Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 2 catalogue altLabel value(s): 'NSC 113960' (registry code), 'NSC 9583' (registry code)
cas_match_labels 1 consensus_match group_key=1,4-naphthoquinone||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'130-15-4': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-a886359bce288e4b: {'130-15-4': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
prefLabel 1 bootstrap_labels Bootstrapped prefLabel from legacy name field
references 1 enrich_references Added references with provenance; cas_numbers=['130-15-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_27418']; candidate_pubchem_cids=[8530, 188840]; selected_pubchem_cids=[8530]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

19
# Step Field From To Why
20,811 bootstrap_labels prefLabel [{"@value":"1,4-naphthoquinone","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributed… Bootstrapped prefLabel from legacy name field
20,812 bootstrap_labels name 1,4-naphthoquinone Purged legacy name field to enforce prefLabel usage
20,813 bootstrap_labels synonyms [".alpha.-Naphthoquinone","1,4-Dihydro-1,4-diketonaphthalene","1,4-NAPHTHOQUINOLINE","1,4-Naftochinon","1,4-Naphthalene… [] Removed legacy synonyms field in favor of structured labels
186,456 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified
186,457 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified
220,059 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
246,348 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H6O2"],… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
246,349 enrich_references skos_definition [{"@value":"The parent structure of the family of 1,4-naphthoquinones, in which the oxo groups of the quinone moiety ar… Merged ChEBI/PubChem definitions into skos:definition
246,350 enrich_references references [] [{"@id":"gmelin:240850","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"con… Added references with provenance; cas_numbers=['130-15-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_27418']; candidate_pubchem_cids=[8530, 188840]; selected_pubchem_cids=[8530]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
253,847 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H6O2"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H6O2"],… rdkit_pre_consensus from 'C1=CC=C2C(=O)C=CC(=O)C2=C1'; added: monoisotopic_mass
257,034 chebi_altlabels altLabel [] [{"@value":"1,4-NQ","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensu… Added 8 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
258,712 consensus_match altLabel [{"@value":"1,4-NQ","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensu… [{"@value":"1,4-NQ","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensu… group_key=1,4-naphthoquinone||dimension=Environmental > media=Water > water_body=Ocean; cas=130-15-4; added Common Chemistry CAS names as altLabel: 1,4-Dihydronaphthalene-1,4-dione, 1,4-Naphthylquinone, NSC 113960, NSC 9583, Quino Power NQ, Quino Power NQI, α-Naphthoquinone; object_uuid=fo-a886359bce288e4b
258,713 consensus_match cas_match_labels {"130-15-4":"exactMatch"} group_key=1,4-naphthoquinone||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'130-15-4': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-a886359bce288e4b: {'130-15-4': 'exactMatch'}
279,047 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H6O2"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H6O2"],… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '1,4-naphthoquinone'
285,875 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H6O2"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H6O2"],… rdkit_post_consensus from 'O=C1C=CC(=O)c2ccccc21'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
291,377 strip_catalogue_altlabels altLabel [{"@value":"1,4-NQ","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensu… [{"@value":"1,4-NQ","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensu… Removed 2 catalogue altLabel value(s): 'NSC 113960' (registry code), 'NSC 9583' (registry code)
374,248 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/e417447a-e60f-… associations resolved on the elementary layer
393,424 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H6O2"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H6O2"],… typed the way the ontology types it
402,374 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

