Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 6 enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus the substance's answer, copied onto its flow
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 3 catalogue altLabel value(s): 'CL 12625' (grade code), 'E 235' (grade code), 'E-235' (grade code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=natamycin||dimension=Environmental > media=Air > strata=Long-term; group_sources=['chebi', 'ec_inventory']; cas_sources={'7681-93-8': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-60d244efb5a7854e: {'7681-93-8': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['7681-93-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_7488']; candidate_pubchem_cids=[441382, 456862, 2723719, 4283516, 5281099, 5284447, 6057875, 6473973, 9939594, 16102132, 21584622, 23305305, 24893610, 49867925, 53384934, 57345768, 57417192, 57501504, 66509030, 71306823, 71308755, 71750954, 72734318, 75534860, 90489753, 102503760, 118988145, 122130338, 135889896, 135921797, 137705128, 138106991, 138393806, 146159711, 170922376]; selected_pubchem_cids=[5281099]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
roles 1 link_flows_to_their_substance the substance's answer, copied onto its flow
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

22
# Step Field From To Why
3,086 bootstrap_labels prefLabel [{"@value":"natamycin","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… Bootstrapped prefLabel from legacy name field
3,087 bootstrap_labels name natamycin Purged legacy name field to enforce prefLabel usage
3,088 bootstrap_labels synonyms ["organic","natamycin"] [] Removed legacy synonyms field in favor of structured labels
181,412 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
181,413 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
214,375 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
221,803 normalize_name_case prefLabel [{"@value":"natamycin","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… [{"@value":"Natamycin","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
230,152 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C33H47NO13… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
230,153 enrich_references skos_definition [{"@value":"A macrolide antibiotic that has formula C33H47NO13, produced by several Streptomyces species including Stre… Merged ChEBI/PubChem definitions into skos:definition
230,154 enrich_references references [] [{"@id":"agr:IND607246306","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"… Added references with provenance; cas_numbers=['7681-93-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_7488']; candidate_pubchem_cids=[441382, 456862, 2723719, 4283516, 5281099, 5284447, 6057875, 6473973, 9939594, 16102132, 21584622, 23305305, 24893610, 49867925, 53384934, 57345768, 57417192, 57501504, 66509030, 71306823, 71308755, 71750954, 72734318, 75534860, 90489753, 102503760, 118988145, 122130338, 135889896, 135921797, 137705128, 138106991, 138393806, 146159711, 170922376]; selected_pubchem_cids=[5281099]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
