3-Pyridinemethanol
Everything that changed this flow. Back to the flow
d2d98ffa-248c-4dea-846b-53ed01311cc8
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 4 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 2 catalogue altLabel value(s): 'NSC 526046' (registry code), 'Nu-2121' (grade code) |
| prefLabel | 2 | bootstrap_labels, consensus_match | cas=100-55-0; cc_chebi_agreed_name='3-Pyridinemethanol'; object_uuid=fo-fd170f6215546bba |
| cas_match_labels | 1 | consensus_match | group_key=3-pyridylmethanol||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'100-55-0': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-fd170f6215546bba: {'100-55-0': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['100-55-0']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_45213']; candidate_pubchem_cids=[7510, 14066, 82291, 287442]; selected_pubchem_cids=[7510]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
21| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 6,347 | bootstrap_labels | prefLabel | — | [{"@value":"3-pyridylmethanol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedT… | Bootstrapped prefLabel from legacy name field |
| 6,348 | bootstrap_labels | name | 3-pyridylmethanol | — | Purged legacy name field to enforce prefLabel usage |
| 13,591 | bootstrap_labels | synonyms | [".beta.-Picolyl alcohol",".beta.-Pyridinecarbinol",".beta.-Pyridylcarbinol","3-(Hydroxymethyl)pyridine","3-Hydroxymeth… | [] | Removed legacy synonyms field in favor of structured labels |
| 174,686 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Ground","geography":"Agricultural"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil |
| 174,687 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-grou-agri | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil |
| 215,460 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 233,281 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H7NO"],"… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 233,282 | enrich_references | skos_definition | — | [{"@value":"A member of the class of pyridines that is pyridine which is substituted by a hydroxymethyl group at positi… | Merged ChEBI/PubChem definitions into skos:definition |
| 233,283 | enrich_references | references | [] | [{"@id":"beilstein:107851","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"… | Added references with provenance; cas_numbers=['100-55-0']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_45213']; candidate_pubchem_cids=[7510, 14066, 82291, 287442]; selected_pubchem_cids=[7510]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 250,074 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H7NO"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H7NO"],"… | rdkit_pre_consensus from 'C1=CC(=CN=C1)CO'; added: monoisotopic_mass |
| 255,164 | chebi_altlabels | altLabel | [] | [{"@value":"3-(hydroxymethyl)pyridine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttr… | Added 15 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 262,207 | consensus_match | prefLabel | [{"@value":"3-pyridylmethanol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedT… | [{"@value":"3-Pyridinemethanol","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedT… | cas=100-55-0; cc_chebi_agreed_name='3-Pyridinemethanol'; object_uuid=fo-fd170f6215546bba |
| 262,208 | consensus_match | altLabel | [{"@value":"3-(hydroxymethyl)pyridine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttr… | [{"@value":"3-(hydroxymethyl)pyridine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttr… | cas=100-55-0; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-fd170f6215546bba |
| 262,209 | consensus_match | altLabel | [{"@value":"3-(hydroxymethyl)pyridine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttr… | [{"@value":"3-(hydroxymethyl)pyridine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttr… | group_key=3-pyridylmethanol||dimension=Environmental > media=Air > strata=Aircraft cruise height; cas=100-55-0; added Common Chemistry CAS names as altLabel: 3-Pyridyl carbinal, 5-(Hydroxymethyl)pyridine, NSC 526046, Nu-2121, RO-1-5155, Roniacol, β-Picolyl alcohol, β-Pyridinecarbinol, β-Pyridylcarbinol; object_uuid=fo-fd170f6215546bba |
| 262,210 | consensus_match | cas_match_labels | — | {"100-55-0":"exactMatch"} | group_key=3-pyridylmethanol||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'100-55-0': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-fd170f6215546bba: {'100-55-0': 'exactMatch'} |
| 275,211 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H7NO"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H7NO"],"… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '3-Pyridinemethanol' |
