Methane
Everything that changed this flow. Back to the flow
d86caff4-6555-11dd-ad8b-0800200c9a66
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 4 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus | typed the way the ontology types it |
| altLabel | 3 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 2 catalogue altLabel value(s): 'R 50' (grade code), 'R 50 (refrigerant)' (grade code) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=methane||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'74-82-8': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-c0b0898c3b1f9e86: {'74-82-8': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['74-82-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_16183']; candidate_pubchem_cids=[297]; selected_pubchem_cids=[297]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
19| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 25,360 | bootstrap_labels | prefLabel | — | [{"@value":"methane","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consen… | Bootstrapped prefLabel from legacy name field |
| 25,361 | bootstrap_labels | name | methane | — | Purged legacy name field to enforce prefLabel usage |
| 25,362 | bootstrap_labels | synonyms | ["(11c)methane","(13c)methane","(2R,3R)-Butanediol bis(methanesulfonate)","(2R,3R)-Butanediol dimesylate","1,3-DICHLORO… | [] | Removed legacy synonyms field in favor of structured labels |
| 178,734 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Water","water_body":"Ocean"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water |
| 178,735 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-wate-ocea | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water |
| 220,991 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 226,588 | normalize_name_case | prefLabel | [{"@value":"methane","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consen… | [{"@value":"Methane","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consen… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 248,204 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["CH4"],"att… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 248,205 | enrich_references | skos_definition | — | [{"@value":"A one-carbon compound in which the carbon is attached by single bonds to four hydrogen atoms. It is a colou… | Merged ChEBI/PubChem definitions into skos:definition |
| 248,206 | enrich_references | references | [] | [{"@id":"gmelin:59","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"consens… | Added references with provenance; cas_numbers=['74-82-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_16183']; candidate_pubchem_cids=[297]; selected_pubchem_cids=[297]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 257,388 | chebi_altlabels | altLabel | [] | [{"@value":"CH4","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… | Added 6 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 268,657 | consensus_match | altLabel | [{"@value":"CH4","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… | [{"@value":"CH4","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… | group_key=methane||dimension=Environmental > media=Ground > geography=Agricultural; cas=74-82-8; added Common Chemistry CAS names as altLabel: MeSH ID: D008697, R 50, R 50 (refrigerant); object_uuid=fo-c0b0898c3b1f9e86 |
| 268,658 | consensus_match | cas_match_labels | — | {"74-82-8":"exactMatch"} | group_key=methane||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'74-82-8': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-c0b0898c3b1f9e86: {'74-82-8': 'exactMatch'} |
| 279,734 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["CH4"],"att… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["CH4"],"att… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Methane' |
| 286,630 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["CH4"],"att… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["CH4"],"att… | rdkit_post_consensus from 'C'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 291,856 | strip_catalogue_altlabels | altLabel | [{"@value":"CH4","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… | [{"@value":"CH4","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… | Removed 2 catalogue altLabel value(s): 'R 50' (grade code), 'R 50 (refrigerant)' (grade code) |
