Bixin
Everything that changed this flow. Back to the flow
cd8ea856-0635-460a-9777-d7baa5a8993c
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 6 | enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | the substance's answer, copied onto its flow |
| altLabel | 4 | chebi_altlabels, consensus_match, dedupe_altlabels | Deduplicated altLabel values and removed entries matching prefLabel |
| prefLabel | 3 | bootstrap_labels, consensus_match, normalize_name_case | cas=6983-79-5; cc_chebi_agreed_name='Bixin'; object_uuid=fo-61d76a2dc7d841a8 |
| cas_match_labels | 1 | consensus_match | group_key=methyl(9-cis)-hydrogen-6,6'-diapo-ψ,ψ-carotenedioate||dimension=Environmental > media=Air > strata=Long-term; group_sources=['chebi', 'ec_inventory']; cas_sources={'6983-79-5': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-61d76a2dc7d841a8: {'6983-79-5': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['6983-79-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_3136']; candidate_pubchem_cids=[91556, 5281226, 6376436, 6537494, 9953290, 133112837, 134688154, 163199003, 170923611, 177784478]; selected_pubchem_cids=[5281226]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
23| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 11,305 | bootstrap_labels | prefLabel | — | [{"@value":"methyl (9-cis)-hydrogen-6,6'-diapo-ψ,ψ-carotenedioate","@language":"en","source":{"prov:wasGeneratedBy":"bo… | Bootstrapped prefLabel from legacy name field |
| 11,306 | bootstrap_labels | name | methyl (9-cis)-hydrogen-6,6'-diapo-ψ,ψ-carotenedioate | — | Purged legacy name field to enforce prefLabel usage |
| 11,307 | bootstrap_labels | synonyms | ["(2E,4E,6E,8E,10E,12E,14E,16Z,18E)-20-methoxy-4,8,13,17-tetramethyl-20-oxoicosa-2,4,6,8,10,12,14,16,18-nonaenoic acid"… | [] | Removed legacy synonyms field in favor of structured labels |
| 171,532 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Medium stack, <150 meters","population_density":"Rural (<1000 peop… | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks |
| 171,533 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-mest15me-ru10pesq | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks |
| 217,086 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 223,732 | normalize_name_case | prefLabel | [{"@value":"methyl (9-cis)-hydrogen-6,6'-diapo-ψ,ψ-carotenedioate","@language":"en","source":{"prov:wasGeneratedBy":"bo… | [{"@value":"Methyl (9-cis)-hydrogen-6,6'-diapo-ψ,ψ-carotenedioate","@language":"en","source":{"prov:wasGeneratedBy":"bo… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 237,930 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C25H30O4"]… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 237,931 | enrich_references | skos_definition | — | [{"@value":"A carotenoic acid that is the 6'-monomethyl ester of 9'-cis-6,6'-diapocarotene-6,6'-dioic acid.","@language… | Merged ChEBI/PubChem definitions into skos:definition |
| 237,932 | enrich_references | references | [] | [{"@id":"agr:IND44366642","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"c… | Added references with provenance; cas_numbers=['6983-79-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_3136']; candidate_pubchem_cids=[91556, 5281226, 6376436, 6537494, 9953290, 133112837, 134688154, 163199003, 170923611, 177784478]; selected_pubchem_cids=[5281226]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 251,406 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C25H30O4"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C25H30O4"]… | rdkit_pre_consensus from 'C/C(=C\\C=C\\C=C(/C)\\C=C\\C=C(\\C)/C=C/C(=O)OC)/C=C/C=C(\\C)/C=C/C(=O)O'; added: monoisotopic_mass |
| 255,954 | chebi_altlabels | altLabel | [] | [{"@value":"(2E,4E,6E,8E,10E,12E,14E,16Z,18E)-20-methoxy-4,8,13,17-tetramethyl-20-oxoicosa-2,4,6,8,10,12,14,16,18-nonae… | Added 5 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 268,700 | consensus_match | prefLabel | [{"@value":"Methyl (9-cis)-hydrogen-6,6'-diapo-ψ,ψ-carotenedioate","@language":"en","source":{"prov:wasGeneratedBy":"bo… | [{"@value":"Bixin","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"consensus… | cas=6983-79-5; cc_chebi_agreed_name='Bixin'; object_uuid=fo-61d76a2dc7d841a8 |