| 281,711 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H7NO"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H7NO"],"… | rdkit_post_consensus from 'OCc1cccnc1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 288,545 | strip_catalogue_altlabels | altLabel | [{"@value":"3-(hydroxymethyl)pyridine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttr… | [{"@value":"3-(hydroxymethyl)pyridine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttr… | Removed 2 catalogue altLabel value(s): 'NSC 526046' (registry code), 'Nu-2121' (grade code) |
| 368,365 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/d2d98ffa-248c-… | associations resolved on the elementary layer |
| 389,513 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H7NO"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H7NO"],"… | typed the way the ontology types it |
| 396,701 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
PROV-O trail
21 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260821T1122181958110000/6347 | prefLabel | ef:agent/bootstrap_labels | ef:flow/d2d98ffa-248c-4dea-846b-53ed01311cc8/v0 | ef:flow/d2d98ffa-248c-4dea-846b-53ed01311cc8/v1 |
| ef:activity/change/20260821T1122181958110000/6348 | name | ef:agent/bootstrap_labels | ef:flow/d2d98ffa-248c-4dea-846b-53ed01311cc8/v1 | ef:flow/d2d98ffa-248c-4dea-846b-53ed01311cc8/v2 |
| ef:activity/change/20260821T1122181958110000/13591 | synonyms | ef:agent/bootstrap_labels | ef:flow/d2d98ffa-248c-4dea-846b-53ed01311cc8/v2 | ef:flow/d2d98ffa-248c-4dea-846b-53ed01311cc8/v3 |
| ef:activity/change/20260821T1122181958110000/174686 | context | ef:agent/default_context_mapping | ef:flow/d2d98ffa-248c-4dea-846b-53ed01311cc8/v3 | ef:flow/d2d98ffa-248c-4dea-846b-53ed01311cc8/v4 |
| ef:activity/change/20260821T1122181958110000/174687 | context_iri | ef:agent/default_context_mapping | ef:flow/d2d98ffa-248c-4dea-846b-53ed01311cc8/v4 | ef:flow/d2d98ffa-248c-4dea-846b-53ed01311cc8/v5 |
| ef:activity/change/20260821T1122181958110000/215460 | unit_iri | ef:agent/unit_normalization | ef:flow/d2d98ffa-248c-4dea-846b-53ed01311cc8/v5 | ef:flow/d2d98ffa-248c-4dea-846b-53ed01311cc8/v6 |
| ef:activity/change/20260821T1122181958110000/233281 | properties | ef:agent/enrich_references | ef:flow/d2d98ffa-248c-4dea-846b-53ed01311cc8/v6 | ef:flow/d2d98ffa-248c-4dea-846b-53ed01311cc8/v7 |
| ef:activity/change/20260821T1122181958110000/233282 | skos_definition | ef:agent/enrich_references | ef:flow/d2d98ffa-248c-4dea-846b-53ed01311cc8/v7 | ef:flow/d2d98ffa-248c-4dea-846b-53ed01311cc8/v8 |
| ef:activity/change/20260821T1122181958110000/233283 | references | ef:agent/enrich_references | ef:flow/d2d98ffa-248c-4dea-846b-53ed01311cc8/v8 | ef:flow/d2d98ffa-248c-4dea-846b-53ed01311cc8/v9 |
| ef:activity/change/20260821T1122181958110000/250074 | properties | ef:agent/rdkit_pre_consensus | ef:flow/d2d98ffa-248c-4dea-846b-53ed01311cc8/v9 | ef:flow/d2d98ffa-248c-4dea-846b-53ed01311cc8/v10 |
| ef:activity/change/20260821T1122181958110000/255164 | altLabel | ef:agent/chebi_altlabels | ef:flow/d2d98ffa-248c-4dea-846b-53ed01311cc8/v10 | ef:flow/d2d98ffa-248c-4dea-846b-53ed01311cc8/v11 |
| ef:activity/change/20260821T1122181958110000/262207 | prefLabel | ef:agent/consensus_match | ef:flow/d2d98ffa-248c-4dea-846b-53ed01311cc8/v11 | ef:flow/d2d98ffa-248c-4dea-846b-53ed01311cc8/v12 |
| ef:activity/change/20260821T1122181958110000/262208 | altLabel | ef:agent/consensus_match | ef:flow/d2d98ffa-248c-4dea-846b-53ed01311cc8/v12 | ef:flow/d2d98ffa-248c-4dea-846b-53ed01311cc8/v13 |
| ef:activity/change/20260821T1122181958110000/262209 | altLabel | ef:agent/consensus_match | ef:flow/d2d98ffa-248c-4dea-846b-53ed01311cc8/v13 | ef:flow/d2d98ffa-248c-4dea-846b-53ed01311cc8/v14 |
| ef:activity/change/20260821T1122181958110000/262210 | cas_match_labels | ef:agent/consensus_match | ef:flow/d2d98ffa-248c-4dea-846b-53ed01311cc8/v14 | ef:flow/d2d98ffa-248c-4dea-846b-53ed01311cc8/v15 |
| ef:activity/change/20260821T1122181958110000/275211 | properties | ef:agent/opsin_iupac | ef:flow/d2d98ffa-248c-4dea-846b-53ed01311cc8/v15 | ef:flow/d2d98ffa-248c-4dea-846b-53ed01311cc8/v16 |
| ef:activity/change/20260821T1122181958110000/281711 | properties | ef:agent/rdkit_post_consensus | ef:flow/d2d98ffa-248c-4dea-846b-53ed01311cc8/v16 | ef:flow/d2d98ffa-248c-4dea-846b-53ed01311cc8/v17 |
| ef:activity/change/20260821T1122181958110000/288545 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/d2d98ffa-248c-4dea-846b-53ed01311cc8/v17 | ef:flow/d2d98ffa-248c-4dea-846b-53ed01311cc8/v18 |
| ef:activity/change/20260821T1122181958110000/368365 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/d2d98ffa-248c-4dea-846b-53ed01311cc8/v18 | ef:flow/d2d98ffa-248c-4dea-846b-53ed01311cc8/v19 |
| ef:activity/change/20260821T1122181958110000/389513 | properties | ef:agent/normalise_property_values | ef:flow/d2d98ffa-248c-4dea-846b-53ed01311cc8/v19 | ef:flow/d2d98ffa-248c-4dea-846b-53ed01311cc8/v20 |
| ef:activity/change/20260821T1122181958110000/396701 | types | ef:agent/link_flows_to_their_substance | ef:flow/d2d98ffa-248c-4dea-846b-53ed01311cc8/v20 | ef:flow/d2d98ffa-248c-4dea-846b-53ed01311cc8/v21 |