Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 1 catalogue altLabel value(s): 'NSC 77541' (registry code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=indometacin||dimension=Environmental > media=Ground > geography=Non-agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'53-86-1': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-ebf643ffcf2089c3: {'53-86-1': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['53-86-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_49662']; candidate_pubchem_cids=[3715, 6957647, 12406853]; selected_pubchem_cids=[3715]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
roles 1 link_flows_to_their_substance the substance's answer, copied onto its flow
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

21
# Step Field From To Why
18,513 bootstrap_labels prefLabel [{"@value":"indometacin","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"co… Bootstrapped prefLabel from legacy name field
18,514 bootstrap_labels name indometacin Purged legacy name field to enforce prefLabel usage
18,515 bootstrap_labels synonyms ["(1-p-Chlorobenzoyl-5-methoxy-2-methylindol-3-yl)acetic acid","1-(4-Chlorobenzoyl)-5-methoxy-2-methyl-1H-indole-3-acet… [] Removed legacy synonyms field in favor of structured labels
172,234 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Agricultural"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
172,235 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-agri Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
219,389 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
225,310 normalize_name_case prefLabel [{"@value":"indometacin","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"co… [{"@value":"Indometacin","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"co… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
244,471 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C19H16ClNO… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
244,472 enrich_references skos_definition [{"@value":"A member of the class of indole-3-acetic acids that is indole-3-acetic acid in which the indole ring is sub… Merged ChEBI/PubChem definitions into skos:definition
244,473 enrich_references references [] [{"@id":"beilstein:497341","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"… Added references with provenance; cas_numbers=['53-86-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_49662']; candidate_pubchem_cids=[3715, 6957647, 12406853]; selected_pubchem_cids=[3715]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
253,301 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C19H16ClNO… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C19H16ClNO… rdkit_pre_consensus from 'CC1=C(C2=C(N1C(=O)C3=CC=C(C=C3)Cl)C=CC(=C2)OC)CC(=O)O'; added: monoisotopic_mass
256,810 chebi_altlabels altLabel [] [{"@value":"1-(p-chlorobenzoyl)-5-methoxy-2-methylindole-3-acetic acid","@language":"en","source":{"prov:wasGeneratedBy… Added 9 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
267,962 consensus_match altLabel [{"@value":"1-(p-chlorobenzoyl)-5-methoxy-2-methylindole-3-acetic acid","@language":"en","source":{"prov:wasGeneratedBy… [{"@value":"1-(p-chlorobenzoyl)-5-methoxy-2-methylindole-3-acetic acid","@language":"en","source":{"prov:wasGeneratedBy… group_key=indometacin||dimension=Environmental > media=Ground > geography=Non-agricultural; cas=53-86-1; added Common Chemistry CAS names as altLabel: 1-(4-Chlorobenzoyl)-2-methyl-5-methoxyindole-3-acetic acid, 1-(4-Chlorobenzoyl)-5-methoxy-2-methyl-1<em>H</em>-indole-3-acetic acid, 1-(4-Chlorobenzoyl)-5-methoxy-2-methylindole-3-acetic acid, 