Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 4 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 2 catalogue altLabel value(s): 'B 0464' (grade code), 'NSC 8711' (registry code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=biphenyl-4,4'-diol||dimension=Environmental > media=Ground > geography=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'92-88-6': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-31f74ea8e5b589c3: {'92-88-6': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['92-88-6']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_34367']; candidate_pubchem_cids=[7112, 68117, 191995, 4723804, 53421112]; selected_pubchem_cids=[7112]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

19
# Step Field From To Why
18,136 bootstrap_labels prefLabel [{"@value":"biphenyl-4,4'-diol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributed… Bootstrapped prefLabel from legacy name field
18,137 bootstrap_labels name biphenyl-4,4'-diol Purged legacy name field to enforce prefLabel usage
18,138 bootstrap_labels synonyms ["(1,1'-Biphenyl)-4,4'-diol","4,4 inverted exclamation marka-Biphenol","4,4 inverted exclamation marka-Biphenyldiol","4… [] Removed legacy synonyms field in favor of structured labels
170,906 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Agricultural"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
170,907 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-agri Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
219,275 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
225,232 normalize_name_case prefLabel [{"@value":"biphenyl-4,4'-diol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributed… [{"@value":"Biphenyl-4,4'-diol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributed… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
244,158 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H10O2"]… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
244,159 enrich_references skos_definition [{"@value":"A member of the class of hydroxybiphenyls that is biphenyl with hydroxy groups at positions 4 and 4'.","@la… Merged ChEBI/PubChem definitions into skos:definition
244,160 enrich_references references [] [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J45.978J","provenance":{"prov:wasGeneratedBy":"enrich_referenc… Added references with provenance; cas_numbers=['92-88-6']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_34367']; candidate_pubchem_cids=[7112, 68117, 191995, 4723804, 53421112]; selected_pubchem_cids=[7112]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
256,768 chebi_altlabels altLabel [] [{"@value":"4,4'-Biphenyldiol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo… Added 8 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
264,284 consensus_match altLabel [{"@value":"4,4'-Biphenyldiol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo… [{"@value":"4,4'-Biphenyldiol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo… group_key=biphenyl-4,4'-diol||dimension=Environmental > media=Ground > geography=Unknown; cas=92-88-6; added Common Chemistry CAS names as altLabel: 4,4′-Biphenol, 4,4′-Biphenyldiol, 4,4′-Bisphenol, 4,4′-Dihydroxy-1,1′-biphenyl, 4,4′-Dihydroxybiphenyl, 4,4′-Dihydroxydiphenyl, 4,4′-Diphenol, 4-(4-Hydroxyphenyl)phenol, <em>p</em>,<em>p</em>′-Biphenol, <em>p</em>,<em>p</em>′-Dihydroxybiphenyl, <em>p</em>,<em>p</em>′-Diphenol, <em>p</em>-Dihydroxydiphenyl, <em>p</em>-Diphenol, ASM DOD, Antioxidant DOD, B 0464, BPL, BPL (phenol), NSC 8711, [1,1′-Biphenyl]-4,4′-diol; object_uuid=fo-31f74ea8e5b589c3
264,285 consensus_match cas_match_labels {"92-88-6":"exactMatch"} group_key=biphenyl-4,4'-diol||dimension=Environmental > media=Ground > geography=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'92-88-6': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-31f74ea8e5b589c3: {'92-88-6': 'exactMatch'}
278,418 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H10O2"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H10O2"]… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Biphenyl-4,4'-diol'
285,178 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H10O2"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H10O2"]… rdkit_post_consensus from 'Oc1ccc(-c2ccc(O)cc2)cc1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
290,912 strip_catalogue_altlabels altLabel [{"@value":"4,4'-Biphenyldiol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo… [{"@value":"4,4'-Biphenyldiol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo… Removed 2 catalogue altLabel value(s): 'B 0464' (grade code), 'NSC 8711' (registry code)
366,479 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/cc7b2d97-bdc2-… associations resolved on the elementary layer
392,784 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H10O2"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H10O2"]… typed the way the ontology types it
401,414 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

