Geranial
Everything that changed this flow. Back to the flow
e233ab47-6b4e-4953-b861-7af195dcd879
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 6 | enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | the substance's answer, copied onto its flow |
| altLabel | 4 | chebi_altlabels, consensus_match, dedupe_altlabels | Deduplicated altLabel values and removed entries matching prefLabel |
| prefLabel | 2 | bootstrap_labels, consensus_match | cas=141-27-5; cc_chebi_agreed_name='Geranial'; object_uuid=fo-2003b5ba8b724bcc |
| cas_match_labels | 1 | consensus_match | group_key=(e)-3,7-dimethylocta-2,6-dienal||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory']; cas_sources={'141-27-5': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-2003b5ba8b724bcc: {'141-27-5': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['141-27-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_16980']; candidate_pubchem_cids=[8843, 638011]; selected_pubchem_cids=[638011]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
22| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 4,657 | bootstrap_labels | prefLabel | — | [{"@value":"(e)-3,7-dimethylocta-2,6-dienal","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:… | Bootstrapped prefLabel from legacy name field |
| 4,658 | bootstrap_labels | name | (e)-3,7-dimethylocta-2,6-dienal | — | Purged legacy name field to enforce prefLabel usage |
| 4,659 | bootstrap_labels | synonyms | ["(e)-3,7-dimethylocta-2,6-dienal","(e)-3,7-dimethyl-2,6-octadienal","2,6-octadienal, 3,7-dimethyl-, (e)-","(2e)-3,7-di… | [] | Removed legacy synonyms field in favor of structured labels |
| 184,458 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Aircraft cruise height"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere |
| 184,459 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-aicrhe | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere |
| 214,895 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 231,657 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16O"],… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 231,658 | enrich_references | skos_definition | — | [{"@value":"A monoterpenoid that is (2E,6E)-octa-2,6-dienal substituted by methyl groups at positions 3 and 7.","@langu… | Merged ChEBI/PubChem definitions into skos:definition |
| 231,659 | enrich_references | references | [] | [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J2.026E","provenance":{"prov:wasGeneratedBy":"enrich_reference… | Added references with provenance; cas_numbers=['141-27-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_16980']; candidate_pubchem_cids=[8843, 638011]; selected_pubchem_cids=[638011]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 249,604 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16O"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16O"],… | rdkit_pre_consensus from 'CC(=CCC/C(=C/C=O)/C)C'; added: monoisotopic_mass |
| 254,964 | chebi_altlabels | altLabel | [] | [{"@value":"(2E)-3,7-dimethylocta-2,6-dienal","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:… | Added 10 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 257,824 | consensus_match | prefLabel | [{"@value":"(e)-3,7-dimethylocta-2,6-dienal","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:… | [{"@value":"Geranial","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"consen… | cas=141-27-5; cc_chebi_agreed_name='Geranial'; object_uuid=fo-2003b5ba8b724bcc |