249,182 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C33H47NO13… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C33H47NO13… rdkit_pre_consensus from 'CC1CC=CC=CC=CC=CC(CC2C(C(CC(O2)(CC(CC3C(O3)C=CC(=O)O1)O)O)O)C(=O)O)OC4C(C(C(C(O4)C)O)N)O'; added: inchi2d_string, monoisotopic_mass
254,739 chebi_altlabels altLabel [] [{"@value":"(1R,3S,5R,7R,8E,12R,14E,16E,18E,20E,22R,24S,25R,26S)-22-[(3-amino-3,6-dideoxy-beta-D-mannopyranosyl)oxy]-1,… Added 25 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
269,805 consensus_match altLabel [{"@value":"(1R,3S,5R,7R,8E,12R,14E,16E,18E,20E,22R,24S,25R,26S)-22-[(3-amino-3,6-dideoxy-beta-D-mannopyranosyl)oxy]-1,… [{"@value":"(1R,3S,5R,7R,8E,12R,14E,16E,18E,20E,22R,24S,25R,26S)-22-[(3-amino-3,6-dideoxy-beta-D-mannopyranosyl)oxy]-1,… group_key=natamycin||dimension=Environmental > media=Air > strata=Long-term; cas=7681-93-8; added Common Chemistry CAS names as altLabel: (1<em>R</em>,3<em>S</em>,5<em>R</em>,7<em>R</em>,8<em>E</em>,12<em>R</em>,14<em>E</em>,16<em>E</em>,18<em>E</em>,20<em>E</em>,22<em>R</em>,24<em>S</em>,25<em>R</em>,26<em>S</em>)-22-[(3-Amino-3,6-dideoxy-β-<span class="text-smallcaps">D</span>-mannopyranosyl)oxy]-1,3,26-trihydroxy-12-methyl-10-oxo-6,11,28-trioxatricyclo[22.3.1.0<sup>5,7</sup>]octacosa-8,14,16,18,20-pentaene-25-carboxylic acid, 6,11,28-Trioxatricyclo[22.3.1.0<sup>5,7</sup>]octacosa-8,14,16,18,20-pentaene-25-carboxylic acid, 22-[(3-amino-3,6-dideoxy-β-<span class="text-smallcaps">D</span>-mannopyranosyl)oxy]-1,3,26-trihydroxy-12-methyl-10-oxo-, (1<em>R</em>,3<em>S</em>,5<em>R</em>,7<em>R</em>,8<em>E</em>,12<em>R</em>,14<em>E</em>,16<em>E</em>,18<em>E</em>,20<em>E</em>,22<em>R</em>,24<em>S</em>,25<em>R</em>,26<em>S</em>)-, 6,11,28-Trioxatricyclo[22.3.1.0<sup>5,7</sup>]octacosa-8,14,16,18,20-pentaene-25-carboxylic acid, 22-[(3-amino-3,6-dideoxy-β-<span class="text-smallcaps">D</span>-mannopyranosyl)oxy]-1,3,26-trihydroxy-12-methyl-10-oxo-, [1<em>R</em>-(1<em>R</em>*,3<em>S</em>*,5<em>R</em>*,7<em>R</em>*,8<em>E</em>,12<em>R</em>*,14<em>E</em>,16<em>E</em>,18<em>E</em>,20<em>E</em>,22<em>R</em>*,24<em>S</em>*,25<em>R</em>*,26<em>S</em>*)]-, 6,11,28-Trioxatricyclo[22.3.1.0<sup>5,7</sup>]octacosane, pimaricin deriv., Antibiotic A 5283, Ceramax FS 150, Fungin, MeSH ID: D010866, Natamax SF, Natamax lactose, [1<em>R</em>-(1<em>R</em>*,3<em>S</em>*,5<em>R</em>*,7<em>R</em>*,8<em>E</em>,12<em>R</em>*,14<em>E</em>,16<em>E</em>,18<em>E</em>,20<em>E</em>,22<em>R</em>*,24<em>S</em>*,25<em>R</em>*,26<em>S</em>*)]-22-[(3-Amino-3,6-dideoxy-β-<span class="text-smallcaps">D</span>-mannopyranosyl)oxy]-1,3,26-trihydroxy-12-methyl-10-oxo-6,11,28-trioxatricyclo[22.3.1.0<sup>5,7</sup>]octacosa-8,14,16,18,20-pentaene-25-carboxylic acid, δ-Natamycin; object_uuid=fo-60d244efb5a7854e
269,806 consensus_match cas_match_labels {"7681-93-8":"exactMatch"} group_key=natamycin||dimension=Environmental > media=Air > strata=Long-term; group_sources=['chebi', 'ec_inventory']; cas_sources={'7681-93-8': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-60d244efb5a7854e: {'7681-93-8': 'exactMatch'}
