Tryptamine
Everything that changed this flow. Back to the flow
df21c00c-b2b0-48d8-b28f-a6d1389d5197
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 4 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 1 catalogue altLabel value(s): 'NSC 165212' (registry code) |
| prefLabel | 2 | bootstrap_labels, consensus_match | cas=61-54-1; cc_chebi_agreed_name='Tryptamine'; object_uuid=fo-a914789ae3afdcf9 |
| cas_match_labels | 1 | consensus_match | group_key=2-(1h-indol-3-yl)ethanamine||dimension=Environmental > media=Ground > geography=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'61-54-1': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-a914789ae3afdcf9: {'61-54-1': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['61-54-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_16765']; candidate_pubchem_cids=[1150, 3985862, 53429643]; selected_pubchem_cids=[1150]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
21| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 15,289 | bootstrap_labels | prefLabel | — | [{"@value":"2-(1h-indol-3-yl)ethanamine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasA… | Bootstrapped prefLabel from legacy name field |
| 15,290 | bootstrap_labels | name | 2-(1h-indol-3-yl)ethanamine | — | Purged legacy name field to enforce prefLabel usage |
| 15,291 | bootstrap_labels | synonyms | ["organic","2-(indol-3-yl)ethylamine"] | [] | Removed legacy synonyms field in favor of structured labels |
| 182,702 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Ground level","population_density":"Urban (>1000 people/square mil… | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| 182,703 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-grle-ur10pesq | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| 218,371 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 241,611 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H12N2"]… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 241,612 | enrich_references | skos_definition | — | [{"@value":"An aminoalkylindole consisting of indole having a 2-aminoethyl group at the 3-position.","@language":"en","… | Merged ChEBI/PubChem definitions into skos:definition |
| 241,613 | enrich_references | references | [] | [{"@id":"gmelin:603448","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"con… | Added references with provenance; cas_numbers=['61-54-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_16765']; candidate_pubchem_cids=[1150, 3985862, 53429643]; selected_pubchem_cids=[1150]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 252,475 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H12N2"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H12N2"]… | rdkit_pre_consensus from 'C1=CC=C2C(=C1)C(=CN2)CCN'; added: monoisotopic_mass |
| 256,407 | chebi_altlabels | altLabel | [] | [{"@value":"1H-indole-3-ethanamine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribu… | Added 4 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 260,196 | consensus_match | prefLabel | [{"@value":"2-(1h-indol-3-yl)ethanamine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasA… | [{"@value":"Tryptamine","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"cons… | cas=61-54-1; cc_chebi_agreed_name='Tryptamine'; object_uuid=fo-a914789ae3afdcf9 |
| 260,197 | consensus_match | altLabel | [{"@value":"1H-indole-3-ethanamine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribu… | [{"@value":"1H-indole-3-ethanamine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribu… | cas=61-54-1; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-a914789ae3afdcf9 |
| 260,198 | consensus_match | altLabel | [{"@value":"1H-indole-3-ethanamine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribu… | [{"@value":"1H-indole-3-ethanamine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribu… | group_key=2-(1h-indol-3-yl)ethanamine||dimension=Environmental > media=Ground > geography=Unknown; cas=61-54-1; added Common Chemistry CAS names as altLabel: 2-(1<em>H</em>-Indol-3-yl)ethan-1-amine, 2-(1<em>H</em>-Indol-3-yl)ethylamine, 3-(2-Aminoethyl)-1<em>H</em>-indole, 3-Indoleethanamine, 3-Indoleethylamine, Indole, 3-(2-aminoethyl)-, NSC 165212, Tryptamin, β-(3-Indolyl)ethylamine; object_uuid=fo-a914789ae3afdcf9 |
| 260,199 | consensus_match | cas_match_labels | — | {"61-54-1":"exactMatch"} | group_key=2-(1h-indol-3-yl)ethanamine||dimension=Environmental > media=Ground > geography=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'61-54-1': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-a914789ae3afdcf9: {'61-54-1': 'exactMatch'} |
| 277,671 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H12N2"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H12N2"]… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Tryptamine' |
