Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 4 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 2 catalogue altLabel value(s): 'RC 0270' (grade code), 'RC 270' (grade code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=cyclopropane||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'75-19-4': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-fe2df464bbfa4d3e: {'75-19-4': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
ec_numbers 1 ec_cross_check Resolved from EC-inventory: 200-847-8 from CAS 75-19-4
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['75-19-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_30365']; candidate_pubchem_cids=[6351]; selected_pubchem_cids=[6351]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

20
# Step Field From To Why
25,498 bootstrap_labels prefLabel [{"@value":"cyclopropane","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"c… Bootstrapped prefLabel from legacy name field
25,499 bootstrap_labels name cyclopropane Purged legacy name field to enforce prefLabel usage
25,500 bootstrap_labels synonyms ["AC1L1MC6","Cyclopropan","Cyclopropane [Anaesthetics, volatile]","RC 270","Trimethylene","Trimethylene (cyclic)","Zykl… [] Removed legacy synonyms field in favor of structured labels
184,986 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
184,987 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
221,017 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
226,604 normalize_name_case prefLabel [{"@value":"cyclopropane","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"c… [{"@value":"Cyclopropane","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"c… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
227,124 ec_cross_check ec_numbers [] ["200-847-8"] Resolved from EC-inventory: 200-847-8 from CAS 75-19-4
248,226 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H6"],"at… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
248,227 enrich_references skos_definition [{"@value":"A cycloalkane composed of three carbon atoms to form a ring.","@language":"en","provenance":{"prov:wasGener… Merged ChEBI/PubChem definitions into skos:definition
248,228 enrich_references references [] [{"@id":"gmelin:635","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"consen… Added references with provenance; cas_numbers=['75-19-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_30365']; candidate_pubchem_cids=[6351]; selected_pubchem_cids=[6351]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
257,388 chebi_altlabels altLabel [] [{"@value":"Cyclopropan","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"con… Added 5 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
265,480 consensus_match altLabel [{"@value":"Cyclopropan","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"con… [{"@value":"Cyclopropan","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"con… group_key=cyclopropane||dimension=Environmental > media=Ground > geography=Agricultural; cas=75-19-4; added Common Chemistry CAS names as altLabel: RC 0270, RC 270, Trimethylene (cyclic); object_uuid=fo-fe2df464bbfa4d3e
265,481 consensus_match cas_match_labels {"75-19-4":"exactMatch"} group_key=cyclopropane||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'75-19-4': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-fe2df464bbfa4d3e: {'75-19-4': 'exactMatch'}
279,724 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H6"],"at… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H6"],"at… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Cyclopropane'
286,618 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H6"],"at… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H6"],"at… rdkit_post_consensus from 'C1CC1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
291,841 strip_catalogue_altlabels altLabel [{"@value":"Cyclopropan","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"con… [{"@value":"Cyclopropan","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"con… Removed 2 catalogue altLabel value(s): 'RC 0270' (grade code), 'RC 270' (grade code)
373,520 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/e2fa688c-6555-… associations resolved on the elementary layer
394,131 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H6"],"at… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H6"],"at… typed the way the ontology types it
403,656 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