| 268,701 | consensus_match | altLabel | [{"@value":"(2E,4E,6E,8E,10E,12E,14E,16Z,18E)-20-methoxy-4,8,13,17-tetramethyl-20-oxoicosa-2,4,6,8,10,12,14,16,18-nonae… | [{"@value":"(2E,4E,6E,8E,10E,12E,14E,16Z,18E)-20-methoxy-4,8,13,17-tetramethyl-20-oxoicosa-2,4,6,8,10,12,14,16,18-nonae… | cas=6983-79-5; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-61d76a2dc7d841a8 |
| 268,702 | consensus_match | altLabel | [{"@value":"(2E,4E,6E,8E,10E,12E,14E,16Z,18E)-20-methoxy-4,8,13,17-tetramethyl-20-oxoicosa-2,4,6,8,10,12,14,16,18-nonae… | [{"@value":"(2E,4E,6E,8E,10E,12E,14E,16Z,18E)-20-methoxy-4,8,13,17-tetramethyl-20-oxoicosa-2,4,6,8,10,12,14,16,18-nonae… | group_key=methyl(9-cis)-hydrogen-6,6'-diapo-ψ,ψ-carotenedioate||dimension=Environmental > media=Air > strata=Long-term; cas=6983-79-5; added Common Chemistry CAS names as altLabel: 2,4,6,8,10,12,14,16,18-Eicosanonaenedioic acid, 4,8,13,17-tetramethyl-, 1-methyl ester, (2<em>E</em>,4<em>Z</em>,6<em>E</em>,8<em>E</em>,10<em>E</em>,12<em>E</em>,14<em>E</em>,16<em>E</em>,18<em>E</em>)-, 2,4,6,8,10,12,14,16,18-Eicosanonaenedioic acid, 4,8,13,17-tetramethyl-, monomethyl ester, (2<em>E</em>,4<em>Z</em>,6<em>E</em>,8<em>E</em>,10<em>E</em>,12<em>E</em>,14<em>E</em>,16<em>E</em>,18<em>E</em>)-, 6,6′-Diapo-ψ,ψ-carotenedioic acid, 6-methyl ester, 9-<em>cis</em>-, 9′-<em>cis</em>-Bixin, <em>cis</em>-Bixin, AlcabixP, Bixin, <em>cis</em>-, Bixinol, α-Bixin; object_uuid=fo-61d76a2dc7d841a8 |
| 268,703 | consensus_match | cas_match_labels | — | {"6983-79-5":"exactMatch"} | group_key=methyl(9-cis)-hydrogen-6,6'-diapo-ψ,ψ-carotenedioate||dimension=Environmental > media=Air > strata=Long-term; group_sources=['chebi', 'ec_inventory']; cas_sources={'6983-79-5': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-61d76a2dc7d841a8: {'6983-79-5': 'exactMatch'} |
| 276,585 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C25H30O4"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C25H30O4"]… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '2,4,6,8,10,12,14,16,18-Eicosanonaenedioic acid, 4,8,13,17-tetramethyl-, 1-methyl ester, (2E,4Z,6E,8E,10E,12E,14E,16E,18E)-' |
| 283,204 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C25H30O4"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C25H29O4-"… | rdkit_post_consensus from 'COC(=O)/C=C/C(C)=C\\C=C\\C(C)=C\\C=C\\C=C(C)\\C=C\\C=C(C)\\C=C\\C(=O)[O-]'; added: inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass; confirmed: smiles_string, inchi2d_string |
| 292,566 | dedupe_altlabels | altLabel | [{"@value":"(2E,4E,6E,8E,10E,12E,14E,16Z,18E)-20-methoxy-4,8,13,17-tetramethyl-20-oxoicosa-2,4,6,8,10,12,14,16,18-nonae… | [{"@value":"(2E,4E,6E,8E,10E,12E,14E,16Z,18E)-20-methoxy-4,8,13,17-tetramethyl-20-oxoicosa-2,4,6,8,10,12,14,16,18-nonae… | Deduplicated altLabel values and removed entries matching prefLabel |
| 366,790 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/cd8ea856-0635-… | associations resolved on the elementary layer |
| 390,940 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C25H29O4-"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C25H29O4-"… | typed the way the ontology types it |
| 398,770 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
| 398,771 | link_flows_to_their_substance | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C25H29O4-"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C25H29O4-"… | the substance's answer, copied onto its flow |
PROV-O trail
23 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260822T0600486828500000/11305 | prefLabel | ef:agent/bootstrap_labels | ef:flow/cd8ea856-0635-460a-9777-d7baa5a8993c/v0 | ef:flow/cd8ea856-0635-460a-9777-d7baa5a8993c/v1 |
| ef:activity/change/20260822T0600486828500000/11306 | name | ef:agent/bootstrap_labels | ef:flow/cd8ea856-0635-460a-9777-d7baa5a8993c/v1 | ef:flow/cd8ea856-0635-460a-9777-d7baa5a8993c/v2 |
| ef:activity/change/20260822T0600486828500000/11307 | synonyms | ef:agent/bootstrap_labels | ef:flow/cd8ea856-0635-460a-9777-d7baa5a8993c/v2 | ef:flow/cd8ea856-0635-460a-9777-d7baa5a8993c/v3 |
