Sodium Periodate
Everything that changed this flow. Back to the flow
eb10e6b4-bb29-44ac-9eb8-b717a0fbe11e
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 6 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus, withhold_ambiguous_mass | typed the way the ontology types it |
| altLabel | 3 | chebi_altlabels, consensus_match, dedupe_altlabels | Deduplicated altLabel values and removed entries matching prefLabel |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=sodiumperiodate||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'7790-28-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-9d75ba07afcb2b0d: {'7790-28-5': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['7790-28-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_75226']; candidate_pubchem_cids=[23667635, 45051826]; selected_pubchem_cids=[23667635]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
21| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 16,920 | bootstrap_labels | prefLabel | — | [{"@value":"sodium periodate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo… | Bootstrapped prefLabel from legacy name field |
| 16,921 | bootstrap_labels | name | sodium periodate | — | Purged legacy name field to enforce prefLabel usage |
| 16,922 | bootstrap_labels | synonyms | ["inorganic","sodiumperiodate","sodiummetaperiodate"] | [] | Removed legacy synonyms field in favor of structured labels |
| 190,406 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Ground level","population_density":"Urban (>1000 people/square mil… | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| 190,407 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-grle-ur10pesq | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| 218,889 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 224,963 | normalize_name_case | prefLabel | [{"@value":"sodium periodate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo… | [{"@value":"Sodium Periodate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 243,076 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["INaO4","IO… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 243,077 | enrich_references | skos_definition | — | [{"@value":"An inorganic sodium salt having periodate as the counterion.","@language":"en","provenance":{"prov:wasGener… | Merged ChEBI/PubChem definitions into skos:definition |
| 243,078 | enrich_references | references | [] | [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J44.039F","provenance":{"prov:wasGeneratedBy":"enrich_referenc… | Added references with provenance; cas_numbers=['7790-28-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_75226']; candidate_pubchem_cids=[23667635, 45051826]; selected_pubchem_cids=[23667635]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 252,896 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["INaO4","IO… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["INaO4","IO… | rdkit_pre_consensus from 'O=I(=O)(=O)[O-].[Na+]'; added: inchi2d_string, inchi2d_key_string, monoisotopic_mass |
| 256,615 | chebi_altlabels | altLabel | [] | [{"@value":"NaIO4","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus… | Added 4 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 272,009 | consensus_match | altLabel | [{"@value":"NaIO4","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus… | [{"@value":"NaIO4","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus… | group_key=sodiumperiodate||dimension=Environmental > media=Water > water_body=Ocean; cas=7790-28-5; added Common Chemistry CAS names as altLabel: Monosodium metaperiodate, Periodic acid (HIO<sub>4</sub>), sodium salt, Periodic acid (HIO<sub>4</sub>), sodium salt (1:1), Periodic acid sodium salt, Sodium metaperiodate (NaIO<sub>4</sub>), Sodium periodate (NaIO<sub>4</sub>); object_uuid=fo-9d75ba07afcb2b0d |
| 272,010 | consensus_match | cas_match_labels | — | {"7790-28-5":"exactMatch"} | group_key=sodiumperiodate||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'7790-28-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-9d75ba07afcb2b0d: {'7790-28-5': 'exactMatch'} |
| 278,100 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["INaO4","IO… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["INaO4","IO… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Sodium Periodate' |
| 284,835 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["INaO4","IO… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["INaO4","IO… | rdkit_post_consensus from '[Na+].[O-][I+3]([O-])([O-])[O-]'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 287,099 | withhold_ambiguous_mass | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["INaO4","IO… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["INaO4","IO… | withhold_ambiguous_mass: removed molecular_mass, monoisotopic_mass; the flow carries 2 candidate structures, so no one mass describes it |
