Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 4 catalogue altLabel value(s): 'ABG 3034' (grade code), 'NSC 40818' (registry code), 'SD 4901' (grade code), 'SQ 4609' (grade code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=benzyl(purin-6-yl)amine||dimension=Environmental > media=Ground > geography=Non-agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'1214-39-7': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-7e648b7781a4eb78: {'1214-39-7': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term)
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term)
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['1214-39-7']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_29022']; candidate_pubchem_cids=[62389, 15986830, 17750983, 135747497]; selected_pubchem_cids=[62389]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
roles 1 link_flows_to_their_substance the substance's answer, copied onto its flow
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

21
# Step Field From To Why
22,197 bootstrap_labels prefLabel [{"@value":"benzyl(purin-6-yl)amine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttri… Bootstrapped prefLabel from legacy name field
22,198 bootstrap_labels name benzyl(purin-6-yl)amine Purged legacy name field to enforce prefLabel usage
22,199 bootstrap_labels synonyms ["((2r,3s,4r,5r)-5-(4-amino-2-oxopyrimidin-1(2h)-yl)-3,4-dihydroxytetrahydrofuran-2-yl)methyltriphosph","1H-PURIN-6-AMI… [] Removed legacy synonyms field in favor of structured labels
186,706 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Long-term"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term)
186,707 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-lote Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term)
220,418 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
226,104 normalize_name_case prefLabel [{"@value":"benzyl(purin-6-yl)amine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttri… [{"@value":"Benzyl(purin-6-yl)amine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttri… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
247,315 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H11N5"]… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
247,316 enrich_references skos_definition [{"@value":"A member of the class of 6-aminopurines that is adenine in which one of the hydrogens of the amino group is… Merged ChEBI/PubChem definitions into skos:definition
247,317 enrich_references references [] [{"@id":"bpdb:1324","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"consens… Added references with provenance; cas_numbers=['1214-39-7']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_29022']; candidate_pubchem_cids=[62389, 15986830, 17750983, 135747497]; selected_pubchem_cids=[62389]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
254,131 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H11N5"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H11N5"]… rdkit_pre_consensus from 'C1=CC=C(C=C1)CNC2=NC=NC3=C2NC=N3'; added: monoisotopic_mass
257,184 chebi_altlabels altLabel [] [{"@value":"6-(benzylamino)purine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribut… Added 12 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
264,220 consensus_match altLabel [{"@value":"6-(benzylamino)purine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribut… [{"@value":"6-(benzylamino)purine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribut… group_key=benzyl(purin-6-yl)amine||dimension=Environmental > media=Ground > geography=Non-agricultural; cas=1214-39-7; added Common Chemistry CAS names as altLabel: 1<em>H</em>-Purin-6-amine, <em>N</em>-(phenylmethyl)-, 6-(<em>N</em>-Benzylamino)purine, 6-BA, 6-Benzyladenine, 6-Benzylaminoadenine, 9<em>H</em>-Purin-6-amine, <em>N</em>-(phenylmethyl)-, <em>N</em>-(Phenylmethyl)-1<em>H</em>-purin-6-amine, <em>N</em>-(Phenylmethyl)-9<em>H</em>-purin-6-amine, <em>N</em><sup>6</sup>-(Benzylamino)purine, ABG 3034, Adenine, <em>N</em>-benzyl-, Adenine, <em>N</em><sup>6</sup>-benzyl-, BA, BA (growth stimulant), BAP (growth stimulant), Benzylaminopurine, Bongrow, CTP, CyLex, Cytokinin 6BA, MaxCel, N<sup>6</sup>-Benzylaminopurine, NSC 40818, Paturyl, Paturyl 10WSC, Pro-Shear, SD 4901, SQ 4609, TOG-L 101; object_uuid=fo-7e648b7781a4eb78
264,221 consensus_match cas_match_labels {"1214-39-7":"exactMatch"} group_key=benzyl(purin-6-yl)amine||dimension=Environmental > media=Ground > geography=Non-agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'1214-39-7': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-7e648b7781a4eb78: {'1214-39-7': 'exactMatch'}
279,346 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H11N5"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H11N5"]… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Benzyl(purin-6-yl)amine'
286,220 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H11N5"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H11N5"]… rdkit_post_consensus from 'c1ccc(CNc2ncnc3nc[nH]c23)cc1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
291,597 strip_catalogue_altlabels altLabel [{"@value":"6-(benzylamino)purine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribut… [{"@value":"6-(benzylamino)purine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribut… Removed 4 catalogue altLabel value(s): 'ABG 3034' (grade code), 'NSC 40818' (registry code), 'SD 4901' (grade code), 'SQ 4609' (grade code)
374,400 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/e48dfaf5-a61e-… associations resolved on the elementary layer
393,741 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H11N5"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H11N5"]… typed the way the ontology types it
402,891 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
402,892 link_flows_to_their_substance roles [{"@id":"http://purl.obolibrary.org/obo/CHEBI_26155","rdfs:label":"plant growth regulator","http://www.w3.org/2004/02/s… the substance's answer, copied onto its flow