| 284,370 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H12N2"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H12N2"]… | rdkit_post_consensus from 'NCCc1c[nH]c2ccccc12'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 290,373 | strip_catalogue_altlabels | altLabel | [{"@value":"1H-indole-3-ethanamine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribu… | [{"@value":"1H-indole-3-ethanamine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribu… | Removed 1 catalogue altLabel value(s): 'NSC 165212' (registry code) |
| 372,377 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/df21c00c-b2b0-… | associations resolved on the elementary layer |
| 392,025 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H12N2"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H12N2"]… | typed the way the ontology types it |
| 400,310 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
PROV-O trail
21 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260821T1302361922970000/15289 | prefLabel | ef:agent/bootstrap_labels | ef:flow/df21c00c-b2b0-48d8-b28f-a6d1389d5197/v0 | ef:flow/df21c00c-b2b0-48d8-b28f-a6d1389d5197/v1 |
| ef:activity/change/20260821T1302361922970000/15290 | name | ef:agent/bootstrap_labels | ef:flow/df21c00c-b2b0-48d8-b28f-a6d1389d5197/v1 | ef:flow/df21c00c-b2b0-48d8-b28f-a6d1389d5197/v2 |
| ef:activity/change/20260821T1302361922970000/15291 | synonyms | ef:agent/bootstrap_labels | ef:flow/df21c00c-b2b0-48d8-b28f-a6d1389d5197/v2 | ef:flow/df21c00c-b2b0-48d8-b28f-a6d1389d5197/v3 |
| ef:activity/change/20260821T1302361922970000/182702 | context | ef:agent/default_context_mapping | ef:flow/df21c00c-b2b0-48d8-b28f-a6d1389d5197/v3 | ef:flow/df21c00c-b2b0-48d8-b28f-a6d1389d5197/v4 |
| ef:activity/change/20260821T1302361922970000/182703 | context_iri | ef:agent/default_context_mapping | ef:flow/df21c00c-b2b0-48d8-b28f-a6d1389d5197/v4 | ef:flow/df21c00c-b2b0-48d8-b28f-a6d1389d5197/v5 |
| ef:activity/change/20260821T1302361922970000/218371 | unit_iri | ef:agent/unit_normalization | ef:flow/df21c00c-b2b0-48d8-b28f-a6d1389d5197/v5 | ef:flow/df21c00c-b2b0-48d8-b28f-a6d1389d5197/v6 |
| ef:activity/change/20260821T1302361922970000/241611 | properties | ef:agent/enrich_references | ef:flow/df21c00c-b2b0-48d8-b28f-a6d1389d5197/v6 | ef:flow/df21c00c-b2b0-48d8-b28f-a6d1389d5197/v7 |
| ef:activity/change/20260821T1302361922970000/241612 | skos_definition | ef:agent/enrich_references | ef:flow/df21c00c-b2b0-48d8-b28f-a6d1389d5197/v7 | ef:flow/df21c00c-b2b0-48d8-b28f-a6d1389d5197/v8 |
| ef:activity/change/20260821T1302361922970000/241613 | references | ef:agent/enrich_references | ef:flow/df21c00c-b2b0-48d8-b28f-a6d1389d5197/v8 | ef:flow/df21c00c-b2b0-48d8-b28f-a6d1389d5197/v9 |
| ef:activity/change/20260821T1302361922970000/252475 | properties | ef:agent/rdkit_pre_consensus | ef:flow/df21c00c-b2b0-48d8-b28f-a6d1389d5197/v9 | ef:flow/df21c00c-b2b0-48d8-b28f-a6d1389d5197/v10 |
| ef:activity/change/20260821T1302361922970000/256407 | altLabel | ef:agent/chebi_altlabels | ef:flow/df21c00c-b2b0-48d8-b28f-a6d1389d5197/v10 | ef:flow/df21c00c-b2b0-48d8-b28f-a6d1389d5197/v11 |
| ef:activity/change/20260821T1302361922970000/260196 | prefLabel | ef:agent/consensus_match | ef:flow/df21c00c-b2b0-48d8-b28f-a6d1389d5197/v11 | ef:flow/df21c00c-b2b0-48d8-b28f-a6d1389d5197/v12 |
| ef:activity/change/20260821T1302361922970000/260197 | altLabel | ef:agent/consensus_match | ef:flow/df21c00c-b2b0-48d8-b28f-a6d1389d5197/v12 | ef:flow/df21c00c-b2b0-48d8-b28f-a6d1389d5197/v13 |
| ef:activity/change/20260821T1302361922970000/260198 | altLabel | ef:agent/consensus_match | ef:flow/df21c00c-b2b0-48d8-b28f-a6d1389d5197/v13 | ef:flow/df21c00c-b2b0-48d8-b28f-a6d1389d5197/v14 |
| ef:activity/change/20260821T1302361922970000/260199 | cas_match_labels | ef:agent/consensus_match | ef:flow/df21c00c-b2b0-48d8-b28f-a6d1389d5197/v14 | ef:flow/df21c00c-b2b0-48d8-b28f-a6d1389d5197/v15 |
| ef:activity/change/20260821T1302361922970000/277671 | properties | ef:agent/opsin_iupac | ef:flow/df21c00c-b2b0-48d8-b28f-a6d1389d5197/v15 | ef:flow/df21c00c-b2b0-48d8-b28f-a6d1389d5197/v16 |
| ef:activity/change/20260821T1302361922970000/284370 | properties | ef:agent/rdkit_post_consensus | ef:flow/df21c00c-b2b0-48d8-b28f-a6d1389d5197/v16 | ef:flow/df21c00c-b2b0-48d8-b28f-a6d1389d5197/v17 |
| ef:activity/change/20260821T1302361922970000/290373 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/df21c00c-b2b0-48d8-b28f-a6d1389d5197/v17 | ef:flow/df21c00c-b2b0-48d8-b28f-a6d1389d5197/v18 |
| ef:activity/change/20260821T1302361922970000/372377 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/df21c00c-b2b0-48d8-b28f-a6d1389d5197/v18 | ef:flow/df21c00c-b2b0-48d8-b28f-a6d1389d5197/v19 |
| ef:activity/change/20260821T1302361922970000/392025 | properties | ef:agent/normalise_property_values | ef:flow/df21c00c-b2b0-48d8-b28f-a6d1389d5197/v19 | ef:flow/df21c00c-b2b0-48d8-b28f-a6d1389d5197/v20 |
| ef:activity/change/20260821T1302361922970000/400310 | types | ef:agent/link_flows_to_their_substance | ef:flow/df21c00c-b2b0-48d8-b28f-a6d1389d5197/v20 | ef:flow/df21c00c-b2b0-48d8-b28f-a6d1389d5197/v21 |