Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 6 enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus the substance's answer, copied onto its flow
altLabel 3 chebi_altlabels, consensus_match, substance_label_v1 demoted by the substance's name: Cadmium (ii)
prefLabel 3 bootstrap_labels, normalize_name_case, substance_label_v1 the substance's name: Cadmium(2+)
cas_match_labels 1 consensus_match group_key=cadmium(ii)||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi']; cas_sources={'22537-48-0': ['chebi']}; assigned CAS labels from group consensus; object_uuid=fo-31ab226b5e0a22ac: {'22537-48-0': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['22537-48-0']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_48775']; candidate_pubchem_cids=[31193]; selected_pubchem_cids=[31193]; formula_similarity_expected=['Cd']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

22
# Step Field From To Why
5,941 bootstrap_labels prefLabel [{"@value":"cadmium (ii)","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"c… Bootstrapped prefLabel from legacy name field
5,942 bootstrap_labels name cadmium (ii) Purged legacy name field to enforce prefLabel usage
5,943 bootstrap_labels synonyms ["element in usetox"] [] Removed legacy synonyms field in favor of structured labels
181,678 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
181,679 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
215,330 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
222,472 normalize_name_case prefLabel [{"@value":"cadmium (ii)","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"c… [{"@value":"Cadmium (ii)","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"c… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
232,902 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cd","Cd+2"… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
232,903 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
232,904 enrich_references references [] [{"@id":"gmelin:6851","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"conse… Added references with provenance; cas_numbers=['22537-48-0']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_48775']; candidate_pubchem_cids=[31193]; selected_pubchem_cids=[31193]; formula_similarity_expected=['Cd']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
249,970 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cd","Cd+2"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cd","Cd+2"… rdkit_pre_consensus from '[Cd+2]'; added: monoisotopic_mass
255,129 chebi_altlabels altLabel [] [{"@value":"CADMIUM ION","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"con… Added 7 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
264,734 consensus_match altLabel [{"@value":"CADMIUM ION","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"con… [{"@value":"CADMIUM ION","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"con… group_key=cadmium(ii)||dimension=Environmental > media=Ground > geography=Agricultural; cas=22537-48-0; added Common Chemistry CAS names as altLabel: Cadmium cation, Cd(II); object_uuid=fo-31ab226b5e0a22ac
264,735 consensus_match cas_match_labels {"22537-48-0":"exactMatch"} group_key=cadmium(ii)||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi']; cas_sources={'22537-48-0': ['chebi']}; assigned CAS labels from group consensus; object_uuid=fo-31ab226b5e0a22ac: {'22537-48-0': 'exactMatch'}
275,117 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cd","Cd+2"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cd","Cd+2"… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Cadmium (ii)'
281,610 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cd","Cd+2"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cd","Cd+2"… rdkit_post_consensus from '[Cd+2]'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
371,885 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/dd4a61a7-ea1d-… associations resolved on the elementary layer
389,425 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cd","Cd+2"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cd","Cd+2"… typed the way the ontology types it
396,562 link_flows_to_their_substance types ["https://w3id.org/chemrof/AtomCation"] the substance's answer, copied onto its flow
396,563 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cd","Cd+2"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cd","Cd+2"… the substance's answer, copied onto its flow
403,892 substance_label_v1 altLabel [{"@value":"CADMIUM ION","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"con… [{"@value":"CADMIUM ION","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"con… demoted by the substance's name: Cadmium (ii)
403,893 substance_label_v1 prefLabel [{"@value":"Cadmium (ii)","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"c… [{"@value":"Cadmium(2+)","@language":"en","@lang":"en","source":{"prov:wasGeneratedBy":"substance_label_v1","prov:wasAt… the substance's name: Cadmium(2+)

