Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 6 enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus the substance's answer, copied onto its flow
prefLabel 3 bootstrap_labels, flow_layers.pubchem_element_enrichment, normalize_name_case element name from the flow object: Lanthanum
altLabel 2 chebi_altlabels, consensus_match group_key=lanthanum||dimension=Environmental > media=Air > strata=Aircraft cruise height; cas=7439-91-0; added Common Chemistry CAS names as altLabel: MeSH ID: D007811; object_uuid=fo-d01f3205fb513fb9
cas_match_labels 1 consensus_match group_key=lanthanum||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'7439-91-0': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-d01f3205fb513fb9: {'7439-91-0': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['7439-91-0']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_33336']; candidate_pubchem_cids=[23926]; selected_pubchem_cids=[23926]; formula_similarity_expected=['La']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

21
# Step Field From To Why
5,253 bootstrap_labels prefLabel [{"@value":"lanthanum","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… Bootstrapped prefLabel from legacy name field
5,254 bootstrap_labels name lanthanum Purged legacy name field to enforce prefLabel usage
5,255 bootstrap_labels synonyms ["lanthanum"] [] Removed legacy synonyms field in favor of structured labels
177,690 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Agricultural"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
177,691 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-agri Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
215,015 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
222,312 normalize_name_case prefLabel [{"@value":"lanthanum","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… [{"@value":"Lanthanum","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
231,993 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["La"],"atte… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
231,994 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
231,995 enrich_references references [] [{"@id":"gmelin:16203","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"cons… Added references with provenance; cas_numbers=['7439-91-0']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_33336']; candidate_pubchem_cids=[23926]; selected_pubchem_cids=[23926]; formula_similarity_expected=['La']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
249,705 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["La"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["La"],"atte… rdkit_pre_consensus from '[La]'; added: monoisotopic_mass
255,023 chebi_altlabels altLabel [] [{"@value":"57La","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… Added 5 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
268,334 consensus_match altLabel [{"@value":"57La","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… [{"@value":"57La","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… group_key=lanthanum||dimension=Environmental > media=Air > strata=Aircraft cruise height; cas=7439-91-0; added Common Chemistry CAS names as altLabel: MeSH ID: D007811; object_uuid=fo-d01f3205fb513fb9
268,335 consensus_match cas_match_labels {"7439-91-0":"exactMatch"} group_key=lanthanum||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'7439-91-0': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-d01f3205fb513fb9: {'7439-91-0': 'exactMatch'}
274,856 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["La"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["La"],"atte… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Lanthanum'
281,323 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["La"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["La"],"atte… rdkit_post_consensus from '[La]'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
369,888 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/d7f23847-1a4e-… associations resolved on the elementary layer
389,160 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["La"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["La"],"atte… typed the way the ontology types it
396,191 link_flows_to_their_substance types ["https://w3id.org/chemrof/ChemicalElement"] the substance's answer, copied onto its flow
396,192 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["La"],"atte… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["La"],"atte… the substance's answer, copied onto its flow
403,785 flow_layers.pubchem_element_enrichment prefLabel [{"@value":"Lanthanum","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… [{"@value":"Lanthanum","@language":"en","@lang":"en","source":{"prov:wasGeneratedBy":"flow_layers.pubchem_element_enric… element name from the flow object: Lanthanum

