Roxarsone
Everything that changed this flow. Back to the flow
e34bba41-2ccf-4866-b6b1-7c6d243c3c72
By field
14 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 3 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 2 catalogue altLabel value(s): 'NSC 2101' (registry code), 'NSC-2101' (registry code) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=roxarsone||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'121-19-7': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-f9fd50248c3c3b16: {'121-19-7': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['121-19-7']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_35817']; candidate_pubchem_cids=[5104, 2736478]; selected_pubchem_cids=[5104]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| roles | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
21| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 11,009 | bootstrap_labels | prefLabel | — | [{"@value":"roxarsone","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"brig… | Bootstrapped prefLabel from legacy name field |
| 11,010 | bootstrap_labels | name | roxarsone | — | Purged legacy name field to enforce prefLabel usage |
| 11,011 | bootstrap_labels | synonyms | ["organic","4-hydroxy-3-nitrobenzenearsonic","roxarsone"] | [] | Removed legacy synonyms field in favor of structured labels |
| 186,011 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Ground","geography":"Agricultural"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil |
| 186,012 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-grou-agri | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil |
| 216,993 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 223,666 | normalize_name_case | prefLabel | [{"@value":"roxarsone","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"brig… | [{"@value":"Roxarsone","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"brig… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 237,663 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H6AsNO6"… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 237,664 | enrich_references | skos_definition | — | [{"@value":"An organoarsonic acid where the organyl group is 4-hydroxy-3-nitrophenyl.","@language":"en","provenance":{"… | Merged ChEBI/PubChem definitions into skos:definition |
| 237,665 | enrich_references | references | [] | [{"@id":"gmelin:1221211","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"br… | Added references with provenance; cas_numbers=['121-19-7']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_35817']; candidate_pubchem_cids=[5104, 2736478]; selected_pubchem_cids=[5104]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 251,333 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H6AsNO6"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H6AsNO6"… | rdkit_pre_consensus from 'C1=CC(=C(C=C1[As](=O)(O)O)[N+](=O)[O-])O'; added: monoisotopic_mass |
| 255,933 | chebi_altlabels | altLabel | [] | [{"@value":"(4-hydroxy-3-nitrophenyl)arsonic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","… | Added 11 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 271,515 | consensus_match | altLabel | [{"@value":"(4-hydroxy-3-nitrophenyl)arsonic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","… | [{"@value":"(4-hydroxy-3-nitrophenyl)arsonic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","… | group_key=roxarsone||dimension=Environmental > media=Air > strata=Aircraft cruise height; cas=121-19-7; added Common Chemistry CAS names as altLabel: 3-Nitro-10, 3-Nitro-20, 3-Nitro-4-hydroxyphenyl arsenic acid, 3-Nitro-50, 3-Nitro-80, <em>As</em>-(4-Hydroxy-3-nitrophenyl)arsonic acid, <em>p</em>-Hydroxy-<em>m</em>-nitrophenylarsonic acid, Aklomix-3, Arsonic acid, (4-hydroxy-3-nitrophenyl)-, Arsonic acid, <em>As</em>-(4-hydroxy-3-nitrophenyl)-, Benzenearsonic acid, 4-hydroxy-3-nitro-, MeSH ID: D012406, NSC 2101, Ristat; object_uuid=fo-f9fd50248c3c3b16 |
| 271,516 | consensus_match | cas_match_labels | — | {"121-19-7":"exactMatch"} | group_key=roxarsone||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'121-19-7': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-f9fd50248c3c3b16: {'121-19-7': 'exactMatch'} |
| 276,517 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H6AsNO6"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H6AsNO6"… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '(4-hydroxy-3-nitrophenyl)arsonic acid' |
| 283,128 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H6AsNO6"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H6AsNO6"… | rdkit_post_consensus from 'O=[N+]([O-])c1cc([As](=O)(O)O)ccc1O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 289,556 | strip_catalogue_altlabels | altLabel | [{"@value":"(4-hydroxy-3-nitrophenyl)arsonic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","… | [{"@value":"(4-hydroxy-3-nitrophenyl)arsonic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","… | Removed 2 catalogue altLabel value(s): 'NSC 2101' (registry code), 'NSC-2101' (registry code) |