PROV-O trail

22 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T1416470405690000/5941 prefLabel ef:agent/bootstrap_labels ef:flow/dd4a61a7-ea1d-4d8b-8d8a-86b5a33c6c4b/v0 ef:flow/dd4a61a7-ea1d-4d8b-8d8a-86b5a33c6c4b/v1
ef:activity/change/20260820T1416470405690000/5942 name ef:agent/bootstrap_labels ef:flow/dd4a61a7-ea1d-4d8b-8d8a-86b5a33c6c4b/v1 ef:flow/dd4a61a7-ea1d-4d8b-8d8a-86b5a33c6c4b/v2
ef:activity/change/20260820T1416470405690000/5943 synonyms ef:agent/bootstrap_labels ef:flow/dd4a61a7-ea1d-4d8b-8d8a-86b5a33c6c4b/v2 ef:flow/dd4a61a7-ea1d-4d8b-8d8a-86b5a33c6c4b/v3
ef:activity/change/20260820T1416470405690000/181678 context ef:agent/default_context_mapping ef:flow/dd4a61a7-ea1d-4d8b-8d8a-86b5a33c6c4b/v3 ef:flow/dd4a61a7-ea1d-4d8b-8d8a-86b5a33c6c4b/v4
ef:activity/change/20260820T1416470405690000/181679 context_iri ef:agent/default_context_mapping ef:flow/dd4a61a7-ea1d-4d8b-8d8a-86b5a33c6c4b/v4 ef:flow/dd4a61a7-ea1d-4d8b-8d8a-86b5a33c6c4b/v5
ef:activity/change/20260820T1416470405690000/215330 unit_iri ef:agent/unit_normalization ef:flow/dd4a61a7-ea1d-4d8b-8d8a-86b5a33c6c4b/v5 ef:flow/dd4a61a7-ea1d-4d8b-8d8a-86b5a33c6c4b/v6
ef:activity/change/20260820T1416470405690000/222472 prefLabel ef:agent/normalize_name_case ef:flow/dd4a61a7-ea1d-4d8b-8d8a-86b5a33c6c4b/v6 ef:flow/dd4a61a7-ea1d-4d8b-8d8a-86b5a33c6c4b/v7
ef:activity/change/20260820T1416470405690000/232902 properties ef:agent/enrich_references ef:flow/dd4a61a7-ea1d-4d8b-8d8a-86b5a33c6c4b/v7 ef:flow/dd4a61a7-ea1d-4d8b-8d8a-86b5a33c6c4b/v8
ef:activity/change/20260820T1416470405690000/232903 skos_definition ef:agent/enrich_references ef:flow/dd4a61a7-ea1d-4d8b-8d8a-86b5a33c6c4b/v8 ef:flow/dd4a61a7-ea1d-4d8b-8d8a-86b5a33c6c4b/v9
ef:activity/change/20260820T1416470405690000/232904 references ef:agent/enrich_references ef:flow/dd4a61a7-ea1d-4d8b-8d8a-86b5a33c6c4b/v9 ef:flow/dd4a61a7-ea1d-4d8b-8d8a-86b5a33c6c4b/v10
ef:activity/change/20260820T1416470405690000/249970 properties ef:agent/rdkit_pre_consensus ef:flow/dd4a61a7-ea1d-4d8b-8d8a-86b5a33c6c4b/v10 ef:flow/dd4a61a7-ea1d-4d8b-8d8a-86b5a33c6c4b/v11
ef:activity/change/20260820T1416470405690000/255129 altLabel ef:agent/chebi_altlabels ef:flow/dd4a61a7-ea1d-4d8b-8d8a-86b5a33c6c4b/v11 ef:flow/dd4a61a7-ea1d-4d8b-8d8a-86b5a33c6c4b/v12
ef:activity/change/20260820T1416470405690000/264734 altLabel ef:agent/consensus_match ef:flow/dd4a61a7-ea1d-4d8b-8d8a-86b5a33c6c4b/v12 ef:flow/dd4a61a7-ea1d-4d8b-8d8a-86b5a33c6c4b/v13
ef:activity/change/20260820T1416470405690000/264735 cas_match_labels ef:agent/consensus_match ef:flow/dd4a61a7-ea1d-4d8b-8d8a-86b5a33c6c4b/v13 ef:flow/dd4a61a7-ea1d-4d8b-8d8a-86b5a33c6c4b/v14
ef:activity/change/20260820T1416470405690000/275117 properties ef:agent/opsin_iupac ef:flow/dd4a61a7-ea1d-4d8b-8d8a-86b5a33c6c4b/v14 ef:flow/dd4a61a7-ea1d-4d8b-8d8a-86b5a33c6c4b/v15
ef:activity/change/20260820T1416470405690000/281610 properties ef:agent/rdkit_post_consensus ef:flow/dd4a61a7-ea1d-4d8b-8d8a-86b5a33c6c4b/v15 ef:flow/dd4a61a7-ea1d-4d8b-8d8a-86b5a33c6c4b/v16
ef:activity/change/20260820T1416470405690000/371885 concept_associations ef:agent/carry_associations_onto_flows ef:flow/dd4a61a7-ea1d-4d8b-8d8a-86b5a33c6c4b/v16 ef:flow/dd4a61a7-ea1d-4d8b-8d8a-86b5a33c6c4b/v17
ef:activity/change/20260820T1416470405690000/389425 properties ef:agent/normalise_property_values ef:flow/dd4a61a7-ea1d-4d8b-8d8a-86b5a33c6c4b/v17 ef:flow/dd4a61a7-ea1d-4d8b-8d8a-86b5a33c6c4b/v18
ef:activity/change/20260820T1416470405690000/396562 types ef:agent/link_flows_to_their_substance ef:flow/dd4a61a7-ea1d-4d8b-8d8a-86b5a33c6c4b/v18 ef:flow/dd4a61a7-ea1d-4d8b-8d8a-86b5a33c6c4b/v19
ef:activity/change/20260820T1416470405690000/396563 properties ef:agent/link_flows_to_their_substance ef:flow/dd4a61a7-ea1d-4d8b-8d8a-86b5a33c6c4b/v19 ef:flow/dd4a61a7-ea1d-4d8b-8d8a-86b5a33c6c4b/v20
ef:activity/change/20260820T1416470405690000/403892 altLabel ef:agent/substance_label_v1 ef:flow/dd4a61a7-ea1d-4d8b-8d8a-86b5a33c6c4b/v20 ef:flow/dd4a61a7-ea1d-4d8b-8d8a-86b5a33c6c4b/v21
ef:activity/change/20260820T1416470405690000/403893 prefLabel ef:agent/substance_label_v1 ef:flow/dd4a61a7-ea1d-4d8b-8d8a-86b5a33c6c4b/v21 ef:flow/dd4a61a7-ea1d-4d8b-8d8a-86b5a33c6c4b/v22

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