| 257,825 | consensus_match | altLabel | [{"@value":"(2E)-3,7-dimethylocta-2,6-dienal","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:… | [{"@value":"(2E)-3,7-dimethylocta-2,6-dienal","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:… | cas=141-27-5; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-2003b5ba8b724bcc |
| 257,826 | consensus_match | altLabel | [{"@value":"(2E)-3,7-dimethylocta-2,6-dienal","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:… | [{"@value":"(2E)-3,7-dimethylocta-2,6-dienal","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:… | group_key=(e)-3,7-dimethylocta-2,6-dienal||dimension=Environmental > media=Air > strata=Unknown; cas=141-27-5; added Common Chemistry CAS names as altLabel: (2<em>E</em>)-3,7-Dimethyl-2,6-octadien-1-al, (2<em>E</em>)-3,7-Dimethyl-2,6-octadienal, (<em>E</em>)-3,7-Dimethyl-2,6-octadienal, (<em>E</em>)-Neral, 2,6-Octadienal, 3,7-dimethyl-, (2<em>E</em>)-, 2,6-Octadienal, 3,7-dimethyl-, (<em>E</em>)-, <em>trans</em>-3,7-Dimethyl-2,6-octadien-1-al, <em>trans</em>-3,7-Dimethyl-2,6-octadienal, <em>trans</em>-Geranial, E-Citral, Geranaldehyde, α-Citral, β-Geranial, β-Neral; object_uuid=fo-2003b5ba8b724bcc |
| 257,827 | consensus_match | cas_match_labels | — | {"141-27-5":"exactMatch"} | group_key=(e)-3,7-dimethylocta-2,6-dienal||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory']; cas_sources={'141-27-5': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-2003b5ba8b724bcc: {'141-27-5': 'exactMatch'} |
| 274,734 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16O"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16O"],… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Geranial' |
| 281,200 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16O"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16O"],… | rdkit_post_consensus from 'CC(C)=CCC/C(C)=C/C=O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 292,217 | dedupe_altlabels | altLabel | [{"@value":"(2E)-3,7-dimethylocta-2,6-dienal","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:… | [{"@value":"(2E)-3,7-dimethylocta-2,6-dienal","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:… | Deduplicated altLabel values and removed entries matching prefLabel |
| 373,256 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/e233ab47-6b4e-… | associations resolved on the elementary layer |
| 389,043 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16O"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16O"],… | typed the way the ontology types it |
| 396,031 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
| 396,032 | link_flows_to_their_substance | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16O"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H16O"],… | the substance's answer, copied onto its flow |
PROV-O trail
22 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260822T0600486828500000/4657 | prefLabel | ef:agent/bootstrap_labels | ef:flow/e233ab47-6b4e-4953-b861-7af195dcd879/v0 | ef:flow/e233ab47-6b4e-4953-b861-7af195dcd879/v1 |
| ef:activity/change/20260822T0600486828500000/4658 | name | ef:agent/bootstrap_labels | ef:flow/e233ab47-6b4e-4953-b861-7af195dcd879/v1 | ef:flow/e233ab47-6b4e-4953-b861-7af195dcd879/v2 |
| ef:activity/change/20260822T0600486828500000/4659 | synonyms | ef:agent/bootstrap_labels | ef:flow/e233ab47-6b4e-4953-b861-7af195dcd879/v2 | ef:flow/e233ab47-6b4e-4953-b861-7af195dcd879/v3 |
| ef:activity/change/20260822T0600486828500000/184458 | context | ef:agent/default_context_mapping | ef:flow/e233ab47-6b4e-4953-b861-7af195dcd879/v3 | ef:flow/e233ab47-6b4e-4953-b861-7af195dcd879/v4 |