| 374,064 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/e34bba41-2ccf-… | associations resolved on the elementary layer |
| 390,898 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H6AsNO6"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H6AsNO6"… | typed the way the ontology types it |
| 398,689 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
| 398,690 | link_flows_to_their_substance | roles | — | [{"@id":"http://purl.obolibrary.org/obo/CHEBI_33286","rdfs:label":"agrochemical","http://www.w3.org/2004/02/skos/core#d… | the substance's answer, copied onto its flow |
PROV-O trail
21 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20261019T0712047113160000/11009 | prefLabel | ef:agent/bootstrap_labels | ef:flow/e34bba41-2ccf-4866-b6b1-7c6d243c3c72/v0 | ef:flow/e34bba41-2ccf-4866-b6b1-7c6d243c3c72/v1 |
| ef:activity/change/20261019T0712047113160000/11010 | name | ef:agent/bootstrap_labels | ef:flow/e34bba41-2ccf-4866-b6b1-7c6d243c3c72/v1 | ef:flow/e34bba41-2ccf-4866-b6b1-7c6d243c3c72/v2 |
| ef:activity/change/20261019T0712047113160000/11011 | synonyms | ef:agent/bootstrap_labels | ef:flow/e34bba41-2ccf-4866-b6b1-7c6d243c3c72/v2 | ef:flow/e34bba41-2ccf-4866-b6b1-7c6d243c3c72/v3 |
| ef:activity/change/20261019T0712047113160000/186011 | context | ef:agent/default_context_mapping | ef:flow/e34bba41-2ccf-4866-b6b1-7c6d243c3c72/v3 | ef:flow/e34bba41-2ccf-4866-b6b1-7c6d243c3c72/v4 |
| ef:activity/change/20261019T0712047113160000/186012 | context_iri | ef:agent/default_context_mapping | ef:flow/e34bba41-2ccf-4866-b6b1-7c6d243c3c72/v4 | ef:flow/e34bba41-2ccf-4866-b6b1-7c6d243c3c72/v5 |
| ef:activity/change/20261019T0712047113160000/216993 | unit_iri | ef:agent/unit_normalization | ef:flow/e34bba41-2ccf-4866-b6b1-7c6d243c3c72/v5 | ef:flow/e34bba41-2ccf-4866-b6b1-7c6d243c3c72/v6 |
| ef:activity/change/20261019T0712047113160000/223666 | prefLabel | ef:agent/normalize_name_case | ef:flow/e34bba41-2ccf-4866-b6b1-7c6d243c3c72/v6 | ef:flow/e34bba41-2ccf-4866-b6b1-7c6d243c3c72/v7 |
| ef:activity/change/20261019T0712047113160000/237663 | properties | ef:agent/enrich_references | ef:flow/e34bba41-2ccf-4866-b6b1-7c6d243c3c72/v7 | ef:flow/e34bba41-2ccf-4866-b6b1-7c6d243c3c72/v8 |
| ef:activity/change/20261019T0712047113160000/237664 | skos_definition | ef:agent/enrich_references | ef:flow/e34bba41-2ccf-4866-b6b1-7c6d243c3c72/v8 | ef:flow/e34bba41-2ccf-4866-b6b1-7c6d243c3c72/v9 |
| ef:activity/change/20261019T0712047113160000/237665 | references | ef:agent/enrich_references | ef:flow/e34bba41-2ccf-4866-b6b1-7c6d243c3c72/v9 | ef:flow/e34bba41-2ccf-4866-b6b1-7c6d243c3c72/v10 |
| ef:activity/change/20261019T0712047113160000/251333 | properties | ef:agent/rdkit_pre_consensus | ef:flow/e34bba41-2ccf-4866-b6b1-7c6d243c3c72/v10 | ef:flow/e34bba41-2ccf-4866-b6b1-7c6d243c3c72/v11 |
| ef:activity/change/20261019T0712047113160000/255933 | altLabel | ef:agent/chebi_altlabels | ef:flow/e34bba41-2ccf-4866-b6b1-7c6d243c3c72/v11 | ef:flow/e34bba41-2ccf-4866-b6b1-7c6d243c3c72/v12 |
| ef:activity/change/20261019T0712047113160000/271515 | altLabel | ef:agent/consensus_match | ef:flow/e34bba41-2ccf-4866-b6b1-7c6d243c3c72/v12 | ef:flow/e34bba41-2ccf-4866-b6b1-7c6d243c3c72/v13 |
| ef:activity/change/20261019T0712047113160000/271516 | cas_match_labels | ef:agent/consensus_match | ef:flow/e34bba41-2ccf-4866-b6b1-7c6d243c3c72/v13 | ef:flow/e34bba41-2ccf-4866-b6b1-7c6d243c3c72/v14 |
| ef:activity/change/20261019T0712047113160000/276517 | properties | ef:agent/opsin_iupac | ef:flow/e34bba41-2ccf-4866-b6b1-7c6d243c3c72/v14 | ef:flow/e34bba41-2ccf-4866-b6b1-7c6d243c3c72/v15 |
| ef:activity/change/20261019T0712047113160000/283128 | properties | ef:agent/rdkit_post_consensus | ef:flow/e34bba41-2ccf-4866-b6b1-7c6d243c3c72/v15 | ef:flow/e34bba41-2ccf-4866-b6b1-7c6d243c3c72/v16 |
| ef:activity/change/20261019T0712047113160000/289556 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/e34bba41-2ccf-4866-b6b1-7c6d243c3c72/v16 | ef:flow/e34bba41-2ccf-4866-b6b1-7c6d243c3c72/v17 |
| ef:activity/change/20261019T0712047113160000/374064 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/e34bba41-2ccf-4866-b6b1-7c6d243c3c72/v17 | ef:flow/e34bba41-2ccf-4866-b6b1-7c6d243c3c72/v18 |
| ef:activity/change/20261019T0712047113160000/390898 | properties | ef:agent/normalise_property_values | ef:flow/e34bba41-2ccf-4866-b6b1-7c6d243c3c72/v18 | ef:flow/e34bba41-2ccf-4866-b6b1-7c6d243c3c72/v19 |
| ef:activity/change/20261019T0712047113160000/398689 | types | ef:agent/link_flows_to_their_substance | ef:flow/e34bba41-2ccf-4866-b6b1-7c6d243c3c72/v19 | ef:flow/e34bba41-2ccf-4866-b6b1-7c6d243c3c72/v20 |
| ef:activity/change/20261019T0712047113160000/398690 | roles | ef:agent/link_flows_to_their_substance | ef:flow/e34bba41-2ccf-4866-b6b1-7c6d243c3c72/v20 | ef:flow/e34bba41-2ccf-4866-b6b1-7c6d243c3c72/v21 |