274,312 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C33H47NO13… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C33H47NO13… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '(1R,3S,5R,7R,8E,12R,14E,16E,18E,20E,22R,24S,25R,26S)-22-[(3-amino-3,6-dideoxy-beta-D-mannopyranosyl)oxy]-1,3,26-trihydroxy-12-methyl-10-oxo-6,11,28-trioxatricyclo[22.3.1.0(5,7)]octacosa-8,14,16,18,20-pentaene-25-carboxylic acid'
280,739 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C33H47NO13… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C33H47NO13… rdkit_post_consensus from 'C[C@@H]1C/C=C/C=C/C=C/C=C/[C@H](O[C@@H]2O[C@H](C)[C@@H](O)[C@H](N)[C@@H]2O)C[C@@H]2O[C@](O)(C[C@@H](O)C[C@H]3O[C@@H]3/C=C/C(=O)O1)C[C@H](O)[C@H]2C(=O)O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
287,884 strip_catalogue_altlabels altLabel [{"@value":"(1R,3S,5R,7R,8E,12R,14E,16E,18E,20E,22R,24S,25R,26S)-22-[(3-amino-3,6-dideoxy-beta-D-mannopyranosyl)oxy]-1,… [{"@value":"(1R,3S,5R,7R,8E,12R,14E,16E,18E,20E,22R,24S,25R,26S)-22-[(3-amino-3,6-dideoxy-beta-D-mannopyranosyl)oxy]-1,… Removed 3 catalogue altLabel value(s): 'CL 12625' (grade code), 'E 235' (grade code), 'E-235' (grade code)
371,752 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/dcd1ba25-9470-… associations resolved on the elementary layer
388,608 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C33H47NO13… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C33H47NO13… typed the way the ontology types it
395,407 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
395,408 link_flows_to_their_substance roles [{"@id":"http://purl.obolibrary.org/obo/CHEBI_33286","rdfs:label":"agrochemical","http://www.w3.org/2004/02/skos/core#d… the substance's answer, copied onto its flow
395,409 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C33H47NO13… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C33H47NO13… the substance's answer, copied onto its flow

PROV-O trail

22 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T1416470405690000/3086 prefLabel ef:agent/bootstrap_labels ef:flow/dcd1ba25-9470-4672-814d-5ca400a7e57f/v0 ef:flow/dcd1ba25-9470-4672-814d-5ca400a7e57f/v1
ef:activity/change/20260820T1416470405690000/3087 name ef:agent/bootstrap_labels ef:flow/dcd1ba25-9470-4672-814d-5ca400a7e57f/v1 ef:flow/dcd1ba25-9470-4672-814d-5ca400a7e57f/v2
ef:activity/change/20260820T1416470405690000/3088 synonyms ef:agent/bootstrap_labels ef:flow/dcd1ba25-9470-4672-814d-5ca400a7e57f/v2 ef:flow/dcd1ba25-9470-4672-814d-5ca400a7e57f/v3
ef:activity/change/20260820T1416470405690000/181412 context ef:agent/default_context_mapping ef:flow/dcd1ba25-9470-4672-814d-5ca400a7e57f/v3 ef:flow/dcd1ba25-9470-4672-814d-5ca400a7e57f/v4
ef:activity/change/20260820T1416470405690000/181413 context_iri ef:agent/default_context_mapping ef:flow/dcd1ba25-9470-4672-814d-5ca400a7e57f/v4 ef:flow/dcd1ba25-9470-4672-814d-5ca400a7e57f/v5
ef:activity/change/20260820T1416470405690000/214375 unit_iri ef:agent/unit_normalization ef:flow/dcd1ba25-9470-4672-814d-5ca400a7e57f/v5 ef:flow/dcd1ba25-9470-4672-814d-5ca400a7e57f/v6
