Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 6 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus, withhold_ambiguous_mass typed the way the ontology types it
altLabel 2 consensus_match, strip_catalogue_altlabels Removed 3 catalogue altLabel value(s): 'NSC 14433' (registry code), 'NSC 4774' (registry code), 'RKZ 3008' (grade code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=dioximep-benzoquinone||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'105-11-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-22e2f5ff5eeaec06: {'105-11-3': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['105-11-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_82404']; candidate_pubchem_cids=[7737, 62485]; selected_pubchem_cids=[7737]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

20
# Step Field From To Why
7,259 bootstrap_labels prefLabel [{"@value":"dioxime p-benzoquinone","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttrib… Bootstrapped prefLabel from legacy name field
7,260 bootstrap_labels name dioxime p-benzoquinone Purged legacy name field to enforce prefLabel usage
25,374 bootstrap_labels synonyms ["p-benzoquinonedioxime","1,4-benzoquinonedioxime","benzoquinonedioxime","n-[4-(hydroxyimino)cyclohexa-2,5-dien-1-ylide… [] Removed legacy synonyms field in favor of structured labels
179,370 default_context_mapping context {"dimension":"Environmental","media":"Air","indoor":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
179,371 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-indr-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
215,762 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
222,766 normalize_name_case prefLabel [{"@value":"dioxime p-benzoquinone","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttrib… [{"@value":"Dioxime P-benzoquinone","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttrib… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
234,141 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H6N2O2"]… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
234,142 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
234,143 enrich_references references [] [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J5.040G","provenance":{"prov:wasGeneratedBy":"enrich_reference… Added references with provenance; cas_numbers=['105-11-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_82404']; candidate_pubchem_cids=[7737, 62485]; selected_pubchem_cids=[7737]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
250,324 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H6N2O2"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H6N2O2"]… rdkit_pre_consensus from 'C1=CC(=CC=C1NO)N=O'; added: monoisotopic_mass
266,212 consensus_match altLabel [] [{"@value":"1,4-Benzoquinone dioxime","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttri… group_key=dioximep-benzoquinone||dimension=Environmental > media=Ground > geography=Agricultural; cas=105-11-3; added Common Chemistry CAS names as altLabel: 1,4-Benzoquinone dioxime, 2,5-Cyclohexadiene-1,4-dione, 1,4-dioxime, 2,5-Cyclohexadiene-1,4-dione, dioxime, <em>p</em>-Benzoquinone, dioxime, <em>p</em>-Quinone dioxime, <em>p</em>-Quinone oxime, Actor Q, Benzoquinone dioxime, GDO 65MK, GM-P, Luvomaxx K-CDO 65W, Luxomaxx K-CDO, NSC 14433, NSC 4774, Quinone dioxime, RKZ 3008, Vulnoc DM, Vulnoc GM, Vulnoc GM-P; object_uuid=fo-22e2f5ff5eeaec06
266,213 consensus_match cas_match_labels {"105-11-3":"exactMatch"} group_key=dioximep-benzoquinone||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'105-11-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-22e2f5ff5eeaec06: {'105-11-3': 'exactMatch'}
275,472 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H6N2O2"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H6N2O2"]… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '1,4-Benzoquinone dioxime'
281,992 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H6N2O2"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H6N2O2"]… rdkit_post_consensus from 'ON=C1C=CC(=NO)C=C1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
286,871 withhold_ambiguous_mass properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H6N2O2"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H6N2O2"]… withhold_ambiguous_mass: removed molecular_mass, monoisotopic_mass; the flow carries 2 candidate structures, so no one mass describes it
288,747 strip_catalogue_altlabels altLabel [{"@value":"1,4-Benzoquinone dioxime","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttri… [{"@value":"1,4-Benzoquinone dioxime","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttri… Removed 3 catalogue altLabel value(s): 'NSC 14433' (registry code), 'NSC 4774' (registry code), 'RKZ 3008' (grade code)
370,711 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/d95913c3-0672-… associations resolved on the elementary layer
389,785 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H6N2O2"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H6N2O2"]… typed the way the ontology types it
397,094 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