| 292,904 | dedupe_altlabels | altLabel | [{"@value":"NaIO4","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus… | [{"@value":"NaIO4","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus… | Deduplicated altLabel values and removed entries matching prefLabel |
| 376,233 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/eb10e6b4-bb29-… | associations resolved on the elementary layer |
| 392,454 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["INaO4","IO… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["INaO4","IO… | typed the way the ontology types it |
| 400,935 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/ChemicalSalt"] | the substance's answer, copied onto its flow |
PROV-O trail
21 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260821T1302361922970000/16920 | prefLabel | ef:agent/bootstrap_labels | ef:flow/eb10e6b4-bb29-44ac-9eb8-b717a0fbe11e/v0 | ef:flow/eb10e6b4-bb29-44ac-9eb8-b717a0fbe11e/v1 |
| ef:activity/change/20260821T1302361922970000/16921 | name | ef:agent/bootstrap_labels | ef:flow/eb10e6b4-bb29-44ac-9eb8-b717a0fbe11e/v1 | ef:flow/eb10e6b4-bb29-44ac-9eb8-b717a0fbe11e/v2 |
| ef:activity/change/20260821T1302361922970000/16922 | synonyms | ef:agent/bootstrap_labels | ef:flow/eb10e6b4-bb29-44ac-9eb8-b717a0fbe11e/v2 | ef:flow/eb10e6b4-bb29-44ac-9eb8-b717a0fbe11e/v3 |
| ef:activity/change/20260821T1302361922970000/190406 | context | ef:agent/default_context_mapping | ef:flow/eb10e6b4-bb29-44ac-9eb8-b717a0fbe11e/v3 | ef:flow/eb10e6b4-bb29-44ac-9eb8-b717a0fbe11e/v4 |
| ef:activity/change/20260821T1302361922970000/190407 | context_iri | ef:agent/default_context_mapping | ef:flow/eb10e6b4-bb29-44ac-9eb8-b717a0fbe11e/v4 | ef:flow/eb10e6b4-bb29-44ac-9eb8-b717a0fbe11e/v5 |
| ef:activity/change/20260821T1302361922970000/218889 | unit_iri | ef:agent/unit_normalization | ef:flow/eb10e6b4-bb29-44ac-9eb8-b717a0fbe11e/v5 | ef:flow/eb10e6b4-bb29-44ac-9eb8-b717a0fbe11e/v6 |
| ef:activity/change/20260821T1302361922970000/224963 | prefLabel | ef:agent/normalize_name_case | ef:flow/eb10e6b4-bb29-44ac-9eb8-b717a0fbe11e/v6 | ef:flow/eb10e6b4-bb29-44ac-9eb8-b717a0fbe11e/v7 |
| ef:activity/change/20260821T1302361922970000/243076 | properties | ef:agent/enrich_references | ef:flow/eb10e6b4-bb29-44ac-9eb8-b717a0fbe11e/v7 | ef:flow/eb10e6b4-bb29-44ac-9eb8-b717a0fbe11e/v8 |
| ef:activity/change/20260821T1302361922970000/243077 | skos_definition | ef:agent/enrich_references | ef:flow/eb10e6b4-bb29-44ac-9eb8-b717a0fbe11e/v8 | ef:flow/eb10e6b4-bb29-44ac-9eb8-b717a0fbe11e/v9 |
| ef:activity/change/20260821T1302361922970000/243078 | references | ef:agent/enrich_references | ef:flow/eb10e6b4-bb29-44ac-9eb8-b717a0fbe11e/v9 | ef:flow/eb10e6b4-bb29-44ac-9eb8-b717a0fbe11e/v10 |
| ef:activity/change/20260821T1302361922970000/252896 | properties | ef:agent/rdkit_pre_consensus | ef:flow/eb10e6b4-bb29-44ac-9eb8-b717a0fbe11e/v10 | ef:flow/eb10e6b4-bb29-44ac-9eb8-b717a0fbe11e/v11 |
| ef:activity/change/20260821T1302361922970000/256615 | altLabel | ef:agent/chebi_altlabels | ef:flow/eb10e6b4-bb29-44ac-9eb8-b717a0fbe11e/v11 | ef:flow/eb10e6b4-bb29-44ac-9eb8-b717a0fbe11e/v12 |
| ef:activity/change/20260821T1302361922970000/272009 | altLabel | ef:agent/consensus_match | ef:flow/eb10e6b4-bb29-44ac-9eb8-b717a0fbe11e/v12 | ef:flow/eb10e6b4-bb29-44ac-9eb8-b717a0fbe11e/v13 |
| ef:activity/change/20260821T1302361922970000/272010 | cas_match_labels | ef:agent/consensus_match | ef:flow/eb10e6b4-bb29-44ac-9eb8-b717a0fbe11e/v13 | ef:flow/eb10e6b4-bb29-44ac-9eb8-b717a0fbe11e/v14 |
| ef:activity/change/20260821T1302361922970000/278100 | properties | ef:agent/opsin_iupac | ef:flow/eb10e6b4-bb29-44ac-9eb8-b717a0fbe11e/v14 | ef:flow/eb10e6b4-bb29-44ac-9eb8-b717a0fbe11e/v15 |
| ef:activity/change/20260821T1302361922970000/284835 | properties | ef:agent/rdkit_post_consensus | ef:flow/eb10e6b4-bb29-44ac-9eb8-b717a0fbe11e/v15 | ef:flow/eb10e6b4-bb29-44ac-9eb8-b717a0fbe11e/v16 |
| ef:activity/change/20260821T1302361922970000/287099 | properties | ef:agent/withhold_ambiguous_mass | ef:flow/eb10e6b4-bb29-44ac-9eb8-b717a0fbe11e/v16 | ef:flow/eb10e6b4-bb29-44ac-9eb8-b717a0fbe11e/v17 |
| ef:activity/change/20260821T1302361922970000/292904 | altLabel | ef:agent/dedupe_altlabels | ef:flow/eb10e6b4-bb29-44ac-9eb8-b717a0fbe11e/v17 | ef:flow/eb10e6b4-bb29-44ac-9eb8-b717a0fbe11e/v18 |
| ef:activity/change/20260821T1302361922970000/376233 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/eb10e6b4-bb29-44ac-9eb8-b717a0fbe11e/v18 | ef:flow/eb10e6b4-bb29-44ac-9eb8-b717a0fbe11e/v19 |
| ef:activity/change/20260821T1302361922970000/392454 | properties | ef:agent/normalise_property_values | ef:flow/eb10e6b4-bb29-44ac-9eb8-b717a0fbe11e/v19 | ef:flow/eb10e6b4-bb29-44ac-9eb8-b717a0fbe11e/v20 |
| ef:activity/change/20260821T1302361922970000/400935 | types | ef:agent/link_flows_to_their_substance | ef:flow/eb10e6b4-bb29-44ac-9eb8-b717a0fbe11e/v20 | ef:flow/eb10e6b4-bb29-44ac-9eb8-b717a0fbe11e/v21 |