1-(<em>p</em>-Chlorobenzoyl)-2-methyl-5-methoxy-3-indolylacetic acid, 1-(<em>p</em>-Chlorobenzoyl)-2-methyl-5-methoxyindole-3-acetic acid, 1-(<em>p</em>-Chlorobenzoyl)-5-methoxy-2-methyl-3-indolylacetic acid, 1<em>H</em>-Indole-3-acetic acid, 1-(4-chlorobenzoyl)-5-methoxy-2-methyl-, 2-[1-(4-Chlorobenzoyl)-5-methoxy-2-methyl-1<em>H</em>-indol-3-yl]acetic acid, 2-[1-(4-Chlorobenzoyl)-5-methoxy-2-methylindol-3-yl]acetic acid, 2-[1-[(4-Chlorophenyl)carbonyl]-5-methoxy-2-methyl-1<em>H</em>-indol-3-yl]acetic acid, <em>N</em>-(<em>p</em>-Chlorobenzoyl)-2-methyl-5-methoxy-3-indolylacetic acid, Amuno, Argun, Artracin, Artrinovo, Artrivia, Bonidin, Bonidon Gel, Catlep, Chibro-Amuno, Chrono-Indicid, Chrono-Indocid 75, Confortid, Dolcidium, Dolcidium PL, Dolovin, Durametacin, Elmetacin, Endol, Flam, Globa, IMC, Idomethine, Imbrilon, Inacid, Indacin, Indo-Phlogont, Indo-Rectolmin, Indo-Tablinen, IndoRich, Indocid, Indocid (pharmaceutical), Indocin IV, Indocine, Indocollyre, Indole-3-acetic acid, 1-(<em>p</em>-chlorobenzoyl)-5-methoxy-2-methyl-, Indomecol, Indomed, Indomee, Indomethacine, Indomethine, Indomod, Indonol, Indoptic, Indoptol, Indorektal, Indoxen, Indren, Inflazon, Infrocin, Innamit, Inteban, Inteban SP, Lausit, MeSH ID: D007213, Metacen, Metartril, Methazine, Metindol, Mezolin, Microcid, Mikametan, Mobilan, NSC 77541, Reumacide, Rheumacin LA, Sadoreum, Tannex, Vital Vitacid, Vonum, α-[1-(<em>p</em>-Chlorobenzoyl)-2-methyl-5-methoxy-3-indolyl]acetic acid; object_uuid=fo-ebf643ffcf2089c3
267,963 consensus_match cas_match_labels {"53-86-1":"exactMatch"} group_key=indometacin||dimension=Environmental > media=Ground > geography=Non-agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'53-86-1': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-ebf643ffcf2089c3: {'53-86-1': 'exactMatch'}
278,511 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C19H16ClNO… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C19H16ClNO… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '1-(p-chlorobenzoyl)-5-methoxy-2-methylindole-3-acetic acid'
285,278 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C19H16ClNO… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C19H16ClNO… rdkit_post_consensus from 'COc1ccc2c(c1)c(CC(=O)O)c(C)n2C(=O)c1ccc(Cl)cc1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
290,981 strip_catalogue_altlabels altLabel [{"@value":"1-(p-chlorobenzoyl)-5-methoxy-2-methylindole-3-acetic acid","@language":"en","source":{"prov:wasGeneratedBy… [{"@value":"1-(p-chlorobenzoyl)-5-methoxy-2-methylindole-3-acetic acid","@language":"en","source":{"prov:wasGeneratedBy… Removed 1 catalogue altLabel value(s): 'NSC 77541' (registry code)
367,141 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/ceeea685-c69b-… associations resolved on the elementary layer
392,878 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C19H16ClNO… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C19H16ClNO… typed the way the ontology types it
401,555 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
401,556 link_flows_to_their_substance roles [{"@id":"http://purl.obolibrary.org/obo/CHEBI_78298","rdfs:label":"environmental contaminant","http://www.w3.org/2004/0… the substance's answer, copied onto its flow

PROV-O trail

21 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260822T0600486828500000/18513 prefLabel ef:agent/bootstrap_labels ef:flow/ceeea685-c69b-4e73-9eaa-59b4b184ec25/v0 ef:flow/ceeea685-c69b-4e73-9eaa-59b4b184ec25/v1
ef:activity/change/20260822T0600486828500000/18514 name ef:agent/bootstrap_labels ef:flow/ceeea685-c69b-4e73-9eaa-59b4b184ec25/v1 ef:flow/ceeea685-c69b-4e73-9eaa-59b4b184ec25/v2
