Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 2 catalogue altLabel value(s): 'CCS 203' (grade code), 'NSC 62782' (registry code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=butanol||dimension=Environmental > media=Water > water_body=Surface water; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'71-36-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-f44408e65b7197cc: {'71-36-3': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['71-36-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_28885']; candidate_pubchem_cids=[263, 22057031]; selected_pubchem_cids=[263]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

20
# Step Field From To Why
6,864 bootstrap_labels prefLabel [{"@value":"butanol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consen… Bootstrapped prefLabel from legacy name field
6,865 bootstrap_labels name butanol Purged legacy name field to enforce prefLabel usage
6,866 bootstrap_labels synonyms ["1-Butanol","1-Butyl alcohol","Butyl alcohol","Butyric alcohol","Propyl carbinol","n-Butanol","n-Butyl alcohol"] [] Removed legacy synonyms field in favor of structured labels
178,008 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Agricultural"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
178,009 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-agri Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
215,636 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
222,676 normalize_name_case prefLabel [{"@value":"butanol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consen… [{"@value":"Butanol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consen… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
233,775 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H10O"],"… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
233,776 enrich_references skos_definition [{"@value":"A primary alcohol that is butane in which a hydrogen of one of the methyl groups is substituted by a hydrox… Merged ChEBI/PubChem definitions into skos:definition
233,777 enrich_references references [] [{"@id":"gmelin:25753","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"cons… Added references with provenance; cas_numbers=['71-36-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_28885']; candidate_pubchem_cids=[263, 22057031]; selected_pubchem_cids=[263]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
250,224 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H10O"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H10O"],"… rdkit_pre_consensus from 'CCCCO'; added: monoisotopic_mass
255,239 chebi_altlabels altLabel [] [{"@value":"1-BUTANOL","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"conse… Added 11 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
264,582 consensus_match altLabel [{"@value":"1-BUTANOL","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"conse… [{"@value":"1-BUTANOL","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"conse… group_key=butanol||dimension=Environmental > media=Water > water_body=Surface water; cas=71-36-3; added Common Chemistry CAS names as altLabel: Butyl alcohol, Butyl hydroxide, CCS 203, Hemostyp, MeSH ID: D020001, Methylolpropane, NSC 62782, Propylcarbinol; object_uuid=fo-f44408e65b7197cc
264,583 consensus_match cas_match_labels {"71-36-3":"exactMatch"} group_key=butanol||dimension=Environmental > media=Water > water_body=Surface water; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'71-36-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-f44408e65b7197cc: {'71-36-3': 'exactMatch'}
275,379 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H10O"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H10O"],"… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Butanol'
281,887 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H10O"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H10O"],"… rdkit_post_consensus from 'CCCCO'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
288,677 strip_catalogue_altlabels altLabel [{"@value":"1-BUTANOL","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"conse… [{"@value":"1-BUTANOL","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"conse… Removed 2 catalogue altLabel value(s): 'CCS 203' (grade code), 'NSC 62782' (registry code)
370,047 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/d86b9e6b-6555-… associations resolved on the elementary layer
389,683 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H10O"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H10O"],"… typed the way the ontology types it
396,928 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

