Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 4 chebi_altlabels, consensus_match, dedupe_altlabels Deduplicated altLabel values and removed entries matching prefLabel
prefLabel 2 bootstrap_labels, consensus_match cas=18854-01-8; cc_chebi_agreed_name='Isoxathion'; object_uuid=fo-3d7967c7df233ed1
cas_match_labels 1 consensus_match group_key=o,o-diethylo-5-phenylisoxazol-3-ylphosphorothioate||dimension=Environmental > media=Water > water_body=Surface water; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'18854-01-8': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-3d7967c7df233ed1: {'18854-01-8': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['18854-01-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_34801']; candidate_pubchem_cids=[29307]; selected_pubchem_cids=[29307]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
roles 1 link_flows_to_their_substance the substance's answer, copied onto its flow
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

22
# Step Field From To Why
5,399 bootstrap_labels prefLabel [{"@value":"O,O-diethyl O-5-phenylisoxazol-3-ylphosphorothioate","@language":"en","source":{"prov:wasGeneratedBy":"boot… Bootstrapped prefLabel from legacy name field
5,400 bootstrap_labels name O,O-diethyl O-5-phenylisoxazol-3-ylphosphorothioate Purged legacy name field to enforce prefLabel usage
5,401 bootstrap_labels synonyms ["AC1L1H6D","AC1Q7FNC","AKOS005167093","E-48","ISOXATHION","Isoxathion [BSI:JMAF:ISO]","Isoxathion [ISO:BSI]","Karphos"… [] Removed legacy synonyms field in favor of structured labels
179,800 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Ground level","population_density":"Urban (>1000 people/square mil… Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground
179,801 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-grle-ur10pesq Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground
215,147 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
232,375 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H16NO4P… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
232,376 enrich_references skos_definition [{"@value":"An organic thiophosphate that is O,O-diethyl hydrogen phosphorothioate in which the hydrogen of the hydroxy… Merged ChEBI/PubChem definitions into skos:definition
232,377 enrich_references references [] [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J3.456H","provenance":{"prov:wasGeneratedBy":"enrich_reference… Added references with provenance; cas_numbers=['18854-01-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_34801']; candidate_pubchem_cids=[29307]; selected_pubchem_cids=[29307]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
249,813 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H16NO4P… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H16NO4P… rdkit_pre_consensus from 'CCOP(=S)(OCC)OC1=NOC(=C1)C2=CC=CC=C2'; added: monoisotopic_mass
255,069 chebi_altlabels altLabel [] [{"@value":"Isoxathion","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"cons… Added 6 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
270,017 consensus_match prefLabel [{"@value":"O,O-diethyl O-5-phenylisoxazol-3-ylphosphorothioate","@language":"en","source":{"prov:wasGeneratedBy":"boot… [{"@value":"Isoxathion","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"cons… cas=18854-01-8; cc_chebi_agreed_name='Isoxathion'; object_uuid=fo-3d7967c7df233ed1
270,018 consensus_match altLabel [{"@value":"Isoxathion","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"cons… [{"@value":"Karphos","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… cas=18854-01-8; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-3d7967c7df233ed1
270,021 consensus_match altLabel [{"@value":"Karphos","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… [{"@value":"Karphos","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… group_key=o,o-diethylo-5-phenylisoxazol-3-ylphosphorothioate||dimension=Environmental > media=Water > water_body=Surface water; cas=18854-01-8; added Common Chemistry CAS names as altLabel: 3-Isoxazolol, 5-phenyl-, <em>O</em>-ester with <em>O</em>,<em>O</em>-diethyl phosphorothioate, Phosphorothioic acid, <em>O</em>,<em>O</em>-diethyl <em>O</em>-(5-phenyl-3-isoxazolyl) ester; object_uuid=fo-3d7967c7df233ed1
270,023 consensus_match cas_match_labels {"18854-01-8":"exactMatch"} group_key=o,o-diethylo-5-phenylisoxazol-3-ylphosphorothioate||dimension=Environmental > media=Water > water_body=Surface water; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'18854-01-8': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-3d7967c7df233ed1: {'18854-01-8': 'exactMatch'}
274,969 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H16NO4P… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H16NO4P… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'O,O-Diethyl O-(5-phenyl-3-isoxazolyl) phosphorothioate'
281,444 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H16NO4P… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H16NO4P… rdkit_post_consensus from 'CCOP(=S)(OCC)Oc1cc(-c2ccccc2)on1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
292,282 dedupe_altlabels altLabel [{"@value":"Karphos","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… [{"@value":"Karphos","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… Deduplicated altLabel values and removed entries matching prefLabel
370,946 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/da169d7f-8968-… associations resolved on the elementary layer
389,274 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H16NO4P… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H16NO4P… typed the way the ontology types it
396,341 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
396,342 link_flows_to_their_substance roles [{"@id":"http://purl.obolibrary.org/obo/CHEBI_33286","rdfs:label":"agrochemical","http://www.w3.org/2004/02/skos/core#d… the substance's answer, copied onto its flow

