Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 4 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 4 catalogue altLabel value(s): 'NSC 3710' (registry code), 'Radia 7984' (trade name), 'Witconol 1095' (trade name), 'Witconol 2309' (trade name)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=methyloctanoate||dimension=Environmental > media=Ground > geography=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'111-11-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-99cd8852b492dc96: {'111-11-5': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['111-11-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_87432']; candidate_pubchem_cids=[8091]; selected_pubchem_cids=[8091]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

19
# Step Field From To Why
10,445 bootstrap_labels prefLabel [{"@value":"methyl octanoate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo… Bootstrapped prefLabel from legacy name field
10,446 bootstrap_labels name methyl octanoate Purged legacy name field to enforce prefLabel usage
10,447 bootstrap_labels synonyms ["organic","methyloctanoate","ce-895"] [] Removed legacy synonyms field in favor of structured labels
172,962 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Non-agricultural"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
172,963 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-noag Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
216,806 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
223,538 normalize_name_case prefLabel [{"@value":"methyl octanoate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo… [{"@value":"Methyl Octanoate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
237,132 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H18O2"],… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
237,133 enrich_references skos_definition [{"@value":"A fatty acid methyl ester resulting from the formal condensation of the carboxy group of octanoic acid with… Merged ChEBI/PubChem definitions into skos:definition
237,134 enrich_references references [] [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J1.983F","provenance":{"prov:wasGeneratedBy":"enrich_reference… Added references with provenance; cas_numbers=['111-11-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_87432']; candidate_pubchem_cids=[8091]; selected_pubchem_cids=[8091]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
255,860 chebi_altlabels altLabel [] [{"@value":"caprylic acid methyl ester","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAtt… Added 3 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
268,899 consensus_match altLabel [{"@value":"caprylic acid methyl ester","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAtt… [{"@value":"caprylic acid methyl ester","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAtt… group_key=methyloctanoate||dimension=Environmental > media=Ground > geography=Unknown; cas=111-11-5; added Common Chemistry CAS names as altLabel: Agnique ME 890, Methyl <em>n</em>-octanoate, NSC 3710, Octanoic acid, methyl ester, Pastell M 08, Pastell M 8, Radia 7984, Uniphat A 20, Witconol 1095, Witconol 2309; object_uuid=fo-99cd8852b492dc96
268,900 consensus_match cas_match_labels {"111-11-5":"exactMatch"} group_key=methyloctanoate||dimension=Environmental > media=Ground > geography=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'111-11-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-99cd8852b492dc96: {'111-11-5': 'exactMatch'}
276,353 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H18O2"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H18O2"],… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Methyl Octanoate'
282,953 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H18O2"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H18O2"],… rdkit_post_consensus from 'CCCCCCCC(=O)OC'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
289,428 strip_catalogue_altlabels altLabel [{"@value":"caprylic acid methyl ester","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAtt… [{"@value":"caprylic acid methyl ester","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAtt… Removed 4 catalogue altLabel value(s): 'NSC 3710' (registry code), 'Radia 7984' (trade name), 'Witconol 1095' (trade name), 'Witconol 2309' (trade name)
367,505 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/cff898ad-10da-… associations resolved on the elementary layer
390,705 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H18O2"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H18O2"],… typed the way the ontology types it
398,448 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

