Nerolidol
Everything that changed this flow. Back to the flow
d7b56afb-bd32-40fa-8688-0a6a44b78136
By field
14 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 4 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 2 catalogue altLabel value(s): 'FCI 119b' (grade code), 'FEMA 2772' (grade code) |
| prefLabel | 3 | bootstrap_labels, consensus_match, normalize_name_case | cas=7212-44-4; cc_chebi_agreed_name='Nerolidol'; object_uuid=fo-284f0b08b518bca0 |
| cas_match_labels | 1 | consensus_match | group_key=3,7,11-trimethyldodeca-1,6,10-trien-3-ol,mixedisomers||dimension=Environmental > media=Water > water_body=Unknown; group_sources=['chebi', 'ec_inventory']; cas_sources={'7212-44-4': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-284f0b08b518bca0: {'7212-44-4': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['7212-44-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_7524']; candidate_pubchem_cids=[8888, 70702, 242527, 5281525, 5284507, 5320128, 11241545, 21339088]; selected_pubchem_cids=[]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| roles | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
23| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 13,333 | bootstrap_labels | prefLabel | — | [{"@value":"3,7,11-trimethyldodeca-1,6,10-trien-3-ol,mixed isomers","@language":"en","source":{"prov:wasGeneratedBy":"b… | Bootstrapped prefLabel from legacy name field |
| 13,334 | bootstrap_labels | name | 3,7,11-trimethyldodeca-1,6,10-trien-3-ol,mixed isomers | — | Purged legacy name field to enforce prefLabel usage |
| 13,335 | bootstrap_labels | synonyms | ["(6E)-3,7,11-trimethyldodeca-1,6,10-trien-3-ol","(6Z)-3,7,11-trimethyldodeca-1,6,10-trien-3-ol","(E)-3,7,11-Trimethyl-… | [] | Removed legacy synonyms field in favor of structured labels |
| 177,556 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Water","water_body":"Ocean"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water |
| 177,557 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-wate-ocea | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water |
| 217,751 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 224,191 | normalize_name_case | prefLabel | [{"@value":"3,7,11-trimethyldodeca-1,6,10-trien-3-ol,mixed isomers","@language":"en","source":{"prov:wasGeneratedBy":"b… | [{"@value":"3,7,11-trimethyldodeca-1,6,10-trien-3-ol,mixed Isomers","@language":"en","source":{"prov:wasGeneratedBy":"b… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 239,829 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H26O"],… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=0, commonchemistry_cas=['7212-44-4']) |
| 239,830 | enrich_references | skos_definition | — | [{"@value":"A farnesane sesquiterpenoid that is dodeca-1,6,10-triene which carries methyl groups at positions 3, 7 and… | Merged ChEBI/PubChem definitions into skos:definition |
| 239,831 | enrich_references | references | [] | [{"@id":"agr:IND607344987","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"… | Added references with provenance; cas_numbers=['7212-44-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_7524']; candidate_pubchem_cids=[8888, 70702, 242527, 5281525, 5284507, 5320128, 11241545, 21339088]; selected_pubchem_cids=[]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 251,961 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H26O"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H26O"],… | rdkit_pre_consensus from '[H]C(CCC(C)(O)C=C)=C(C)CCC=C(C)C'; added: monoisotopic_mass |
