Tridecan-1-ol
Everything that changed this flow. Back to the flow
d2d6e01c-77cf-4a9d-83fb-3081b4bdf262
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 3 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 1 catalogue altLabel value(s): 'NSC 5252' (registry code) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=tridecan-1-ol||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory']; cas_sources={'112-70-9': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-0a2cc5d7cbef52d0: {'112-70-9': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term) |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term) |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['112-70-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_34123']; candidate_pubchem_cids=[8207]; selected_pubchem_cids=[8207]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
20| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 22,280 | bootstrap_labels | prefLabel | — | [{"@value":"tridecan-1-ol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"… | Bootstrapped prefLabel from legacy name field |
| 22,281 | bootstrap_labels | name | tridecan-1-ol | — | Purged legacy name field to enforce prefLabel usage |
| 23,112 | bootstrap_labels | synonyms | ["1-TRIDECANOL","AC1L1QIA","Alcohols, C12-14","JFD04053","Maybridge1_004320","T0414","T0803","TRIDECYL ALCOHOL,MIX PRIM… | [] | Removed legacy synonyms field in favor of structured labels |
| 174,672 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Water","water_body":"Long-term"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term) |
| 174,673 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-wate-lote | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term) |
| 220,427 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 226,113 | normalize_name_case | prefLabel | [{"@value":"tridecan-1-ol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"… | [{"@value":"Tridecan-1-ol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 247,351 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H28O"],… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 247,352 | enrich_references | skos_definition | — | [{"@value":"A long-chain primary fatty alcohol that is tridecane substituted by a hydroxy group at position 1.","@langu… | Merged ChEBI/PubChem definitions into skos:definition |
| 247,353 | enrich_references | references | [] | [{"@id":"agr:IND606838273","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"… | Added references with provenance; cas_numbers=['112-70-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_34123']; candidate_pubchem_cids=[8207]; selected_pubchem_cids=[8207]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 254,137 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H28O"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H28O"],… | rdkit_pre_consensus from 'CCCCCCCCCCCCCO'; added: monoisotopic_mass |
| 257,180 | chebi_altlabels | altLabel | [] | [{"@value":"1-hydroxytridecane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedT… | Added 7 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 272,881 | consensus_match | altLabel | [{"@value":"1-hydroxytridecane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedT… | [{"@value":"1-hydroxytridecane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedT… | group_key=tridecan-1-ol||dimension=Environmental > media=Air > strata=Aircraft cruise height; cas=112-70-9; added Common Chemistry CAS names as altLabel: NSC 5252; object_uuid=fo-0a2cc5d7cbef52d0 |
| 272,882 | consensus_match | cas_match_labels | — | {"112-70-9":"exactMatch"} | group_key=tridecan-1-ol||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory']; cas_sources={'112-70-9': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-0a2cc5d7cbef52d0: {'112-70-9': 'exactMatch'} |
| 279,337 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H28O"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H28O"],… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Tridecan-1-ol' |
| 286,212 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H28O"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H28O"],… | rdkit_post_consensus from 'CCCCCCCCCCCCCO'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 291,581 | strip_catalogue_altlabels | altLabel | [{"@value":"1-hydroxytridecane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedT… | [{"@value":"1-hydroxytridecane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedT… | Removed 1 catalogue altLabel value(s): 'NSC 5252' (registry code) |