20 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T0738569779880000/6864 prefLabel ef:agent/bootstrap_labels ef:flow/d86b9e6b-6555-11dd-ad8b-0800200c9a66/v0 ef:flow/d86b9e6b-6555-11dd-ad8b-0800200c9a66/v1
ef:activity/change/20260820T0738569779880000/6865 name ef:agent/bootstrap_labels ef:flow/d86b9e6b-6555-11dd-ad8b-0800200c9a66/v1 ef:flow/d86b9e6b-6555-11dd-ad8b-0800200c9a66/v2
ef:activity/change/20260820T0738569779880000/6866 synonyms ef:agent/bootstrap_labels ef:flow/d86b9e6b-6555-11dd-ad8b-0800200c9a66/v2 ef:flow/d86b9e6b-6555-11dd-ad8b-0800200c9a66/v3
ef:activity/change/20260820T0738569779880000/178008 context ef:agent/default_context_mapping ef:flow/d86b9e6b-6555-11dd-ad8b-0800200c9a66/v3 ef:flow/d86b9e6b-6555-11dd-ad8b-0800200c9a66/v4
ef:activity/change/20260820T0738569779880000/178009 context_iri ef:agent/default_context_mapping ef:flow/d86b9e6b-6555-11dd-ad8b-0800200c9a66/v4 ef:flow/d86b9e6b-6555-11dd-ad8b-0800200c9a66/v5
ef:activity/change/20260820T0738569779880000/215636 unit_iri ef:agent/unit_normalization ef:flow/d86b9e6b-6555-11dd-ad8b-0800200c9a66/v5 ef:flow/d86b9e6b-6555-11dd-ad8b-0800200c9a66/v6
ef:activity/change/20260820T0738569779880000/222676 prefLabel ef:agent/normalize_name_case ef:flow/d86b9e6b-6555-11dd-ad8b-0800200c9a66/v6 ef:flow/d86b9e6b-6555-11dd-ad8b-0800200c9a66/v7
ef:activity/change/20260820T0738569779880000/233775 properties ef:agent/enrich_references ef:flow/d86b9e6b-6555-11dd-ad8b-0800200c9a66/v7 ef:flow/d86b9e6b-6555-11dd-ad8b-0800200c9a66/v8
ef:activity/change/20260820T0738569779880000/233776 skos_definition ef:agent/enrich_references ef:flow/d86b9e6b-6555-11dd-ad8b-0800200c9a66/v8 ef:flow/d86b9e6b-6555-11dd-ad8b-0800200c9a66/v9
ef:activity/change/20260820T0738569779880000/233777 references ef:agent/enrich_references ef:flow/d86b9e6b-6555-11dd-ad8b-0800200c9a66/v9 ef:flow/d86b9e6b-6555-11dd-ad8b-0800200c9a66/v10
ef:activity/change/20260820T0738569779880000/250224 properties ef:agent/rdkit_pre_consensus ef:flow/d86b9e6b-6555-11dd-ad8b-0800200c9a66/v10 ef:flow/d86b9e6b-6555-11dd-ad8b-0800200c9a66/v11
ef:activity/change/20260820T0738569779880000/255239 altLabel ef:agent/chebi_altlabels ef:flow/d86b9e6b-6555-11dd-ad8b-0800200c9a66/v11 ef:flow/d86b9e6b-6555-11dd-ad8b-0800200c9a66/v12
ef:activity/change/20260820T0738569779880000/264582 altLabel ef:agent/consensus_match ef:flow/d86b9e6b-6555-11dd-ad8b-0800200c9a66/v12 ef:flow/d86b9e6b-6555-11dd-ad8b-0800200c9a66/v13
ef:activity/change/20260820T0738569779880000/264583 cas_match_labels ef:agent/consensus_match ef:flow/d86b9e6b-6555-11dd-ad8b-0800200c9a66/v13 ef:flow/d86b9e6b-6555-11dd-ad8b-0800200c9a66/v14
ef:activity/change/20260820T0738569779880000/275379 properties ef:agent/opsin_iupac ef:flow/d86b9e6b-6555-11dd-ad8b-0800200c9a66/v14 ef:flow/d86b9e6b-6555-11dd-ad8b-0800200c9a66/v15
ef:activity/change/20260820T0738569779880000/281887 properties ef:agent/rdkit_post_consensus ef:flow/d86b9e6b-6555-11dd-ad8b-0800200c9a66/v15 ef:flow/d86b9e6b-6555-11dd-ad8b-0800200c9a66/v16
ef:activity/change/20260820T0738569779880000/288677 altLabel ef:agent/strip_catalogue_altlabels ef:flow/d86b9e6b-6555-11dd-ad8b-0800200c9a66/v16 ef:flow/d86b9e6b-6555-11dd-ad8b-0800200c9a66/v17
ef:activity/change/20260820T0738569779880000/370047 concept_associations ef:agent/carry_associations_onto_flows ef:flow/d86b9e6b-6555-11dd-ad8b-0800200c9a66/v17 ef:flow/d86b9e6b-6555-11dd-ad8b-0800200c9a66/v18
ef:activity/change/20260820T0738569779880000/389683 properties ef:agent/normalise_property_values ef:flow/d86b9e6b-6555-11dd-ad8b-0800200c9a66/v18 ef:flow/d86b9e6b-6555-11dd-ad8b-0800200c9a66/v19
ef:activity/change/20260820T0738569779880000/396928 types ef:agent/link_flows_to_their_substance ef:flow/d86b9e6b-6555-11dd-ad8b-0800200c9a66/v19 ef:flow/d86b9e6b-6555-11dd-ad8b-0800200c9a66/v20

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