| ef:activity/change/20260822T0600486828500000/184459 | context_iri | ef:agent/default_context_mapping | ef:flow/e233ab47-6b4e-4953-b861-7af195dcd879/v4 | ef:flow/e233ab47-6b4e-4953-b861-7af195dcd879/v5 |
| ef:activity/change/20260822T0600486828500000/214895 | unit_iri | ef:agent/unit_normalization | ef:flow/e233ab47-6b4e-4953-b861-7af195dcd879/v5 | ef:flow/e233ab47-6b4e-4953-b861-7af195dcd879/v6 |
| ef:activity/change/20260822T0600486828500000/231657 | properties | ef:agent/enrich_references | ef:flow/e233ab47-6b4e-4953-b861-7af195dcd879/v6 | ef:flow/e233ab47-6b4e-4953-b861-7af195dcd879/v7 |
| ef:activity/change/20260822T0600486828500000/231658 | skos_definition | ef:agent/enrich_references | ef:flow/e233ab47-6b4e-4953-b861-7af195dcd879/v7 | ef:flow/e233ab47-6b4e-4953-b861-7af195dcd879/v8 |
| ef:activity/change/20260822T0600486828500000/231659 | references | ef:agent/enrich_references | ef:flow/e233ab47-6b4e-4953-b861-7af195dcd879/v8 | ef:flow/e233ab47-6b4e-4953-b861-7af195dcd879/v9 |
| ef:activity/change/20260822T0600486828500000/249604 | properties | ef:agent/rdkit_pre_consensus | ef:flow/e233ab47-6b4e-4953-b861-7af195dcd879/v9 | ef:flow/e233ab47-6b4e-4953-b861-7af195dcd879/v10 |
| ef:activity/change/20260822T0600486828500000/254964 | altLabel | ef:agent/chebi_altlabels | ef:flow/e233ab47-6b4e-4953-b861-7af195dcd879/v10 | ef:flow/e233ab47-6b4e-4953-b861-7af195dcd879/v11 |
| ef:activity/change/20260822T0600486828500000/257824 | prefLabel | ef:agent/consensus_match | ef:flow/e233ab47-6b4e-4953-b861-7af195dcd879/v11 | ef:flow/e233ab47-6b4e-4953-b861-7af195dcd879/v12 |
| ef:activity/change/20260822T0600486828500000/257825 | altLabel | ef:agent/consensus_match | ef:flow/e233ab47-6b4e-4953-b861-7af195dcd879/v12 | ef:flow/e233ab47-6b4e-4953-b861-7af195dcd879/v13 |
| ef:activity/change/20260822T0600486828500000/257826 | altLabel | ef:agent/consensus_match | ef:flow/e233ab47-6b4e-4953-b861-7af195dcd879/v13 | ef:flow/e233ab47-6b4e-4953-b861-7af195dcd879/v14 |
| ef:activity/change/20260822T0600486828500000/257827 | cas_match_labels | ef:agent/consensus_match | ef:flow/e233ab47-6b4e-4953-b861-7af195dcd879/v14 | ef:flow/e233ab47-6b4e-4953-b861-7af195dcd879/v15 |
| ef:activity/change/20260822T0600486828500000/274734 | properties | ef:agent/opsin_iupac | ef:flow/e233ab47-6b4e-4953-b861-7af195dcd879/v15 | ef:flow/e233ab47-6b4e-4953-b861-7af195dcd879/v16 |
| ef:activity/change/20260822T0600486828500000/281200 | properties | ef:agent/rdkit_post_consensus | ef:flow/e233ab47-6b4e-4953-b861-7af195dcd879/v16 | ef:flow/e233ab47-6b4e-4953-b861-7af195dcd879/v17 |
| ef:activity/change/20260822T0600486828500000/292217 | altLabel | ef:agent/dedupe_altlabels | ef:flow/e233ab47-6b4e-4953-b861-7af195dcd879/v17 | ef:flow/e233ab47-6b4e-4953-b861-7af195dcd879/v18 |
| ef:activity/change/20260822T0600486828500000/373256 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/e233ab47-6b4e-4953-b861-7af195dcd879/v18 | ef:flow/e233ab47-6b4e-4953-b861-7af195dcd879/v19 |
| ef:activity/change/20260822T0600486828500000/389043 | properties | ef:agent/normalise_property_values | ef:flow/e233ab47-6b4e-4953-b861-7af195dcd879/v19 | ef:flow/e233ab47-6b4e-4953-b861-7af195dcd879/v20 |
| ef:activity/change/20260822T0600486828500000/396031 | types | ef:agent/link_flows_to_their_substance | ef:flow/e233ab47-6b4e-4953-b861-7af195dcd879/v20 | ef:flow/e233ab47-6b4e-4953-b861-7af195dcd879/v21 |
| ef:activity/change/20260822T0600486828500000/396032 | properties | ef:agent/link_flows_to_their_substance | ef:flow/e233ab47-6b4e-4953-b861-7af195dcd879/v21 | ef:flow/e233ab47-6b4e-4953-b861-7af195dcd879/v22 |