ef:activity/change/20260820T1416470405690000/221803 prefLabel ef:agent/normalize_name_case ef:flow/dcd1ba25-9470-4672-814d-5ca400a7e57f/v6 ef:flow/dcd1ba25-9470-4672-814d-5ca400a7e57f/v7
ef:activity/change/20260820T1416470405690000/230152 properties ef:agent/enrich_references ef:flow/dcd1ba25-9470-4672-814d-5ca400a7e57f/v7 ef:flow/dcd1ba25-9470-4672-814d-5ca400a7e57f/v8
ef:activity/change/20260820T1416470405690000/230153 skos_definition ef:agent/enrich_references ef:flow/dcd1ba25-9470-4672-814d-5ca400a7e57f/v8 ef:flow/dcd1ba25-9470-4672-814d-5ca400a7e57f/v9
ef:activity/change/20260820T1416470405690000/230154 references ef:agent/enrich_references ef:flow/dcd1ba25-9470-4672-814d-5ca400a7e57f/v9 ef:flow/dcd1ba25-9470-4672-814d-5ca400a7e57f/v10
ef:activity/change/20260820T1416470405690000/249182 properties ef:agent/rdkit_pre_consensus ef:flow/dcd1ba25-9470-4672-814d-5ca400a7e57f/v10 ef:flow/dcd1ba25-9470-4672-814d-5ca400a7e57f/v11
ef:activity/change/20260820T1416470405690000/254739 altLabel ef:agent/chebi_altlabels ef:flow/dcd1ba25-9470-4672-814d-5ca400a7e57f/v11 ef:flow/dcd1ba25-9470-4672-814d-5ca400a7e57f/v12
ef:activity/change/20260820T1416470405690000/269805 altLabel ef:agent/consensus_match ef:flow/dcd1ba25-9470-4672-814d-5ca400a7e57f/v12 ef:flow/dcd1ba25-9470-4672-814d-5ca400a7e57f/v13
ef:activity/change/20260820T1416470405690000/269806 cas_match_labels ef:agent/consensus_match ef:flow/dcd1ba25-9470-4672-814d-5ca400a7e57f/v13 ef:flow/dcd1ba25-9470-4672-814d-5ca400a7e57f/v14
ef:activity/change/20260820T1416470405690000/274312 properties ef:agent/opsin_iupac ef:flow/dcd1ba25-9470-4672-814d-5ca400a7e57f/v14 ef:flow/dcd1ba25-9470-4672-814d-5ca400a7e57f/v15
ef:activity/change/20260820T1416470405690000/280739 properties ef:agent/rdkit_post_consensus ef:flow/dcd1ba25-9470-4672-814d-5ca400a7e57f/v15 ef:flow/dcd1ba25-9470-4672-814d-5ca400a7e57f/v16
ef:activity/change/20260820T1416470405690000/287884 altLabel ef:agent/strip_catalogue_altlabels ef:flow/dcd1ba25-9470-4672-814d-5ca400a7e57f/v16 ef:flow/dcd1ba25-9470-4672-814d-5ca400a7e57f/v17
ef:activity/change/20260820T1416470405690000/371752 concept_associations ef:agent/carry_associations_onto_flows ef:flow/dcd1ba25-9470-4672-814d-5ca400a7e57f/v17 ef:flow/dcd1ba25-9470-4672-814d-5ca400a7e57f/v18
ef:activity/change/20260820T1416470405690000/388608 properties ef:agent/normalise_property_values ef:flow/dcd1ba25-9470-4672-814d-5ca400a7e57f/v18 ef:flow/dcd1ba25-9470-4672-814d-5ca400a7e57f/v19
ef:activity/change/20260820T1416470405690000/395407 types ef:agent/link_flows_to_their_substance ef:flow/dcd1ba25-9470-4672-814d-5ca400a7e57f/v19 ef:flow/dcd1ba25-9470-4672-814d-5ca400a7e57f/v20
ef:activity/change/20260820T1416470405690000/395408 roles ef:agent/link_flows_to_their_substance ef:flow/dcd1ba25-9470-4672-814d-5ca400a7e57f/v20 ef:flow/dcd1ba25-9470-4672-814d-5ca400a7e57f/v21
ef:activity/change/20260820T1416470405690000/395409 properties ef:agent/link_flows_to_their_substance ef:flow/dcd1ba25-9470-4672-814d-5ca400a7e57f/v21 ef:flow/dcd1ba25-9470-4672-814d-5ca400a7e57f/v22

Keyboard

?
Show or hide this map
Esc
Close

More as the sections are built.