 ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v5
ef:activity/change/20260820T0738569779880000/215728 unit_iri ef:agent/unit_normalization ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v5 ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v6
ef:activity/change/20260820T0738569779880000/225880 prefLabel ef:agent/normalize_name_case ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v6 ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v7
ef:activity/change/20260820T0738569779880000/234034 properties ef:agent/enrich_references ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v7 ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v8
ef:activity/change/20260820T0738569779880000/234035 skos_definition ef:agent/enrich_references ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v8 ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v9
ef:activity/change/20260820T0738569779880000/234036 references ef:agent/enrich_references ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v9 ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v10
ef:activity/change/20260820T0738569779880000/250299 properties ef:agent/rdkit_pre_consensus ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v10 ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v11
ef:activity/change/20260820T0738569779880000/257066 altLabel ef:agent/chebi_altlabels ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v11 ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v12
ef:activity/change/20260820T0738569779880000/257486 altLabel ef:agent/strip_cross_object_altlabels ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v12 ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v13
ef:activity/change/20260820T0738569779880000/264954 prefLabel ef:agent/consensus_match ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v13 ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v14
ef:activity/change/20260820T0738569779880000/264955 altLabel ef:agent/consensus_match ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v14 ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v15
ef:activity/change/20260820T0738569779880000/264957 altLabel ef:agent/consensus_match ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v15 ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v16
ef:activity/change/20260820T0738569779880000/264958 cas_match_labels ef:agent/consensus_match ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v16 ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v17
ef:activity/change/20260820T0738569779880000/285972 properties ef:agent/rdkit_post_consensus ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v17 ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v18
ef:activity/change/20260820T0738569779880000/291443 altLabel ef:agent/strip_catalogue_altlabels ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v18 ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v19
ef:activity/change/20260820T0738569779880000/366075 concept_associations ef:agent/carry_associations_onto_flows ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v19 ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v20
ef:activity/change/20260820T0738569779880000/393517 properties ef:agent/normalise_property_values ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v20 ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v21
ef:activity/change/20260820T0738569779880000/397058 types ef:agent/link_flows_to_their_substance ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v21 ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v22
ef:activity/change/20260820T0738569779880000/402519 properties ef:agent/link_flows_to_their_substance ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v22 ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v23
ef:activity/change/20260820T0738569779880000/403857 prefLabel ef:agent/flow_layers.pubchem_element_enrichment ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v23 ef:flow/cb1a4bdf-b344-4737-8f6c-e9d9daea3d5b/v24

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