| 256,209 | chebi_altlabels | altLabel | [] | [{"@value":"3,7,11-trimethyl-1,6,10-dodecatrien-3-ol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels… | Added 6 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 261,674 | consensus_match | prefLabel | [{"@value":"3,7,11-trimethyldodeca-1,6,10-trien-3-ol,mixed Isomers","@language":"en","source":{"prov:wasGeneratedBy":"b… | [{"@value":"Nerolidol","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"conse… | cas=7212-44-4; cc_chebi_agreed_name='Nerolidol'; object_uuid=fo-284f0b08b518bca0 |
| 261,675 | consensus_match | altLabel | [{"@value":"3,7,11-trimethyl-1,6,10-dodecatrien-3-ol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels… | [{"@value":"3,7,11-trimethyl-1,6,10-dodecatrien-3-ol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels… | cas=7212-44-4; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-284f0b08b518bca0 |
| 261,676 | consensus_match | altLabel | [{"@value":"3,7,11-trimethyl-1,6,10-dodecatrien-3-ol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels… | [{"@value":"3,7,11-trimethyl-1,6,10-dodecatrien-3-ol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels… | group_key=3,7,11-trimethyldodeca-1,6,10-trien-3-ol,mixedisomers||dimension=Environmental > media=Water > water_body=Unknown; cas=7212-44-4; added Common Chemistry CAS names as altLabel: (±)-Nerolidol, 1,6,10-Dodecatrien-3-ol, 3,7,11-trimethyl-, FCI 119b, Nerodilol; object_uuid=fo-284f0b08b518bca0 |
| 261,677 | consensus_match | cas_match_labels | — | {"7212-44-4":"exactMatch"} | group_key=3,7,11-trimethyldodeca-1,6,10-trien-3-ol,mixedisomers||dimension=Environmental > media=Water > water_body=Unknown; group_sources=['chebi', 'ec_inventory']; cas_sources={'7212-44-4': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-284f0b08b518bca0: {'7212-44-4': 'exactMatch'} |
| 277,172 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H26O"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H26O"],… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Nerolidol' |
| 283,831 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H26O"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H26O"],… | rdkit_post_consensus from 'C=CC(C)(O)CCC=C(C)CCC=C(C)C'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 290,016 | strip_catalogue_altlabels | altLabel | [{"@value":"3,7,11-trimethyl-1,6,10-dodecatrien-3-ol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels… | [{"@value":"3,7,11-trimethyl-1,6,10-dodecatrien-3-ol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels… | Removed 2 catalogue altLabel value(s): 'FCI 119b' (grade code), 'FEMA 2772' (grade code) |
| 369,821 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/d7b56afb-bd32-… | associations resolved on the elementary layer |
| 391,522 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H26O"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H26O"],… | typed the way the ontology types it |
| 399,581 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
| 399,582 | link_flows_to_their_substance | roles | — | [{"@id":"http://purl.obolibrary.org/obo/CHEBI_24527","rdfs:label":"herbicide","http://www.w3.org/2004/02/skos/core#defi… | the substance's answer, copied onto its flow |
PROV-O trail
23 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260820T0738569779880000/13333 | prefLabel | ef:agent/bootstrap_labels | ef:flow/d7b56afb-bd32-40fa-8688-0a6a44b78136/v0 | ef:flow/d7b56afb-bd32-40fa-8688-0a6a44b78136/v1 |
| ef:activity/change/20260820T0738569779880000/13334 | name | ef:agent/bootstrap_labels | ef:flow/d7b56afb-bd32-40fa-8688-0a6a44b78136/v1 | ef:flow/d7b56afb-bd32-40fa-8688-0a6a44b78136/v2 |
| ef:activity/change/20260820T0738569779880000/13335 | synonyms | ef:agent/bootstrap_labels | ef:flow/d7b56afb-bd32-40fa-8688-0a6a44b78136/v2 | ef:flow/d7b56afb-bd32-40fa-8688-0a6a44b78136/v3 |
| ef:activity/change/20260820T0738569779880000/177556 | context | ef:agent/default_context_mapping | ef:flow/d7b56afb-bd32-40fa-8688-0a6a44b78136/v3 | ef:flow/d7b56afb-bd32-40fa-8688-0a6a44b78136/v4 |