19 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T1812399309960000/20811 prefLabel ef:agent/bootstrap_labels ef:flow/e417447a-e60f-4fb4-a793-d64de2e5cb45/v0 ef:flow/e417447a-e60f-4fb4-a793-d64de2e5cb45/v1
ef:activity/change/20260820T1812399309960000/20812 name ef:agent/bootstrap_labels ef:flow/e417447a-e60f-4fb4-a793-d64de2e5cb45/v1 ef:flow/e417447a-e60f-4fb4-a793-d64de2e5cb45/v2
ef:activity/change/20260820T1812399309960000/20813 synonyms ef:agent/bootstrap_labels ef:flow/e417447a-e60f-4fb4-a793-d64de2e5cb45/v2 ef:flow/e417447a-e60f-4fb4-a793-d64de2e5cb45/v3
ef:activity/change/20260820T1812399309960000/186456 context ef:agent/default_context_mapping ef:flow/e417447a-e60f-4fb4-a793-d64de2e5cb45/v3 ef:flow/e417447a-e60f-4fb4-a793-d64de2e5cb45/v4
ef:activity/change/20260820T1812399309960000/186457 context_iri ef:agent/default_context_mapping ef:flow/e417447a-e60f-4fb4-a793-d64de2e5cb45/v4 ef:flow/e417447a-e60f-4fb4-a793-d64de2e5cb45/v5
ef:activity/change/20260820T1812399309960000/220059 unit_iri ef:agent/unit_normalization ef:flow/e417447a-e60f-4fb4-a793-d64de2e5cb45/v5 ef:flow/e417447a-e60f-4fb4-a793-d64de2e5cb45/v6
ef:activity/change/20260820T1812399309960000/246348 properties ef:agent/enrich_references ef:flow/e417447a-e60f-4fb4-a793-d64de2e5cb45/v6 ef:flow/e417447a-e60f-4fb4-a793-d64de2e5cb45/v7
ef:activity/change/20260820T1812399309960000/246349 skos_definition ef:agent/enrich_references ef:flow/e417447a-e60f-4fb4-a793-d64de2e5cb45/v7 ef:flow/e417447a-e60f-4fb4-a793-d64de2e5cb45/v8
ef:activity/change/20260820T1812399309960000/246350 references ef:agent/enrich_references ef:flow/e417447a-e60f-4fb4-a793-d64de2e5cb45/v8 ef:flow/e417447a-e60f-4fb4-a793-d64de2e5cb45/v9
ef:activity/change/20260820T1812399309960000/253847 properties ef:agent/rdkit_pre_consensus ef:flow/e417447a-e60f-4fb4-a793-d64de2e5cb45/v9 ef:flow/e417447a-e60f-4fb4-a793-d64de2e5cb45/v10
ef:activity/change/20260820T1812399309960000/257034 altLabel ef:agent/chebi_altlabels ef:flow/e417447a-e60f-4fb4-a793-d64de2e5cb45/v10 ef:flow/e417447a-e60f-4fb4-a793-d64de2e5cb45/v11
ef:activity/change/20260820T1812399309960000/258712 altLabel ef:agent/consensus_match ef:flow/e417447a-e60f-4fb4-a793-d64de2e5cb45/v11 ef:flow/e417447a-e60f-4fb4-a793-d64de2e5cb45/v12
ef:activity/change/20260820T1812399309960000/258713 cas_match_labels ef:agent/consensus_match ef:flow/e417447a-e60f-4fb4-a793-d64de2e5cb45/v12 ef:flow/e417447a-e60f-4fb4-a793-d64de2e5cb45/v13
ef:activity/change/20260820T1812399309960000/279047 properties ef:agent/opsin_iupac ef:flow/e417447a-e60f-4fb4-a793-d64de2e5cb45/v13 ef:flow/e417447a-e60f-4fb4-a793-d64de2e5cb45/v14
ef:activity/change/20260820T1812399309960000/285875 properties ef:agent/rdkit_post_consensus ef:flow/e417447a-e60f-4fb4-a793-d64de2e5cb45/v14 ef:flow/e417447a-e60f-4fb4-a793-d64de2e5cb45/v15
ef:activity/change/20260820T1812399309960000/291377 altLabel ef:agent/strip_catalogue_altlabels ef:flow/e417447a-e60f-4fb4-a793-d64de2e5cb45/v15 ef:flow/e417447a-e60f-4fb4-a793-d64de2e5cb45/v16
ef:activity/change/20260820T1812399309960000/374248 concept_associations ef:agent/carry_associations_onto_flows ef:flow/e417447a-e60f-4fb4-a793-d64de2e5cb45/v16 ef:flow/e417447a-e60f-4fb4-a793-d64de2e5cb45/v17
ef:activity/change/20260820T1812399309960000/393424 properties ef:agent/normalise_property_values ef:flow/e417447a-e60f-4fb4-a793-d64de2e5cb45/v17 ef:flow/e417447a-e60f-4fb4-a793-d64de2e5cb45/v18
ef:activity/change/20260820T1812399309960000/402374 types ef:agent/link_flows_to_their_substance ef:flow/e417447a-e60f-4fb4-a793-d64de2e5cb45/v18 ef:flow/e417447a-e60f-4fb4-a793-d64de2e5cb45/v19

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