Brightway Flows 1.0
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By field

14 fields
Field Changes Written by Latest note
properties 5 enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus the substance's answer, copied onto its flow
prefLabel 3 bootstrap_labels, flow_layers.pubchem_element_enrichment, normalize_name_case element name from the flow object: Polonium
altLabel 2 chebi_altlabels, consensus_match group_key=polonium||dimension=Resource > media=Ground; cas=7440-08-6; added Common Chemistry CAS names as altLabel: MeSH ID: D011059; object_uuid=fo-5380186418f7577b
cas_match_labels 1 consensus_match group_key=polonium||dimension=Resource > media=Ground; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'7440-08-6': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-5380186418f7577b: {'7440-08-6': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Resources > Resources from ground > Non-renewable element resources from ground
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Resources > Resources from ground > Non-renewable element resources from ground
ec_numbers 1 ec_cross_check Resolved from EC-inventory: 231-118-2 from CAS 7440-08-6
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['7440-08-6']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_33313']; candidate_pubchem_cids=[6328143]; selected_pubchem_cids=[6328143]; formula_similarity_expected=['Po']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

21
# Step Field From To Why
25,143 bootstrap_labels prefLabel — [{"@value":"polonium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"brigh… Bootstrapped prefLabel from legacy name field
25,144 bootstrap_labels name polonium — Purged legacy name field to enforce prefLabel usage
25,145 bootstrap_labels synonyms ["84Po","AC1O3H01","polonio"] [] Removed legacy synonyms field in favor of structured labels
171,337 default_context_mapping context — {"dimension":"Resource","media":"Ground"} Mapped from context mapping for source=EF 3.1, source context Resources > Resources from ground > Non-renewable element resources from ground
171,338 default_context_mapping context_iri — https://vocab.brightway.one/flow-contexts/reso-grou Mapped from context mapping for source=EF 3.1, source context Resources > Resources from ground > Non-renewable element resources from ground
220,945 unit_normalization unit_iri — https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
226,544 normalize_name_case prefLabel [{"@value":"polonium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"brigh… [{"@value":"Polonium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"brigh… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
227,121 ec_cross_check ec_numbers [] ["231-118-2"] Resolved from EC-inventory: 231-118-2 from CAS 7440-08-6
248,159 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Po"],"atte… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
248,160 enrich_references skos_definition — [{"@value":"A radioactive metallic element discovered in 1898 by Marie Sklodowska Curie and named after her home countr… Merged ChEBI/PubChem definitions into skos:definition
248,161 enrich_references references [] [{"@id":"gmelin:40435","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"brig… Added references with provenance; cas_numbers=['7440-08-6']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_33313']; candidate_pubchem_cids=[6328143]; selected_pubchem_cids=[6328143]; formula_similarity_expected=['Po']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
257,377 chebi_altlabels altLabel [] [{"@value":"84Po","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"brightway-… Added 3 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
270,797 consensus_match altLabel [{"@value":"84Po","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"brightway-… [{"@value":"84Po","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"brightway-… group_key=polonium||dimension=Resource > media=Ground; cas=7440-08-6; added Common Chemistry CAS names as altLabel: MeSH ID: D011059; object_uuid=fo-5380186418f7577b
270,798 consensus_match cas_match_labels — {"7440-08-6":"exactMatch"} group_key=polonium||dimension=Resource > media=Ground; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'7440-08-6': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-5380186418f7577b: {'7440-08-6': 'exactMatch'}
279,701 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Po"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Po"],"atte… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Polonium'
286,590 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Po"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Po"],"atte… rdkit_post_consensus from '[Po]'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
366,726 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/cd375ebd-60f8-… associations resolved on the elementary layer
394,128 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Po"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Po"],"atte… typed the way the ontology types it
403,594 link_flows_to_their_substance types — ["https://w3id.org/chemrof/ChemicalElement"] the substance's answer, copied onto its flow
403,595 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Po"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Po"],"atte… the substance's answer, copied onto its flow
403,869 flow_layers.pubchem_element_enrichment prefLabel [{"@value":"Polonium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"brigh… [{"@value":"Polonium","@language":"en","@lang":"en","source":{"prov:wasGeneratedBy":"flow_layers.pubchem_element_enrich… element name from the flow object: Polonium