20 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260822T0600486828500000/25498 prefLabel ef:agent/bootstrap_labels ef:flow/e2fa688c-6555-11dd-ad8b-0800200c9a66/v0 ef:flow/e2fa688c-6555-11dd-ad8b-0800200c9a66/v1
ef:activity/change/20260822T0600486828500000/25499 name ef:agent/bootstrap_labels ef:flow/e2fa688c-6555-11dd-ad8b-0800200c9a66/v1 ef:flow/e2fa688c-6555-11dd-ad8b-0800200c9a66/v2
ef:activity/change/20260822T0600486828500000/25500 synonyms ef:agent/bootstrap_labels ef:flow/e2fa688c-6555-11dd-ad8b-0800200c9a66/v2 ef:flow/e2fa688c-6555-11dd-ad8b-0800200c9a66/v3
ef:activity/change/20260822T0600486828500000/184986 context ef:agent/default_context_mapping ef:flow/e2fa688c-6555-11dd-ad8b-0800200c9a66/v3 ef:flow/e2fa688c-6555-11dd-ad8b-0800200c9a66/v4
ef:activity/change/20260822T0600486828500000/184987 context_iri ef:agent/default_context_mapping ef:flow/e2fa688c-6555-11dd-ad8b-0800200c9a66/v4 ef:flow/e2fa688c-6555-11dd-ad8b-0800200c9a66/v5
ef:activity/change/20260822T0600486828500000/221017 unit_iri ef:agent/unit_normalization ef:flow/e2fa688c-6555-11dd-ad8b-0800200c9a66/v5 ef:flow/e2fa688c-6555-11dd-ad8b-0800200c9a66/v6
ef:activity/change/20260822T0600486828500000/226604 prefLabel ef:agent/normalize_name_case ef:flow/e2fa688c-6555-11dd-ad8b-0800200c9a66/v6 ef:flow/e2fa688c-6555-11dd-ad8b-0800200c9a66/v7
ef:activity/change/20260822T0600486828500000/227124 ec_numbers ef:agent/ec_cross_check ef:flow/e2fa688c-6555-11dd-ad8b-0800200c9a66/v7 ef:flow/e2fa688c-6555-11dd-ad8b-0800200c9a66/v8
ef:activity/change/20260822T0600486828500000/248226 properties ef:agent/enrich_references ef:flow/e2fa688c-6555-11dd-ad8b-0800200c9a66/v8 ef:flow/e2fa688c-6555-11dd-ad8b-0800200c9a66/v9
ef:activity/change/20260822T0600486828500000/248227 skos_definition ef:agent/enrich_references ef:flow/e2fa688c-6555-11dd-ad8b-0800200c9a66/v9 ef:flow/e2fa688c-6555-11dd-ad8b-0800200c9a66/v10
ef:activity/change/20260822T0600486828500000/248228 references ef:agent/enrich_references ef:flow/e2fa688c-6555-11dd-ad8b-0800200c9a66/v10 ef:flow/e2fa688c-6555-11dd-ad8b-0800200c9a66/v11
ef:activity/change/20260822T0600486828500000/257388 altLabel ef:agent/chebi_altlabels ef:flow/e2fa688c-6555-11dd-ad8b-0800200c9a66/v11 ef:flow/e2fa688c-6555-11dd-ad8b-0800200c9a66/v12
ef:activity/change/20260822T0600486828500000/265480 altLabel ef:agent/consensus_match ef:flow/e2fa688c-6555-11dd-ad8b-0800200c9a66/v12 ef:flow/e2fa688c-6555-11dd-ad8b-0800200c9a66/v13
ef:activity/change/20260822T0600486828500000/265481 cas_match_labels ef:agent/consensus_match ef:flow/e2fa688c-6555-11dd-ad8b-0800200c9a66/v13 ef:flow/e2fa688c-6555-11dd-ad8b-0800200c9a66/v14
ef:activity/change/20260822T0600486828500000/279724 properties ef:agent/opsin_iupac ef:flow/e2fa688c-6555-11dd-ad8b-0800200c9a66/v14 ef:flow/e2fa688c-6555-11dd-ad8b-0800200c9a66/v15
ef:activity/change/20260822T0600486828500000/286618 properties ef:agent/rdkit_post_consensus ef:flow/e2fa688c-6555-11dd-ad8b-0800200c9a66/v15 ef:flow/e2fa688c-6555-11dd-ad8b-0800200c9a66/v16
ef:activity/change/20260822T0600486828500000/291841 altLabel ef:agent/strip_catalogue_altlabels ef:flow/e2fa688c-6555-11dd-ad8b-0800200c9a66/v16 ef:flow/e2fa688c-6555-11dd-ad8b-0800200c9a66/v17
ef:activity/change/20260822T0600486828500000/373520 concept_associations ef:agent/carry_associations_onto_flows ef:flow/e2fa688c-6555-11dd-ad8b-0800200c9a66/v17 ef:flow/e2fa688c-6555-11dd-ad8b-0800200c9a66/v18
ef:activity/change/20260822T0600486828500000/394131 properties ef:agent/normalise_property_values ef:flow/e2fa688c-6555-11dd-ad8b-0800200c9a66/v18 ef:flow/e2fa688c-6555-11dd-ad8b-0800200c9a66/v19
ef:activity/change/20260822T0600486828500000/403656 types ef:agent/link_flows_to_their_substance ef:flow/e2fa688c-6555-11dd-ad8b-0800200c9a66/v19 ef:flow/e2fa688c-6555-11dd-ad8b-0800200c9a66/v20

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