| 368,360 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/d2d6e01c-77cf-… | associations resolved on the elementary layer |
| 393,730 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H28O"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H28O"],… | typed the way the ontology types it |
| 402,884 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
PROV-O trail
20 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260821T1302361922970000/22280 | prefLabel | ef:agent/bootstrap_labels | ef:flow/d2d6e01c-77cf-4a9d-83fb-3081b4bdf262/v0 | ef:flow/d2d6e01c-77cf-4a9d-83fb-3081b4bdf262/v1 |
| ef:activity/change/20260821T1302361922970000/22281 | name | ef:agent/bootstrap_labels | ef:flow/d2d6e01c-77cf-4a9d-83fb-3081b4bdf262/v1 | ef:flow/d2d6e01c-77cf-4a9d-83fb-3081b4bdf262/v2 |
| ef:activity/change/20260821T1302361922970000/23112 | synonyms | ef:agent/bootstrap_labels | ef:flow/d2d6e01c-77cf-4a9d-83fb-3081b4bdf262/v2 | ef:flow/d2d6e01c-77cf-4a9d-83fb-3081b4bdf262/v3 |
| ef:activity/change/20260821T1302361922970000/174672 | context | ef:agent/default_context_mapping | ef:flow/d2d6e01c-77cf-4a9d-83fb-3081b4bdf262/v3 | ef:flow/d2d6e01c-77cf-4a9d-83fb-3081b4bdf262/v4 |
| ef:activity/change/20260821T1302361922970000/174673 | context_iri | ef:agent/default_context_mapping | ef:flow/d2d6e01c-77cf-4a9d-83fb-3081b4bdf262/v4 | ef:flow/d2d6e01c-77cf-4a9d-83fb-3081b4bdf262/v5 |
| ef:activity/change/20260821T1302361922970000/220427 | unit_iri | ef:agent/unit_normalization | ef:flow/d2d6e01c-77cf-4a9d-83fb-3081b4bdf262/v5 | ef:flow/d2d6e01c-77cf-4a9d-83fb-3081b4bdf262/v6 |
| ef:activity/change/20260821T1302361922970000/226113 | prefLabel | ef:agent/normalize_name_case | ef:flow/d2d6e01c-77cf-4a9d-83fb-3081b4bdf262/v6 | ef:flow/d2d6e01c-77cf-4a9d-83fb-3081b4bdf262/v7 |
| ef:activity/change/20260821T1302361922970000/247351 | properties | ef:agent/enrich_references | ef:flow/d2d6e01c-77cf-4a9d-83fb-3081b4bdf262/v7 | ef:flow/d2d6e01c-77cf-4a9d-83fb-3081b4bdf262/v8 |
| ef:activity/change/20260821T1302361922970000/247352 | skos_definition | ef:agent/enrich_references | ef:flow/d2d6e01c-77cf-4a9d-83fb-3081b4bdf262/v8 | ef:flow/d2d6e01c-77cf-4a9d-83fb-3081b4bdf262/v9 |
| ef:activity/change/20260821T1302361922970000/247353 | references | ef:agent/enrich_references | ef:flow/d2d6e01c-77cf-4a9d-83fb-3081b4bdf262/v9 | ef:flow/d2d6e01c-77cf-4a9d-83fb-3081b4bdf262/v10 |
| ef:activity/change/20260821T1302361922970000/254137 | properties | ef:agent/rdkit_pre_consensus | ef:flow/d2d6e01c-77cf-4a9d-83fb-3081b4bdf262/v10 | ef:flow/d2d6e01c-77cf-4a9d-83fb-3081b4bdf262/v11 |
| ef:activity/change/20260821T1302361922970000/257180 | altLabel | ef:agent/chebi_altlabels | ef:flow/d2d6e01c-77cf-4a9d-83fb-3081b4bdf262/v11 | ef:flow/d2d6e01c-77cf-4a9d-83fb-3081b4bdf262/v12 |
| ef:activity/change/20260821T1302361922970000/272881 | altLabel | ef:agent/consensus_match | ef:flow/d2d6e01c-77cf-4a9d-83fb-3081b4bdf262/v12 | ef:flow/d2d6e01c-77cf-4a9d-83fb-3081b4bdf262/v13 |
| ef:activity/change/20260821T1302361922970000/272882 | cas_match_labels | ef:agent/consensus_match | ef:flow/d2d6e01c-77cf-4a9d-83fb-3081b4bdf262/v13 | ef:flow/d2d6e01c-77cf-4a9d-83fb-3081b4bdf262/v14 |
| ef:activity/change/20260821T1302361922970000/279337 | properties | ef:agent/opsin_iupac | ef:flow/d2d6e01c-77cf-4a9d-83fb-3081b4bdf262/v14 | ef:flow/d2d6e01c-77cf-4a9d-83fb-3081b4bdf262/v15 |
| ef:activity/change/20260821T1302361922970000/286212 | properties | ef:agent/rdkit_post_consensus | ef:flow/d2d6e01c-77cf-4a9d-83fb-3081b4bdf262/v15 | ef:flow/d2d6e01c-77cf-4a9d-83fb-3081b4bdf262/v16 |
| ef:activity/change/20260821T1302361922970000/291581 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/d2d6e01c-77cf-4a9d-83fb-3081b4bdf262/v16 | ef:flow/d2d6e01c-77cf-4a9d-83fb-3081b4bdf262/v17 |
| ef:activity/change/20260821T1302361922970000/368360 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/d2d6e01c-77cf-4a9d-83fb-3081b4bdf262/v17 | ef:flow/d2d6e01c-77cf-4a9d-83fb-3081b4bdf262/v18 |
| ef:activity/change/20260821T1302361922970000/393730 | properties | ef:agent/normalise_property_values | ef:flow/d2d6e01c-77cf-4a9d-83fb-3081b4bdf262/v18 | ef:flow/d2d6e01c-77cf-4a9d-83fb-3081b4bdf262/v19 |
| ef:activity/change/20260821T1302361922970000/402884 | types | ef:agent/link_flows_to_their_substance | ef:flow/d2d6e01c-77cf-4a9d-83fb-3081b4bdf262/v19 | ef:flow/d2d6e01c-77cf-4a9d-83fb-3081b4bdf262/v20 |