19 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T1554374006150000/18136 prefLabel ef:agent/bootstrap_labels ef:flow/cc7b2d97-bdc2-4823-a9e2-f716ce65254e/v0 ef:flow/cc7b2d97-bdc2-4823-a9e2-f716ce65254e/v1
ef:activity/change/20260821T1554374006150000/18137 name ef:agent/bootstrap_labels ef:flow/cc7b2d97-bdc2-4823-a9e2-f716ce65254e/v1 ef:flow/cc7b2d97-bdc2-4823-a9e2-f716ce65254e/v2
ef:activity/change/20260821T1554374006150000/18138 synonyms ef:agent/bootstrap_labels ef:flow/cc7b2d97-bdc2-4823-a9e2-f716ce65254e/v2 ef:flow/cc7b2d97-bdc2-4823-a9e2-f716ce65254e/v3
ef:activity/change/20260821T1554374006150000/170906 context ef:agent/default_context_mapping ef:flow/cc7b2d97-bdc2-4823-a9e2-f716ce65254e/v3 ef:flow/cc7b2d97-bdc2-4823-a9e2-f716ce65254e/v4
ef:activity/change/20260821T1554374006150000/170907 context_iri ef:agent/default_context_mapping ef:flow/cc7b2d97-bdc2-4823-a9e2-f716ce65254e/v4 ef:flow/cc7b2d97-bdc2-4823-a9e2-f716ce65254e/v5
ef:activity/change/20260821T1554374006150000/219275 unit_iri ef:agent/unit_normalization ef:flow/cc7b2d97-bdc2-4823-a9e2-f716ce65254e/v5 ef:flow/cc7b2d97-bdc2-4823-a9e2-f716ce65254e/v6
ef:activity/change/20260821T1554374006150000/225232 prefLabel ef:agent/normalize_name_case ef:flow/cc7b2d97-bdc2-4823-a9e2-f716ce65254e/v6 ef:flow/cc7b2d97-bdc2-4823-a9e2-f716ce65254e/v7
ef:activity/change/20260821T1554374006150000/244158 properties ef:agent/enrich_references ef:flow/cc7b2d97-bdc2-4823-a9e2-f716ce65254e/v7 ef:flow/cc7b2d97-bdc2-4823-a9e2-f716ce65254e/v8
ef:activity/change/20260821T1554374006150000/244159 skos_definition ef:agent/enrich_references ef:flow/cc7b2d97-bdc2-4823-a9e2-f716ce65254e/v8 ef:flow/cc7b2d97-bdc2-4823-a9e2-f716ce65254e/v9
ef:activity/change/20260821T1554374006150000/244160 references ef:agent/enrich_references ef:flow/cc7b2d97-bdc2-4823-a9e2-f716ce65254e/v9 ef:flow/cc7b2d97-bdc2-4823-a9e2-f716ce65254e/v10
ef:activity/change/20260821T1554374006150000/256768 altLabel ef:agent/chebi_altlabels ef:flow/cc7b2d97-bdc2-4823-a9e2-f716ce65254e/v10 ef:flow/cc7b2d97-bdc2-4823-a9e2-f716ce65254e/v11
ef:activity/change/20260821T1554374006150000/264284 altLabel ef:agent/consensus_match ef:flow/cc7b2d97-bdc2-4823-a9e2-f716ce65254e/v11 ef:flow/cc7b2d97-bdc2-4823-a9e2-f716ce65254e/v12
ef:activity/change/20260821T1554374006150000/264285 cas_match_labels ef:agent/consensus_match ef:flow/cc7b2d97-bdc2-4823-a9e2-f716ce65254e/v12 ef:flow/cc7b2d97-bdc2-4823-a9e2-f716ce65254e/v13
ef:activity/change/20260821T1554374006150000/278418 properties ef:agent/opsin_iupac ef:flow/cc7b2d97-bdc2-4823-a9e2-f716ce65254e/v13 ef:flow/cc7b2d97-bdc2-4823-a9e2-f716ce65254e/v14
ef:activity/change/20260821T1554374006150000/285178 properties ef:agent/rdkit_post_consensus ef:flow/cc7b2d97-bdc2-4823-a9e2-f716ce65254e/v14 ef:flow/cc7b2d97-bdc2-4823-a9e2-f716ce65254e/v15
ef:activity/change/20260821T1554374006150000/290912 altLabel ef:agent/strip_catalogue_altlabels ef:flow/cc7b2d97-bdc2-4823-a9e2-f716ce65254e/v15 ef:flow/cc7b2d97-bdc2-4823-a9e2-f716ce65254e/v16
ef:activity/change/20260821T1554374006150000/366479 concept_associations ef:agent/carry_associations_onto_flows ef:flow/cc7b2d97-bdc2-4823-a9e2-f716ce65254e/v16 ef:flow/cc7b2d97-bdc2-4823-a9e2-f716ce65254e/v17
ef:activity/change/20260821T1554374006150000/392784 properties ef:agent/normalise_property_values ef:flow/cc7b2d97-bdc2-4823-a9e2-f716ce65254e/v17 ef:flow/cc7b2d97-bdc2-4823-a9e2-f716ce65254e/v18
ef:activity/change/20260821T1554374006150000/401414 types ef:agent/link_flows_to_their_substance ef:flow/cc7b2d97-bdc2-4823-a9e2-f716ce65254e/v18 ef:flow/cc7b2d97-bdc2-4823-a9e2-f716ce65254e/v19

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