| 370,412 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/d86caff4-6555-… | associations resolved on the elementary layer |
| 394,145 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["CH4"],"att… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["CH4"],"att… | typed the way the ontology types it |
| 403,643 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
PROV-O trail
19 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260820T1416470405690000/25360 | prefLabel | ef:agent/bootstrap_labels | ef:flow/d86caff4-6555-11dd-ad8b-0800200c9a66/v0 | ef:flow/d86caff4-6555-11dd-ad8b-0800200c9a66/v1 |
| ef:activity/change/20260820T1416470405690000/25361 | name | ef:agent/bootstrap_labels | ef:flow/d86caff4-6555-11dd-ad8b-0800200c9a66/v1 | ef:flow/d86caff4-6555-11dd-ad8b-0800200c9a66/v2 |
| ef:activity/change/20260820T1416470405690000/25362 | synonyms | ef:agent/bootstrap_labels | ef:flow/d86caff4-6555-11dd-ad8b-0800200c9a66/v2 | ef:flow/d86caff4-6555-11dd-ad8b-0800200c9a66/v3 |
| ef:activity/change/20260820T1416470405690000/178734 | context | ef:agent/default_context_mapping | ef:flow/d86caff4-6555-11dd-ad8b-0800200c9a66/v3 | ef:flow/d86caff4-6555-11dd-ad8b-0800200c9a66/v4 |
| ef:activity/change/20260820T1416470405690000/178735 | context_iri | ef:agent/default_context_mapping | ef:flow/d86caff4-6555-11dd-ad8b-0800200c9a66/v4 | ef:flow/d86caff4-6555-11dd-ad8b-0800200c9a66/v5 |
| ef:activity/change/20260820T1416470405690000/220991 | unit_iri | ef:agent/unit_normalization | ef:flow/d86caff4-6555-11dd-ad8b-0800200c9a66/v5 | ef:flow/d86caff4-6555-11dd-ad8b-0800200c9a66/v6 |
| ef:activity/change/20260820T1416470405690000/226588 | prefLabel | ef:agent/normalize_name_case | ef:flow/d86caff4-6555-11dd-ad8b-0800200c9a66/v6 | ef:flow/d86caff4-6555-11dd-ad8b-0800200c9a66/v7 |
| ef:activity/change/20260820T1416470405690000/248204 | properties | ef:agent/enrich_references | ef:flow/d86caff4-6555-11dd-ad8b-0800200c9a66/v7 | ef:flow/d86caff4-6555-11dd-ad8b-0800200c9a66/v8 |
| ef:activity/change/20260820T1416470405690000/248205 | skos_definition | ef:agent/enrich_references | ef:flow/d86caff4-6555-11dd-ad8b-0800200c9a66/v8 | ef:flow/d86caff4-6555-11dd-ad8b-0800200c9a66/v9 |
| ef:activity/change/20260820T1416470405690000/248206 | references | ef:agent/enrich_references | ef:flow/d86caff4-6555-11dd-ad8b-0800200c9a66/v9 | ef:flow/d86caff4-6555-11dd-ad8b-0800200c9a66/v10 |
| ef:activity/change/20260820T1416470405690000/257388 | altLabel | ef:agent/chebi_altlabels | ef:flow/d86caff4-6555-11dd-ad8b-0800200c9a66/v10 | ef:flow/d86caff4-6555-11dd-ad8b-0800200c9a66/v11 |
| ef:activity/change/20260820T1416470405690000/268657 | altLabel | ef:agent/consensus_match | ef:flow/d86caff4-6555-11dd-ad8b-0800200c9a66/v11 | ef:flow/d86caff4-6555-11dd-ad8b-0800200c9a66/v12 |
| ef:activity/change/20260820T1416470405690000/268658 | cas_match_labels | ef:agent/consensus_match | ef:flow/d86caff4-6555-11dd-ad8b-0800200c9a66/v12 | ef:flow/d86caff4-6555-11dd-ad8b-0800200c9a66/v13 |
| ef:activity/change/20260820T1416470405690000/279734 | properties | ef:agent/opsin_iupac | ef:flow/d86caff4-6555-11dd-ad8b-0800200c9a66/v13 | ef:flow/d86caff4-6555-11dd-ad8b-0800200c9a66/v14 |
| ef:activity/change/20260820T1416470405690000/286630 | properties | ef:agent/rdkit_post_consensus | ef:flow/d86caff4-6555-11dd-ad8b-0800200c9a66/v14 | ef:flow/d86caff4-6555-11dd-ad8b-0800200c9a66/v15 |
| ef:activity/change/20260820T1416470405690000/291856 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/d86caff4-6555-11dd-ad8b-0800200c9a66/v15 | ef:flow/d86caff4-6555-11dd-ad8b-0800200c9a66/v16 |
| ef:activity/change/20260820T1416470405690000/370412 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/d86caff4-6555-11dd-ad8b-0800200c9a66/v16 | ef:flow/d86caff4-6555-11dd-ad8b-0800200c9a66/v17 |
| ef:activity/change/20260820T1416470405690000/394145 | properties | ef:agent/normalise_property_values | ef:flow/d86caff4-6555-11dd-ad8b-0800200c9a66/v17 | ef:flow/d86caff4-6555-11dd-ad8b-0800200c9a66/v18 |
| ef:activity/change/20260820T1416470405690000/403643 | types | ef:agent/link_flows_to_their_substance | ef:flow/d86caff4-6555-11dd-ad8b-0800200c9a66/v18 | ef:flow/d86caff4-6555-11dd-ad8b-0800200c9a66/v19 |