| ef:activity/change/20260822T0600486828500000/171532 | context | ef:agent/default_context_mapping | ef:flow/cd8ea856-0635-460a-9777-d7baa5a8993c/v3 | ef:flow/cd8ea856-0635-460a-9777-d7baa5a8993c/v4 |
| ef:activity/change/20260822T0600486828500000/171533 | context_iri | ef:agent/default_context_mapping | ef:flow/cd8ea856-0635-460a-9777-d7baa5a8993c/v4 | ef:flow/cd8ea856-0635-460a-9777-d7baa5a8993c/v5 |
| ef:activity/change/20260822T0600486828500000/217086 | unit_iri | ef:agent/unit_normalization | ef:flow/cd8ea856-0635-460a-9777-d7baa5a8993c/v5 | ef:flow/cd8ea856-0635-460a-9777-d7baa5a8993c/v6 |
| ef:activity/change/20260822T0600486828500000/223732 | prefLabel | ef:agent/normalize_name_case | ef:flow/cd8ea856-0635-460a-9777-d7baa5a8993c/v6 | ef:flow/cd8ea856-0635-460a-9777-d7baa5a8993c/v7 |
| ef:activity/change/20260822T0600486828500000/237930 | properties | ef:agent/enrich_references | ef:flow/cd8ea856-0635-460a-9777-d7baa5a8993c/v7 | ef:flow/cd8ea856-0635-460a-9777-d7baa5a8993c/v8 |
| ef:activity/change/20260822T0600486828500000/237931 | skos_definition | ef:agent/enrich_references | ef:flow/cd8ea856-0635-460a-9777-d7baa5a8993c/v8 | ef:flow/cd8ea856-0635-460a-9777-d7baa5a8993c/v9 |
| ef:activity/change/20260822T0600486828500000/237932 | references | ef:agent/enrich_references | ef:flow/cd8ea856-0635-460a-9777-d7baa5a8993c/v9 | ef:flow/cd8ea856-0635-460a-9777-d7baa5a8993c/v10 |
| ef:activity/change/20260822T0600486828500000/251406 | properties | ef:agent/rdkit_pre_consensus | ef:flow/cd8ea856-0635-460a-9777-d7baa5a8993c/v10 | ef:flow/cd8ea856-0635-460a-9777-d7baa5a8993c/v11 |
| ef:activity/change/20260822T0600486828500000/255954 | altLabel | ef:agent/chebi_altlabels | ef:flow/cd8ea856-0635-460a-9777-d7baa5a8993c/v11 | ef:flow/cd8ea856-0635-460a-9777-d7baa5a8993c/v12 |
| ef:activity/change/20260822T0600486828500000/268700 | prefLabel | ef:agent/consensus_match | ef:flow/cd8ea856-0635-460a-9777-d7baa5a8993c/v12 | ef:flow/cd8ea856-0635-460a-9777-d7baa5a8993c/v13 |
| ef:activity/change/20260822T0600486828500000/268701 | altLabel | ef:agent/consensus_match | ef:flow/cd8ea856-0635-460a-9777-d7baa5a8993c/v13 | ef:flow/cd8ea856-0635-460a-9777-d7baa5a8993c/v14 |
| ef:activity/change/20260822T0600486828500000/268702 | altLabel | ef:agent/consensus_match | ef:flow/cd8ea856-0635-460a-9777-d7baa5a8993c/v14 | ef:flow/cd8ea856-0635-460a-9777-d7baa5a8993c/v15 |
| ef:activity/change/20260822T0600486828500000/268703 | cas_match_labels | ef:agent/consensus_match | ef:flow/cd8ea856-0635-460a-9777-d7baa5a8993c/v15 | ef:flow/cd8ea856-0635-460a-9777-d7baa5a8993c/v16 |
| ef:activity/change/20260822T0600486828500000/276585 | properties | ef:agent/opsin_iupac | ef:flow/cd8ea856-0635-460a-9777-d7baa5a8993c/v16 | ef:flow/cd8ea856-0635-460a-9777-d7baa5a8993c/v17 |
| ef:activity/change/20260822T0600486828500000/283204 | properties | ef:agent/rdkit_post_consensus | ef:flow/cd8ea856-0635-460a-9777-d7baa5a8993c/v17 | ef:flow/cd8ea856-0635-460a-9777-d7baa5a8993c/v18 |
| ef:activity/change/20260822T0600486828500000/292566 | altLabel | ef:agent/dedupe_altlabels | ef:flow/cd8ea856-0635-460a-9777-d7baa5a8993c/v18 | ef:flow/cd8ea856-0635-460a-9777-d7baa5a8993c/v19 |
| ef:activity/change/20260822T0600486828500000/366790 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/cd8ea856-0635-460a-9777-d7baa5a8993c/v19 | ef:flow/cd8ea856-0635-460a-9777-d7baa5a8993c/v20 |
| ef:activity/change/20260822T0600486828500000/390940 | properties | ef:agent/normalise_property_values | ef:flow/cd8ea856-0635-460a-9777-d7baa5a8993c/v20 | ef:flow/cd8ea856-0635-460a-9777-d7baa5a8993c/v21 |
| ef:activity/change/20260822T0600486828500000/398770 | types | ef:agent/link_flows_to_their_substance | ef:flow/cd8ea856-0635-460a-9777-d7baa5a8993c/v21 | ef:flow/cd8ea856-0635-460a-9777-d7baa5a8993c/v22 |
| ef:activity/change/20260822T0600486828500000/398771 | properties | ef:agent/link_flows_to_their_substance | ef:flow/cd8ea856-0635-460a-9777-d7baa5a8993c/v22 | ef:flow/cd8ea856-0635-460a-9777-d7baa5a8993c/v23 |