| ef:activity/change/20260820T0738569779880000/177557 | context_iri | ef:agent/default_context_mapping | ef:flow/d7b56afb-bd32-40fa-8688-0a6a44b78136/v4 | ef:flow/d7b56afb-bd32-40fa-8688-0a6a44b78136/v5 |
| ef:activity/change/20260820T0738569779880000/217751 | unit_iri | ef:agent/unit_normalization | ef:flow/d7b56afb-bd32-40fa-8688-0a6a44b78136/v5 | ef:flow/d7b56afb-bd32-40fa-8688-0a6a44b78136/v6 |
| ef:activity/change/20260820T0738569779880000/224191 | prefLabel | ef:agent/normalize_name_case | ef:flow/d7b56afb-bd32-40fa-8688-0a6a44b78136/v6 | ef:flow/d7b56afb-bd32-40fa-8688-0a6a44b78136/v7 |
| ef:activity/change/20260820T0738569779880000/239829 | properties | ef:agent/enrich_references | ef:flow/d7b56afb-bd32-40fa-8688-0a6a44b78136/v7 | ef:flow/d7b56afb-bd32-40fa-8688-0a6a44b78136/v8 |
| ef:activity/change/20260820T0738569779880000/239830 | skos_definition | ef:agent/enrich_references | ef:flow/d7b56afb-bd32-40fa-8688-0a6a44b78136/v8 | ef:flow/d7b56afb-bd32-40fa-8688-0a6a44b78136/v9 |
| ef:activity/change/20260820T0738569779880000/239831 | references | ef:agent/enrich_references | ef:flow/d7b56afb-bd32-40fa-8688-0a6a44b78136/v9 | ef:flow/d7b56afb-bd32-40fa-8688-0a6a44b78136/v10 |
| ef:activity/change/20260820T0738569779880000/251961 | properties | ef:agent/rdkit_pre_consensus | ef:flow/d7b56afb-bd32-40fa-8688-0a6a44b78136/v10 | ef:flow/d7b56afb-bd32-40fa-8688-0a6a44b78136/v11 |
| ef:activity/change/20260820T0738569779880000/256209 | altLabel | ef:agent/chebi_altlabels | ef:flow/d7b56afb-bd32-40fa-8688-0a6a44b78136/v11 | ef:flow/d7b56afb-bd32-40fa-8688-0a6a44b78136/v12 |
| ef:activity/change/20260820T0738569779880000/261674 | prefLabel | ef:agent/consensus_match | ef:flow/d7b56afb-bd32-40fa-8688-0a6a44b78136/v12 | ef:flow/d7b56afb-bd32-40fa-8688-0a6a44b78136/v13 |
| ef:activity/change/20260820T0738569779880000/261675 | altLabel | ef:agent/consensus_match | ef:flow/d7b56afb-bd32-40fa-8688-0a6a44b78136/v13 | ef:flow/d7b56afb-bd32-40fa-8688-0a6a44b78136/v14 |
| ef:activity/change/20260820T0738569779880000/261676 | altLabel | ef:agent/consensus_match | ef:flow/d7b56afb-bd32-40fa-8688-0a6a44b78136/v14 | ef:flow/d7b56afb-bd32-40fa-8688-0a6a44b78136/v15 |
| ef:activity/change/20260820T0738569779880000/261677 | cas_match_labels | ef:agent/consensus_match | ef:flow/d7b56afb-bd32-40fa-8688-0a6a44b78136/v15 | ef:flow/d7b56afb-bd32-40fa-8688-0a6a44b78136/v16 |
| ef:activity/change/20260820T0738569779880000/277172 | properties | ef:agent/opsin_iupac | ef:flow/d7b56afb-bd32-40fa-8688-0a6a44b78136/v16 | ef:flow/d7b56afb-bd32-40fa-8688-0a6a44b78136/v17 |
| ef:activity/change/20260820T0738569779880000/283831 | properties | ef:agent/rdkit_post_consensus | ef:flow/d7b56afb-bd32-40fa-8688-0a6a44b78136/v17 | ef:flow/d7b56afb-bd32-40fa-8688-0a6a44b78136/v18 |
| ef:activity/change/20260820T0738569779880000/290016 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/d7b56afb-bd32-40fa-8688-0a6a44b78136/v18 | ef:flow/d7b56afb-bd32-40fa-8688-0a6a44b78136/v19 |
| ef:activity/change/20260820T0738569779880000/369821 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/d7b56afb-bd32-40fa-8688-0a6a44b78136/v19 | ef:flow/d7b56afb-bd32-40fa-8688-0a6a44b78136/v20 |
| ef:activity/change/20260820T0738569779880000/391522 | properties | ef:agent/normalise_property_values | ef:flow/d7b56afb-bd32-40fa-8688-0a6a44b78136/v20 | ef:flow/d7b56afb-bd32-40fa-8688-0a6a44b78136/v21 |
| ef:activity/change/20260820T0738569779880000/399581 | types | ef:agent/link_flows_to_their_substance | ef:flow/d7b56afb-bd32-40fa-8688-0a6a44b78136/v21 | ef:flow/d7b56afb-bd32-40fa-8688-0a6a44b78136/v22 |
| ef:activity/change/20260820T0738569779880000/399582 | roles | ef:agent/link_flows_to_their_substance | ef:flow/d7b56afb-bd32-40fa-8688-0a6a44b78136/v22 | ef:flow/d7b56afb-bd32-40fa-8688-0a6a44b78136/v23 |