19 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260822T0600486828500000/10445 prefLabel ef:agent/bootstrap_labels ef:flow/cff898ad-10da-42d3-bf46-1630030be57e/v0 ef:flow/cff898ad-10da-42d3-bf46-1630030be57e/v1
ef:activity/change/20260822T0600486828500000/10446 name ef:agent/bootstrap_labels ef:flow/cff898ad-10da-42d3-bf46-1630030be57e/v1 ef:flow/cff898ad-10da-42d3-bf46-1630030be57e/v2
ef:activity/change/20260822T0600486828500000/10447 synonyms ef:agent/bootstrap_labels ef:flow/cff898ad-10da-42d3-bf46-1630030be57e/v2 ef:flow/cff898ad-10da-42d3-bf46-1630030be57e/v3
ef:activity/change/20260822T0600486828500000/172962 context ef:agent/default_context_mapping ef:flow/cff898ad-10da-42d3-bf46-1630030be57e/v3 ef:flow/cff898ad-10da-42d3-bf46-1630030be57e/v4
ef:activity/change/20260822T0600486828500000/172963 context_iri ef:agent/default_context_mapping ef:flow/cff898ad-10da-42d3-bf46-1630030be57e/v4 ef:flow/cff898ad-10da-42d3-bf46-1630030be57e/v5
ef:activity/change/20260822T0600486828500000/216806 unit_iri ef:agent/unit_normalization ef:flow/cff898ad-10da-42d3-bf46-1630030be57e/v5 ef:flow/cff898ad-10da-42d3-bf46-1630030be57e/v6
ef:activity/change/20260822T0600486828500000/223538 prefLabel ef:agent/normalize_name_case ef:flow/cff898ad-10da-42d3-bf46-1630030be57e/v6 ef:flow/cff898ad-10da-42d3-bf46-1630030be57e/v7
ef:activity/change/20260822T0600486828500000/237132 properties ef:agent/enrich_references ef:flow/cff898ad-10da-42d3-bf46-1630030be57e/v7 ef:flow/cff898ad-10da-42d3-bf46-1630030be57e/v8
ef:activity/change/20260822T0600486828500000/237133 skos_definition ef:agent/enrich_references ef:flow/cff898ad-10da-42d3-bf46-1630030be57e/v8 ef:flow/cff898ad-10da-42d3-bf46-1630030be57e/v9
ef:activity/change/20260822T0600486828500000/237134 references ef:agent/enrich_references ef:flow/cff898ad-10da-42d3-bf46-1630030be57e/v9 ef:flow/cff898ad-10da-42d3-bf46-1630030be57e/v10
ef:activity/change/20260822T0600486828500000/255860 altLabel ef:agent/chebi_altlabels ef:flow/cff898ad-10da-42d3-bf46-1630030be57e/v10 ef:flow/cff898ad-10da-42d3-bf46-1630030be57e/v11
ef:activity/change/20260822T0600486828500000/268899 altLabel ef:agent/consensus_match ef:flow/cff898ad-10da-42d3-bf46-1630030be57e/v11 ef:flow/cff898ad-10da-42d3-bf46-1630030be57e/v12
ef:activity/change/20260822T0600486828500000/268900 cas_match_labels ef:agent/consensus_match ef:flow/cff898ad-10da-42d3-bf46-1630030be57e/v12 ef:flow/cff898ad-10da-42d3-bf46-1630030be57e/v13
ef:activity/change/20260822T0600486828500000/276353 properties ef:agent/opsin_iupac ef:flow/cff898ad-10da-42d3-bf46-1630030be57e/v13 ef:flow/cff898ad-10da-42d3-bf46-1630030be57e/v14
ef:activity/change/20260822T0600486828500000/282953 properties ef:agent/rdkit_post_consensus ef:flow/cff898ad-10da-42d3-bf46-1630030be57e/v14 ef:flow/cff898ad-10da-42d3-bf46-1630030be57e/v15
ef:activity/change/20260822T0600486828500000/289428 altLabel ef:agent/strip_catalogue_altlabels ef:flow/cff898ad-10da-42d3-bf46-1630030be57e/v15 ef:flow/cff898ad-10da-42d3-bf46-1630030be57e/v16
ef:activity/change/20260822T0600486828500000/367505 concept_associations ef:agent/carry_associations_onto_flows ef:flow/cff898ad-10da-42d3-bf46-1630030be57e/v16 ef:flow/cff898ad-10da-42d3-bf46-1630030be57e/v17
ef:activity/change/20260822T0600486828500000/390705 properties ef:agent/normalise_property_values ef:flow/cff898ad-10da-42d3-bf46-1630030be57e/v17 ef:flow/cff898ad-10da-42d3-bf46-1630030be57e/v18
ef:activity/change/20260822T0600486828500000/398448 types ef:agent/link_flows_to_their_substance ef:flow/cff898ad-10da-42d3-bf46-1630030be57e/v18 ef:flow/cff898ad-10da-42d3-bf46-1630030be57e/v19

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