PROV-O trail

21 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T0738569779880000/22197 prefLabel ef:agent/bootstrap_labels ef:flow/e48dfaf5-a61e-4051-b73e-165ceb30d165/v0 ef:flow/e48dfaf5-a61e-4051-b73e-165ceb30d165/v1
ef:activity/change/20260820T0738569779880000/22198 name ef:agent/bootstrap_labels ef:flow/e48dfaf5-a61e-4051-b73e-165ceb30d165/v1 ef:flow/e48dfaf5-a61e-4051-b73e-165ceb30d165/v2
ef:activity/change/20260820T0738569779880000/22199 synonyms ef:agent/bootstrap_labels ef:flow/e48dfaf5-a61e-4051-b73e-165ceb30d165/v2 ef:flow/e48dfaf5-a61e-4051-b73e-165ceb30d165/v3
ef:activity/change/20260820T0738569779880000/186706 context ef:agent/default_context_mapping ef:flow/e48dfaf5-a61e-4051-b73e-165ceb30d165/v3 ef:flow/e48dfaf5-a61e-4051-b73e-165ceb30d165/v4
ef:activity/change/20260820T0738569779880000/186707 context_iri ef:agent/default_context_mapping ef:flow/e48dfaf5-a61e-4051-b73e-165ceb30d165/v4 ef:flow/e48dfaf5-a61e-4051-b73e-165ceb30d165/v5
ef:activity/change/20260820T0738569779880000/220418 unit_iri ef:agent/unit_normalization ef:flow/e48dfaf5-a61e-4051-b73e-165ceb30d165/v5 ef:flow/e48dfaf5-a61e-4051-b73e-165ceb30d165/v6
ef:activity/change/20260820T0738569779880000/226104 prefLabel ef:agent/normalize_name_case ef:flow/e48dfaf5-a61e-4051-b73e-165ceb30d165/v6 ef:flow/e48dfaf5-a61e-4051-b73e-165ceb30d165/v7
ef:activity/change/20260820T0738569779880000/247315 properties ef:agent/enrich_references ef:flow/e48dfaf5-a61e-4051-b73e-165ceb30d165/v7 ef:flow/e48dfaf5-a61e-4051-b73e-165ceb30d165/v8
ef:activity/change/20260820T0738569779880000/247316 skos_definition ef:agent/enrich_references ef:flow/e48dfaf5-a61e-4051-b73e-165ceb30d165/v8 ef:flow/e48dfaf5-a61e-4051-b73e-165ceb30d165/v9
ef:activity/change/20260820T0738569779880000/247317 references ef:agent/enrich_references ef:flow/e48dfaf5-a61e-4051-b73e-165ceb30d165/v9 ef:flow/e48dfaf5-a61e-4051-b73e-165ceb30d165/v10
ef:activity/change/20260820T0738569779880000/254131 properties ef:agent/rdkit_pre_consensus ef:flow/e48dfaf5-a61e-4051-b73e-165ceb30d165/v10 ef:flow/e48dfaf5-a61e-4051-b73e-165ceb30d165/v11
ef:activity/change/20260820T0738569779880000/257184 altLabel ef:agent/chebi_altlabels ef:flow/e48dfaf5-a61e-4051-b73e-165ceb30d165/v11 ef:flow/e48dfaf5-a61e-4051-b73e-165ceb30d165/v12
ef:activity/change/20260820T0738569779880000/264220 altLabel ef:agent/consensus_match ef:flow/e48dfaf5-a61e-4051-b73e-165ceb30d165/v12 ef:flow/e48dfaf5-a61e-4051-b73e-165ceb30d165/v13
ef:activity/change/20260820T0738569779880000/264221 cas_match_labels ef:agent/consensus_match ef:flow/e48dfaf5-a61e-4051-b73e-165ceb30d165/v13 ef:flow/e48dfaf5-a61e-4051-b73e-165ceb30d165/v14
ef:activity/change/20260820T0738569779880000/279346 properties ef:agent/opsin_iupac ef:flow/e48dfaf5-a61e-4051-b73e-165ceb30d165/v14 ef:flow/e48dfaf5-a61e-4051-b73e-165ceb30d165/v15
ef:activity/change/20260820T0738569779880000/286220 properties ef:agent/rdkit_post_consensus ef:flow/e48dfaf5-a61e-4051-b73e-165ceb30d165/v15 ef:flow/e48dfaf5-a61e-4051-b73e-165ceb30d165/v16
ef:activity/change/20260820T0738569779880000/291597 altLabel ef:agent/strip_catalogue_altlabels ef:flow/e48dfaf5-a61e-4051-b73e-165ceb30d165/v16 ef:flow/e48dfaf5-a61e-4051-b73e-165ceb30d165/v17
ef:activity/change/20260820T0738569779880000/374400 concept_associations ef:agent/carry_associations_onto_flows ef:flow/e48dfaf5-a61e-4051-b73e-165ceb30d165/v17 ef:flow/e48dfaf5-a61e-4051-b73e-165ceb30d165/v18
ef:activity/change/20260820T0738569779880000/393741 properties ef:agent/normalise_property_values ef:flow/e48dfaf5-a61e-4051-b73e-165ceb30d165/v18 ef:flow/e48dfaf5-a61e-4051-b73e-165ceb30d165/v19
ef:activity/change/20260820T0738569779880000/402891 types ef:agent/link_flows_to_their_substance ef:flow/e48dfaf5-a61e-4051-b73e-165ceb30d165/v19 ef:flow/e48dfaf5-a61e-4051-b73e-165ceb30d165/v20
ef:activity/change/20260820T0738569779880000/402892 roles ef:agent/link_flows_to_their_substance ef:flow/e48dfaf5-a61e-4051-b73e-165ceb30d165/v20 ef:flow/e48dfaf5-a61e-4051-b73e-165ceb30d165/v21

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