PROV-O trail

21 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20261019T0712047113160000/25143 prefLabel ef:agent/bootstrap_labels ef:flow/cd375ebd-60f8-4260-b1bd-41b2840376cf/v0 ef:flow/cd375ebd-60f8-4260-b1bd-41b2840376cf/v1
ef:activity/change/20261019T0712047113160000/25144 name ef:agent/bootstrap_labels ef:flow/cd375ebd-60f8-4260-b1bd-41b2840376cf/v1 ef:flow/cd375ebd-60f8-4260-b1bd-41b2840376cf/v2
ef:activity/change/20261019T0712047113160000/25145 synonyms ef:agent/bootstrap_labels ef:flow/cd375ebd-60f8-4260-b1bd-41b2840376cf/v2 ef:flow/cd375ebd-60f8-4260-b1bd-41b2840376cf/v3
ef:activity/change/20261019T0712047113160000/171337 context ef:agent/default_context_mapping ef:flow/cd375ebd-60f8-4260-b1bd-41b2840376cf/v3 ef:flow/cd375ebd-60f8-4260-b1bd-41b2840376cf/v4
ef:activity/change/20261019T0712047113160000/171338 context_iri ef:agent/default_context_mapping ef:flow/cd375ebd-60f8-4260-b1bd-41b2840376cf/v4 ef:flow/cd375ebd-60f8-4260-b1bd-41b2840376cf/v5
ef:activity/change/20261019T0712047113160000/220945 unit_iri ef:agent/unit_normalization ef:flow/cd375ebd-60f8-4260-b1bd-41b2840376cf/v5 ef:flow/cd375ebd-60f8-4260-b1bd-41b2840376cf/v6
ef:activity/change/20261019T0712047113160000/226544 prefLabel ef:agent/normalize_name_case ef:flow/cd375ebd-60f8-4260-b1bd-41b2840376cf/v6 ef:flow/cd375ebd-60f8-4260-b1bd-41b2840376cf/v7
ef:activity/change/20261019T0712047113160000/227121 ec_numbers ef:agent/ec_cross_check ef:flow/cd375ebd-60f8-4260-b1bd-41b2840376cf/v7 ef:flow/cd375ebd-60f8-4260-b1bd-41b2840376cf/v8
ef:activity/change/20261019T0712047113160000/248159 properties ef:agent/enrich_references ef:flow/cd375ebd-60f8-4260-b1bd-41b2840376cf/v8 ef:flow/cd375ebd-60f8-4260-b1bd-41b2840376cf/v9
ef:activity/change/20261019T0712047113160000/248160 skos_definition ef:agent/enrich_references ef:flow/cd375ebd-60f8-4260-b1bd-41b2840376cf/v9 ef:flow/cd375ebd-60f8-4260-b1bd-41b2840376cf/v10
ef:activity/change/20261019T0712047113160000/248161 references ef:agent/enrich_references ef:flow/cd375ebd-60f8-4260-b1bd-41b2840376cf/v10 ef:flow/cd375ebd-60f8-4260-b1bd-41b2840376cf/v11
ef:activity/change/20261019T0712047113160000/257377 altLabel ef:agent/chebi_altlabels ef:flow/cd375ebd-60f8-4260-b1bd-41b2840376cf/v11 ef:flow/cd375ebd-60f8-4260-b1bd-41b2840376cf/v12
ef:activity/change/20261019T0712047113160000/270797 altLabel ef:agent/consensus_match ef:flow/cd375ebd-60f8-4260-b1bd-41b2840376cf/v12 ef:flow/cd375ebd-60f8-4260-b1bd-41b2840376cf/v13
ef:activity/change/20261019T0712047113160000/270798 cas_match_labels ef:agent/consensus_match ef:flow/cd375ebd-60f8-4260-b1bd-41b2840376cf/v13 ef:flow/cd375ebd-60f8-4260-b1bd-41b2840376cf/v14
ef:activity/change/20261019T0712047113160000/279701 properties ef:agent/opsin_iupac ef:flow/cd375ebd-60f8-4260-b1bd-41b2840376cf/v14 ef:flow/cd375ebd-60f8-4260-b1bd-41b2840376cf/v15
ef:activity/change/20261019T0712047113160000/286590 properties ef:agent/rdkit_post_consensus ef:flow/cd375ebd-60f8-4260-b1bd-41b2840376cf/v15 ef:flow/cd375ebd-60f8-4260-b1bd-41b2840376cf/v16
ef:activity/change/20261019T0712047113160000/366726 concept_associations ef:agent/carry_associations_onto_flows ef:flow/cd375ebd-60f8-4260-b1bd-41b2840376cf/v16 ef:flow/cd375ebd-60f8-4260-b1bd-41b2840376cf/v17
ef:activity/change/20261019T0712047113160000/394128 properties ef:agent/normalise_property_values ef:flow/cd375ebd-60f8-4260-b1bd-41b2840376cf/v17 ef:flow/cd375ebd-60f8-4260-b1bd-41b2840376cf/v18
ef:activity/change/20261019T0712047113160000/403594 types ef:agent/link_flows_to_their_substance ef:flow/cd375ebd-60f8-4260-b1bd-41b2840376cf/v18 ef:flow/cd375ebd-60f8-4260-b1bd-41b2840376cf/v19
ef:activity/change/20261019T0712047113160000/403595 properties ef:agent/link_flows_to_their_substance ef:flow/cd375ebd-60f8-4260-b1bd-41b2840376cf/v19 ef:flow/cd375ebd-60f8-4260-b1bd-41b2840376cf/v20
ef:activity/change/20261019T0712047113160000/403869 prefLabel ef:agent/flow_layers.pubchem_element_enrichment ef:flow/cd375ebd-60f8-4260-b1bd-41b2840376cf/v20 ef:flow/cd375ebd-60f8-4260-b1bd-41b2840376cf/v21

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