Brightway Flows 1.0
GitHub

By field

13 fields
Field Changes Written by Latest note
properties 4 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, dedupe_altlabels Deduplicated altLabel values and removed entries matching prefLabel
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=decylamine||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'2016-57-1': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-0069f4a247bd9e11: {'2016-57-1': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['2016-57-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_166481']; candidate_pubchem_cids=[8916]; selected_pubchem_cids=[8916]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

19
# Step Field From To Why
20,706 bootstrap_labels prefLabel — [{"@value":"decylamine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"bri… Bootstrapped prefLabel from legacy name field
20,707 bootstrap_labels name decylamine — Purged legacy name field to enforce prefLabel usage
20,708 bootstrap_labels synonyms ["1-Aminodecane","1-Decanamine","1-Decaneamine","1-Decylamine","AC1L1RY4","AC1Q2W7N","Aminodecane","DECANE,1-AMINO","I0… [] Removed legacy synonyms field in favor of structured labels
194,317 default_context_mapping context — {"dimension":"Environmental","media":"Ground","geography":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
194,318 default_context_mapping context_iri — https://vocab.brightway.one/flow-contexts/envi-grou-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
220,032 unit_normalization unit_iri — https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
225,790 normalize_name_case prefLabel [{"@value":"decylamine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"bri… [{"@value":"Decylamine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"bri… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
246,266 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H23N"],… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
246,267 enrich_references skos_definition — [] Merged ChEBI/PubChem definitions into skos:definition
246,268 enrich_references references [] [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J7.849B","provenance":{"prov:wasGeneratedBy":"enrich_reference… Added references with provenance; cas_numbers=['2016-57-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_166481']; candidate_pubchem_cids=[8916]; selected_pubchem_cids=[8916]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
257,036 chebi_altlabels altLabel [] [{"@value":"decan-1-amine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"b… Added 1 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
265,591 consensus_match altLabel [{"@value":"decan-1-amine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"b… [{"@value":"decan-1-amine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"b… group_key=decylamine||dimension=Environmental > media=Air > strata=Unknown; cas=2016-57-1; added Common Chemistry CAS names as altLabel: 1-Aminodecane, 1-Decanamine, 1-Decylamine, <em>n</em>-Decylamine, Caprylamine, Decanamine, Fentamine A 10, Kemamine P 190D, Monodecylamine, NDA; object_uuid=fo-0069f4a247bd9e11
265,592 consensus_match cas_match_labels — {"2016-57-1":"exactMatch"} group_key=decylamine||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'2016-57-1': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-0069f4a247bd9e11: {'2016-57-1': 'exactMatch'}
279,033 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H23N"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H23N"],… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Decylamine'
285,860 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H23N"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H23N"],… rdkit_post_consensus from 'CCCCCCCCCCN'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
293,111 dedupe_altlabels altLabel [{"@value":"decan-1-amine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"b… [{"@value":"decan-1-amine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"b… Deduplicated altLabel values and removed entries matching prefLabel
378,222 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/f1ff44bc-01f1-… associations resolved on the elementary layer
393,439 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H23N"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H23N"],… typed the way the ontology types it
402,382 link_flows_to_their_substance types — ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