PROV-O trail

22 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T1416470405690000/5399 prefLabel ef:agent/bootstrap_labels ef:flow/da169d7f-8968-4440-85c6-310594278487/v0 ef:flow/da169d7f-8968-4440-85c6-310594278487/v1
ef:activity/change/20260820T1416470405690000/5400 name ef:agent/bootstrap_labels ef:flow/da169d7f-8968-4440-85c6-310594278487/v1 ef:flow/da169d7f-8968-4440-85c6-310594278487/v2
ef:activity/change/20260820T1416470405690000/5401 synonyms ef:agent/bootstrap_labels ef:flow/da169d7f-8968-4440-85c6-310594278487/v2 ef:flow/da169d7f-8968-4440-85c6-310594278487/v3
ef:activity/change/20260820T1416470405690000/179800 context ef:agent/default_context_mapping ef:flow/da169d7f-8968-4440-85c6-310594278487/v3 ef:flow/da169d7f-8968-4440-85c6-310594278487/v4
ef:activity/change/20260820T1416470405690000/179801 context_iri ef:agent/default_context_mapping ef:flow/da169d7f-8968-4440-85c6-310594278487/v4 ef:flow/da169d7f-8968-4440-85c6-310594278487/v5
ef:activity/change/20260820T1416470405690000/215147 unit_iri ef:agent/unit_normalization ef:flow/da169d7f-8968-4440-85c6-310594278487/v5 ef:flow/da169d7f-8968-4440-85c6-310594278487/v6
ef:activity/change/20260820T1416470405690000/232375 properties ef:agent/enrich_references ef:flow/da169d7f-8968-4440-85c6-310594278487/v6 ef:flow/da169d7f-8968-4440-85c6-310594278487/v7
ef:activity/change/20260820T1416470405690000/232376 skos_definition ef:agent/enrich_references ef:flow/da169d7f-8968-4440-85c6-310594278487/v7 ef:flow/da169d7f-8968-4440-85c6-310594278487/v8
ef:activity/change/20260820T1416470405690000/232377 references ef:agent/enrich_references ef:flow/da169d7f-8968-4440-85c6-310594278487/v8 ef:flow/da169d7f-8968-4440-85c6-310594278487/v9
ef:activity/change/20260820T1416470405690000/249813 properties ef:agent/rdkit_pre_consensus ef:flow/da169d7f-8968-4440-85c6-310594278487/v9 ef:flow/da169d7f-8968-4440-85c6-310594278487/v10
ef:activity/change/20260820T1416470405690000/255069 altLabel ef:agent/chebi_altlabels ef:flow/da169d7f-8968-4440-85c6-310594278487/v10 ef:flow/da169d7f-8968-4440-85c6-310594278487/v11
ef:activity/change/20260820T1416470405690000/270017 prefLabel ef:agent/consensus_match ef:flow/da169d7f-8968-4440-85c6-310594278487/v11 ef:flow/da169d7f-8968-4440-85c6-310594278487/v12
ef:activity/change/20260820T1416470405690000/270018 altLabel ef:agent/consensus_match ef:flow/da169d7f-8968-4440-85c6-310594278487/v12 ef:flow/da169d7f-8968-4440-85c6-310594278487/v13
ef:activity/change/20260820T1416470405690000/270021 altLabel ef:agent/consensus_match ef:flow/da169d7f-8968-4440-85c6-310594278487/v13 ef:flow/da169d7f-8968-4440-85c6-310594278487/v14
ef:activity/change/20260820T1416470405690000/270023 cas_match_labels ef:agent/consensus_match ef:flow/da169d7f-8968-4440-85c6-310594278487/v14 ef:flow/da169d7f-8968-4440-85c6-310594278487/v15
ef:activity/change/20260820T1416470405690000/274969 properties ef:agent/opsin_iupac ef:flow/da169d7f-8968-4440-85c6-310594278487/v15 ef:flow/da169d7f-8968-4440-85c6-310594278487/v16
ef:activity/change/20260820T1416470405690000/281444 properties ef:agent/rdkit_post_consensus ef:flow/da169d7f-8968-4440-85c6-310594278487/v16 ef:flow/da169d7f-8968-4440-85c6-310594278487/v17
ef:activity/change/20260820T1416470405690000/292282 altLabel ef:agent/dedupe_altlabels ef:flow/da169d7f-8968-4440-85c6-310594278487/v17 ef:flow/da169d7f-8968-4440-85c6-310594278487/v18
ef:activity/change/20260820T1416470405690000/370946 concept_associations ef:agent/carry_associations_onto_flows ef:flow/da169d7f-8968-4440-85c6-310594278487/v18 ef:flow/da169d7f-8968-4440-85c6-310594278487/v19
ef:activity/change/20260820T1416470405690000/389274 properties ef:agent/normalise_property_values ef:flow/da169d7f-8968-4440-85c6-310594278487/v19 ef:flow/da169d7f-8968-4440-85c6-310594278487/v20
ef:activity/change/20260820T1416470405690000/396341 types ef:agent/link_flows_to_their_substance ef:flow/da169d7f-8968-4440-85c6-310594278487/v20 ef:flow/da169d7f-8968-4440-85c6-310594278487/v21
ef:activity/change/20260820T1416470405690000/396342 roles ef:agent/link_flows_to_their_substance ef:flow/da169d7f-8968-4440-85c6-310594278487/v21 ef:flow/da169d7f-8968-4440-85c6-310594278487/v22

Keyboard

?
Show or hide this map
Esc
Close

More as the sections are built.