20 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260822T0600486828500000/7259 prefLabel ef:agent/bootstrap_labels ef:flow/d95913c3-0672-42f9-826d-42661d4c298a/v0 ef:flow/d95913c3-0672-42f9-826d-42661d4c298a/v1
ef:activity/change/20260822T0600486828500000/7260 name ef:agent/bootstrap_labels ef:flow/d95913c3-0672-42f9-826d-42661d4c298a/v1 ef:flow/d95913c3-0672-42f9-826d-42661d4c298a/v2
ef:activity/change/20260822T0600486828500000/25374 synonyms ef:agent/bootstrap_labels ef:flow/d95913c3-0672-42f9-826d-42661d4c298a/v2 ef:flow/d95913c3-0672-42f9-826d-42661d4c298a/v3
ef:activity/change/20260822T0600486828500000/179370 context ef:agent/default_context_mapping ef:flow/d95913c3-0672-42f9-826d-42661d4c298a/v3 ef:flow/d95913c3-0672-42f9-826d-42661d4c298a/v4
ef:activity/change/20260822T0600486828500000/179371 context_iri ef:agent/default_context_mapping ef:flow/d95913c3-0672-42f9-826d-42661d4c298a/v4 ef:flow/d95913c3-0672-42f9-826d-42661d4c298a/v5
ef:activity/change/20260822T0600486828500000/215762 unit_iri ef:agent/unit_normalization ef:flow/d95913c3-0672-42f9-826d-42661d4c298a/v5 ef:flow/d95913c3-0672-42f9-826d-42661d4c298a/v6
ef:activity/change/20260822T0600486828500000/222766 prefLabel ef:agent/normalize_name_case ef:flow/d95913c3-0672-42f9-826d-42661d4c298a/v6 ef:flow/d95913c3-0672-42f9-826d-42661d4c298a/v7
ef:activity/change/20260822T0600486828500000/234141 properties ef:agent/enrich_references ef:flow/d95913c3-0672-42f9-826d-42661d4c298a/v7 ef:flow/d95913c3-0672-42f9-826d-42661d4c298a/v8
ef:activity/change/20260822T0600486828500000/234142 skos_definition ef:agent/enrich_references ef:flow/d95913c3-0672-42f9-826d-42661d4c298a/v8 ef:flow/d95913c3-0672-42f9-826d-42661d4c298a/v9
ef:activity/change/20260822T0600486828500000/234143 references ef:agent/enrich_references ef:flow/d95913c3-0672-42f9-826d-42661d4c298a/v9 ef:flow/d95913c3-0672-42f9-826d-42661d4c298a/v10
ef:activity/change/20260822T0600486828500000/250324 properties ef:agent/rdkit_pre_consensus ef:flow/d95913c3-0672-42f9-826d-42661d4c298a/v10 ef:flow/d95913c3-0672-42f9-826d-42661d4c298a/v11
ef:activity/change/20260822T0600486828500000/266212 altLabel ef:agent/consensus_match ef:flow/d95913c3-0672-42f9-826d-42661d4c298a/v11 ef:flow/d95913c3-0672-42f9-826d-42661d4c298a/v12
ef:activity/change/20260822T0600486828500000/266213 cas_match_labels ef:agent/consensus_match ef:flow/d95913c3-0672-42f9-826d-42661d4c298a/v12 ef:flow/d95913c3-0672-42f9-826d-42661d4c298a/v13
ef:activity/change/20260822T0600486828500000/275472 properties ef:agent/opsin_iupac ef:flow/d95913c3-0672-42f9-826d-42661d4c298a/v13 ef:flow/d95913c3-0672-42f9-826d-42661d4c298a/v14
ef:activity/change/20260822T0600486828500000/281992 properties ef:agent/rdkit_post_consensus ef:flow/d95913c3-0672-42f9-826d-42661d4c298a/v14 ef:flow/d95913c3-0672-42f9-826d-42661d4c298a/v15
ef:activity/change/20260822T0600486828500000/286871 properties ef:agent/withhold_ambiguous_mass ef:flow/d95913c3-0672-42f9-826d-42661d4c298a/v15 ef:flow/d95913c3-0672-42f9-826d-42661d4c298a/v16
ef:activity/change/20260822T0600486828500000/288747 altLabel ef:agent/strip_catalogue_altlabels ef:flow/d95913c3-0672-42f9-826d-42661d4c298a/v16 ef:flow/d95913c3-0672-42f9-826d-42661d4c298a/v17
ef:activity/change/20260822T0600486828500000/370711 concept_associations ef:agent/carry_associations_onto_flows ef:flow/d95913c3-0672-42f9-826d-42661d4c298a/v17 ef:flow/d95913c3-0672-42f9-826d-42661d4c298a/v18
ef:activity/change/20260822T0600486828500000/389785 properties ef:agent/normalise_property_values ef:flow/d95913c3-0672-42f9-826d-42661d4c298a/v18 ef:flow/d95913c3-0672-42f9-826d-42661d4c298a/v19
ef:activity/change/20260822T0600486828500000/397094 types ef:agent/link_flows_to_their_substance ef:flow/d95913c3-0672-42f9-826d-42661d4c298a/v19 ef:flow/d95913c3-0672-42f9-826d-42661d4c298a/v20

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