ef:activity/change/20260822T0600486828500000/18515 synonyms ef:agent/bootstrap_labels ef:flow/ceeea685-c69b-4e73-9eaa-59b4b184ec25/v2 ef:flow/ceeea685-c69b-4e73-9eaa-59b4b184ec25/v3
ef:activity/change/20260822T0600486828500000/172234 context ef:agent/default_context_mapping ef:flow/ceeea685-c69b-4e73-9eaa-59b4b184ec25/v3 ef:flow/ceeea685-c69b-4e73-9eaa-59b4b184ec25/v4
ef:activity/change/20260822T0600486828500000/172235 context_iri ef:agent/default_context_mapping ef:flow/ceeea685-c69b-4e73-9eaa-59b4b184ec25/v4 ef:flow/ceeea685-c69b-4e73-9eaa-59b4b184ec25/v5
ef:activity/change/20260822T0600486828500000/219389 unit_iri ef:agent/unit_normalization ef:flow/ceeea685-c69b-4e73-9eaa-59b4b184ec25/v5 ef:flow/ceeea685-c69b-4e73-9eaa-59b4b184ec25/v6
ef:activity/change/20260822T0600486828500000/225310 prefLabel ef:agent/normalize_name_case ef:flow/ceeea685-c69b-4e73-9eaa-59b4b184ec25/v6 ef:flow/ceeea685-c69b-4e73-9eaa-59b4b184ec25/v7
ef:activity/change/20260822T0600486828500000/244471 properties ef:agent/enrich_references ef:flow/ceeea685-c69b-4e73-9eaa-59b4b184ec25/v7 ef:flow/ceeea685-c69b-4e73-9eaa-59b4b184ec25/v8
ef:activity/change/20260822T0600486828500000/244472 skos_definition ef:agent/enrich_references ef:flow/ceeea685-c69b-4e73-9eaa-59b4b184ec25/v8 ef:flow/ceeea685-c69b-4e73-9eaa-59b4b184ec25/v9
ef:activity/change/20260822T0600486828500000/244473 references ef:agent/enrich_references ef:flow/ceeea685-c69b-4e73-9eaa-59b4b184ec25/v9 ef:flow/ceeea685-c69b-4e73-9eaa-59b4b184ec25/v10
ef:activity/change/20260822T0600486828500000/253301 properties ef:agent/rdkit_pre_consensus ef:flow/ceeea685-c69b-4e73-9eaa-59b4b184ec25/v10 ef:flow/ceeea685-c69b-4e73-9eaa-59b4b184ec25/v11
ef:activity/change/20260822T0600486828500000/256810 altLabel ef:agent/chebi_altlabels ef:flow/ceeea685-c69b-4e73-9eaa-59b4b184ec25/v11 ef:flow/ceeea685-c69b-4e73-9eaa-59b4b184ec25/v12
ef:activity/change/20260822T0600486828500000/267962 altLabel ef:agent/consensus_match ef:flow/ceeea685-c69b-4e73-9eaa-59b4b184ec25/v12 ef:flow/ceeea685-c69b-4e73-9eaa-59b4b184ec25/v13
ef:activity/change/20260822T0600486828500000/267963 cas_match_labels ef:agent/consensus_match ef:flow/ceeea685-c69b-4e73-9eaa-59b4b184ec25/v13 ef:flow/ceeea685-c69b-4e73-9eaa-59b4b184ec25/v14
ef:activity/change/20260822T0600486828500000/278511 properties ef:agent/opsin_iupac ef:flow/ceeea685-c69b-4e73-9eaa-59b4b184ec25/v14 ef:flow/ceeea685-c69b-4e73-9eaa-59b4b184ec25/v15
ef:activity/change/20260822T0600486828500000/285278 properties ef:agent/rdkit_post_consensus ef:flow/ceeea685-c69b-4e73-9eaa-59b4b184ec25/v15 ef:flow/ceeea685-c69b-4e73-9eaa-59b4b184ec25/v16
ef:activity/change/20260822T0600486828500000/290981 altLabel ef:agent/strip_catalogue_altlabels ef:flow/ceeea685-c69b-4e73-9eaa-59b4b184ec25/v16 ef:flow/ceeea685-c69b-4e73-9eaa-59b4b184ec25/v17
ef:activity/change/20260822T0600486828500000/367141 concept_associations ef:agent/carry_associations_onto_flows ef:flow/ceeea685-c69b-4e73-9eaa-59b4b184ec25/v17 ef:flow/ceeea685-c69b-4e73-9eaa-59b4b184ec25/v18
ef:activity/change/20260822T0600486828500000/392878 properties ef:agent/normalise_property_values ef:flow/ceeea685-c69b-4e73-9eaa-59b4b184ec25/v18 ef:flow/ceeea685-c69b-4e73-9eaa-59b4b184ec25/v19
ef:activity/change/20260822T0600486828500000/401555 types ef:agent/link_flows_to_their_substance ef:flow/ceeea685-c69b-4e73-9eaa-59b4b184ec25/v19 ef:flow/ceeea685-c69b-4e73-9eaa-59b4b184ec25/v20
ef:activity/change/20260822T0600486828500000/401556 roles ef:agent/link_flows_to_their_substance ef:flow/ceeea685-c69b-4e73-9eaa-59b4b184ec25/v20 ef:flow/ceeea685-c69b-4e73-9eaa-59b4b184ec25/v21

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