19 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20261019T0712047113160000/20706 prefLabel ef:agent/bootstrap_labels ef:flow/f1ff44bc-01f1-4c39-a175-c574f038f858/v0 ef:flow/f1ff44bc-01f1-4c39-a175-c574f038f858/v1
ef:activity/change/20261019T0712047113160000/20707 name ef:agent/bootstrap_labels ef:flow/f1ff44bc-01f1-4c39-a175-c574f038f858/v1 ef:flow/f1ff44bc-01f1-4c39-a175-c574f038f858/v2
ef:activity/change/20261019T0712047113160000/20708 synonyms ef:agent/bootstrap_labels ef:flow/f1ff44bc-01f1-4c39-a175-c574f038f858/v2 ef:flow/f1ff44bc-01f1-4c39-a175-c574f038f858/v3
ef:activity/change/20261019T0712047113160000/194317 context ef:agent/default_context_mapping ef:flow/f1ff44bc-01f1-4c39-a175-c574f038f858/v3 ef:flow/f1ff44bc-01f1-4c39-a175-c574f038f858/v4
ef:activity/change/20261019T0712047113160000/194318 context_iri ef:agent/default_context_mapping ef:flow/f1ff44bc-01f1-4c39-a175-c574f038f858/v4 ef:flow/f1ff44bc-01f1-4c39-a175-c574f038f858/v5
ef:activity/change/20261019T0712047113160000/220032 unit_iri ef:agent/unit_normalization ef:flow/f1ff44bc-01f1-4c39-a175-c574f038f858/v5 ef:flow/f1ff44bc-01f1-4c39-a175-c574f038f858/v6
ef:activity/change/20261019T0712047113160000/225790 prefLabel ef:agent/normalize_name_case ef:flow/f1ff44bc-01f1-4c39-a175-c574f038f858/v6 ef:flow/f1ff44bc-01f1-4c39-a175-c574f038f858/v7
ef:activity/change/20261019T0712047113160000/246266 properties ef:agent/enrich_references ef:flow/f1ff44bc-01f1-4c39-a175-c574f038f858/v7 ef:flow/f1ff44bc-01f1-4c39-a175-c574f038f858/v8
ef:activity/change/20261019T0712047113160000/246267 skos_definition ef:agent/enrich_references ef:flow/f1ff44bc-01f1-4c39-a175-c574f038f858/v8 ef:flow/f1ff44bc-01f1-4c39-a175-c574f038f858/v9
ef:activity/change/20261019T0712047113160000/246268 references ef:agent/enrich_references ef:flow/f1ff44bc-01f1-4c39-a175-c574f038f858/v9 ef:flow/f1ff44bc-01f1-4c39-a175-c574f038f858/v10
ef:activity/change/20261019T0712047113160000/257036 altLabel ef:agent/chebi_altlabels ef:flow/f1ff44bc-01f1-4c39-a175-c574f038f858/v10 ef:flow/f1ff44bc-01f1-4c39-a175-c574f038f858/v11
ef:activity/change/20261019T0712047113160000/265591 altLabel ef:agent/consensus_match ef:flow/f1ff44bc-01f1-4c39-a175-c574f038f858/v11 ef:flow/f1ff44bc-01f1-4c39-a175-c574f038f858/v12
ef:activity/change/20261019T0712047113160000/265592 cas_match_labels ef:agent/consensus_match ef:flow/f1ff44bc-01f1-4c39-a175-c574f038f858/v12 ef:flow/f1ff44bc-01f1-4c39-a175-c574f038f858/v13
ef:activity/change/20261019T0712047113160000/279033 properties ef:agent/opsin_iupac ef:flow/f1ff44bc-01f1-4c39-a175-c574f038f858/v13 ef:flow/f1ff44bc-01f1-4c39-a175-c574f038f858/v14
ef:activity/change/20261019T0712047113160000/285860 properties ef:agent/rdkit_post_consensus ef:flow/f1ff44bc-01f1-4c39-a175-c574f038f858/v14 ef:flow/f1ff44bc-01f1-4c39-a175-c574f038f858/v15
ef:activity/change/20261019T0712047113160000/293111 altLabel ef:agent/dedupe_altlabels ef:flow/f1ff44bc-01f1-4c39-a175-c574f038f858/v15 ef:flow/f1ff44bc-01f1-4c39-a175-c574f038f858/v16
ef:activity/change/20261019T0712047113160000/378222 concept_associations ef:agent/carry_associations_onto_flows ef:flow/f1ff44bc-01f1-4c39-a175-c574f038f858/v16 ef:flow/f1ff44bc-01f1-4c39-a175-c574f038f858/v17
ef:activity/change/20261019T0712047113160000/393439 properties ef:agent/normalise_property_values ef:flow/f1ff44bc-01f1-4c39-a175-c574f038f858/v17 ef:flow/f1ff44bc-01f1-4c39-a175-c574f038f858/v18
ef:activity/change/20261019T0712047113160000/402382 types ef:agent/link_flows_to_their_substance ef:flow/f1ff44bc-01f1-4c39-a175-c574f038f858/v18 ef:flow/f1ff44bc-01f1-4c39-a175-c574f038f858/v19

Keyboard

?
Show or hide this map
/
Focus search
Esc
Close