PROV-O trail

21 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T1416470405690000/5253 prefLabel ef:agent/bootstrap_labels ef:flow/d7f23847-1a4e-456c-a1a1-60b9fa823fcc/v0 ef:flow/d7f23847-1a4e-456c-a1a1-60b9fa823fcc/v1
ef:activity/change/20260820T1416470405690000/5254 name ef:agent/bootstrap_labels ef:flow/d7f23847-1a4e-456c-a1a1-60b9fa823fcc/v1 ef:flow/d7f23847-1a4e-456c-a1a1-60b9fa823fcc/v2
ef:activity/change/20260820T1416470405690000/5255 synonyms ef:agent/bootstrap_labels ef:flow/d7f23847-1a4e-456c-a1a1-60b9fa823fcc/v2 ef:flow/d7f23847-1a4e-456c-a1a1-60b9fa823fcc/v3
ef:activity/change/20260820T1416470405690000/177690 context ef:agent/default_context_mapping ef:flow/d7f23847-1a4e-456c-a1a1-60b9fa823fcc/v3 ef:flow/d7f23847-1a4e-456c-a1a1-60b9fa823fcc/v4
ef:activity/change/20260820T1416470405690000/177691 context_iri ef:agent/default_context_mapping ef:flow/d7f23847-1a4e-456c-a1a1-60b9fa823fcc/v4 ef:flow/d7f23847-1a4e-456c-a1a1-60b9fa823fcc/v5
ef:activity/change/20260820T1416470405690000/215015 unit_iri ef:agent/unit_normalization ef:flow/d7f23847-1a4e-456c-a1a1-60b9fa823fcc/v5 ef:flow/d7f23847-1a4e-456c-a1a1-60b9fa823fcc/v6
ef:activity/change/20260820T1416470405690000/222312 prefLabel ef:agent/normalize_name_case ef:flow/d7f23847-1a4e-456c-a1a1-60b9fa823fcc/v6 ef:flow/d7f23847-1a4e-456c-a1a1-60b9fa823fcc/v7
ef:activity/change/20260820T1416470405690000/231993 properties ef:agent/enrich_references ef:flow/d7f23847-1a4e-456c-a1a1-60b9fa823fcc/v7 ef:flow/d7f23847-1a4e-456c-a1a1-60b9fa823fcc/v8
ef:activity/change/20260820T1416470405690000/231994 skos_definition ef:agent/enrich_references ef:flow/d7f23847-1a4e-456c-a1a1-60b9fa823fcc/v8 ef:flow/d7f23847-1a4e-456c-a1a1-60b9fa823fcc/v9
ef:activity/change/20260820T1416470405690000/231995 references ef:agent/enrich_references ef:flow/d7f23847-1a4e-456c-a1a1-60b9fa823fcc/v9 ef:flow/d7f23847-1a4e-456c-a1a1-60b9fa823fcc/v10
ef:activity/change/20260820T1416470405690000/249705 properties ef:agent/rdkit_pre_consensus ef:flow/d7f23847-1a4e-456c-a1a1-60b9fa823fcc/v10 ef:flow/d7f23847-1a4e-456c-a1a1-60b9fa823fcc/v11
ef:activity/change/20260820T1416470405690000/255023 altLabel ef:agent/chebi_altlabels ef:flow/d7f23847-1a4e-456c-a1a1-60b9fa823fcc/v11 ef:flow/d7f23847-1a4e-456c-a1a1-60b9fa823fcc/v12
ef:activity/change/20260820T1416470405690000/268334 altLabel ef:agent/consensus_match ef:flow/d7f23847-1a4e-456c-a1a1-60b9fa823fcc/v12 ef:flow/d7f23847-1a4e-456c-a1a1-60b9fa823fcc/v13
ef:activity/change/20260820T1416470405690000/268335 cas_match_labels ef:agent/consensus_match ef:flow/d7f23847-1a4e-456c-a1a1-60b9fa823fcc/v13 ef:flow/d7f23847-1a4e-456c-a1a1-60b9fa823fcc/v14
ef:activity/change/20260820T1416470405690000/274856 properties ef:agent/opsin_iupac ef:flow/d7f23847-1a4e-456c-a1a1-60b9fa823fcc/v14 ef:flow/d7f23847-1a4e-456c-a1a1-60b9fa823fcc/v15
ef:activity/change/20260820T1416470405690000/281323 properties ef:agent/rdkit_post_consensus ef:flow/d7f23847-1a4e-456c-a1a1-60b9fa823fcc/v15 ef:flow/d7f23847-1a4e-456c-a1a1-60b9fa823fcc/v16
ef:activity/change/20260820T1416470405690000/369888 concept_associations ef:agent/carry_associations_onto_flows ef:flow/d7f23847-1a4e-456c-a1a1-60b9fa823fcc/v16 ef:flow/d7f23847-1a4e-456c-a1a1-60b9fa823fcc/v17
ef:activity/change/20260820T1416470405690000/389160 properties ef:agent/normalise_property_values ef:flow/d7f23847-1a4e-456c-a1a1-60b9fa823fcc/v17 ef:flow/d7f23847-1a4e-456c-a1a1-60b9fa823fcc/v18
ef:activity/change/20260820T1416470405690000/396191 types ef:agent/link_flows_to_their_substance ef:flow/d7f23847-1a4e-456c-a1a1-60b9fa823fcc/v18 ef:flow/d7f23847-1a4e-456c-a1a1-60b9fa823fcc/v19
ef:activity/change/20260820T1416470405690000/396192 properties ef:agent/link_flows_to_their_substance ef:flow/d7f23847-1a4e-456c-a1a1-60b9fa823fcc/v19 ef:flow/d7f23847-1a4e-456c-a1a1-60b9fa823fcc/v20
ef:activity/change/20260820T1416470405690000/403785 prefLabel ef:agent/flow_layers.pubchem_element_enrichment ef:flow/d7f23847-1a4e-456c-a1a1-60b9fa823fcc/v20 ef:flow/d7f23847-1a4e-456c-a1a1-60b9fa823fcc/v21

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