Consensus flow list

By field

15 fields
Field Changes Written by Latest note
properties 6 enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus the substance's answer, copied onto its flow
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 1 catalogue altLabel value(s): 'DE 535' (grade code)
cas_match_labels 1 consensus_match group_key=haloxyfop-(r)methylester||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['chebi', 'pubchem']; cas_sources={'72619-32-0': ['chebi', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-032d6646c58b84e2: {'72619-32-0': 'exactMatch'}
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
dcterms_is_replaced_by 1 pipeline.deduplication duplicate of d275c4a2-4977-49e4-9483-a1352a30ad60
is_replaced_by_uuid 1 pipeline.deduplication duplicate of d275c4a2-4977-49e4-9483-a1352a30ad60
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
owl_deprecated 1 pipeline.deduplication duplicate of d275c4a2-4977-49e4-9483-a1352a30ad60
prefLabel 1 bootstrap_labels Bootstrapped prefLabel from legacy name field
references 1 enrich_references Added references with provenance; cas_numbers=['72619-32-0']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_136729']; candidate_pubchem_cids=[50896, 13363033]; selected_pubchem_cids=[13363033]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
roles 1 link_flows_to_their_substance the substance's answer, copied onto its flow
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

22
# Step Field From To Why
25,681 bootstrap_labels prefLabel [{"@value":"Haloxyfop- (R) Methylester","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAt… Bootstrapped prefLabel from legacy name field
25,682 bootstrap_labels name Haloxyfop- (R) Methylester Purged legacy name field to enforce prefLabel usage
174,450 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Agricultural"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
174,451 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-agri Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
213,473 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
227,553 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C16H13ClF3… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
227,554 enrich_references skos_definition [{"@value":"A methyl 2-(4-{[3-chloro-5-(trifluoromethyl)pyridin-2-yl]oxy}phenoxy)propanoate that has R configuration. I… Merged ChEBI/PubChem definitions into skos:definition
227,555 enrich_references references [] [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J671.317C","provenance":{"prov:wasGeneratedBy":"enrich_referen… Added references with provenance; cas_numbers=['72619-32-0']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_136729']; candidate_pubchem_cids=[50896, 13363033]; selected_pubchem_cids=[13363033]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
248,424 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C16H13ClF3… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C16H13ClF3… rdkit_pre_consensus from 'CC(C(=O)OC)OC1=CC=C(C=C1)OC2=C(C=C(C=N2)C(F)(F)F)Cl'; added: inchi2d_string
254,434 chebi_altlabels altLabel [] [{"@value":"(R)-haloxyfop methyl ester","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAtt… Added 7 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
267,521 consensus_match altLabel [{"@value":"(R)-haloxyfop methyl ester","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAtt… [{"@value":"(R)-haloxyfop methyl ester","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAtt… group_key=haloxyfop-(r)methylester||dimension=Environmental > media=Water > water_body=Ocean; cas=72619-32-0; added Common Chemistry CAS names as altLabel: (<em>R</em>)-Haloxyfop-methyl, DE 535, Edge, Eloge, Haloxyfop-<em>P</em>-methyl, Haloxyfop-P methyl ester, Propanoic acid, 2-[4-[[3-chloro-5-(trifluoromethyl)-2-pyridinyl]oxy]phenoxy]-, methyl ester, (2<em>R</em>)-, Propanoic acid, 2-[4-[[3-chloro-5-(trifluoromethyl)-2-pyridinyl]oxy]phenoxy]-, methyl ester, (<em>R</em>)-, Zellek Super; object_uuid=fo-032d6646c58b84e2
267,522 consensus_match cas_match_labels {"72619-32-0":"exactMatch"} group_key=haloxyfop-(r)methylester||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['chebi', 'pubchem']; cas_sources={'72619-32-0': ['chebi', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-032d6646c58b84e2: {'72619-32-0': 'exactMatch'}
279,755 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C16H13ClF3… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C16H13ClF3… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'methyl (2R)-2-(4-{[3-chloro-5-(trifluoromethyl)pyridin-2-yl]oxy}phenoxy)propanoate'
286,652 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C16H13ClF3… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C16H13ClF3… rdkit_post_consensus from 'COC(=O)[C@@H](C)Oc1ccc(Oc2ncc(C(F)(F)F)cc2Cl)cc1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
287,349 strip_catalogue_altlabels altLabel [{"@value":"(R)-haloxyfop methyl ester","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAtt… [{"@value":"(R)-haloxyfop methyl ester","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAtt… Removed 1 catalogue altLabel value(s): 'DE 535' (grade code)
293,971 pipeline.deduplication owl_deprecated yes duplicate of d275c4a2-4977-49e4-9483-a1352a30ad60
293,972 pipeline.deduplication dcterms_is_replaced_by urn:uuid:d275c4a2-4977-49e4-9483-a1352a30ad60 duplicate of d275c4a2-4977-49e4-9483-a1352a30ad60
293,973 pipeline.deduplication is_replaced_by_uuid d275c4a2-4977-49e4-9483-a1352a30ad60 duplicate of d275c4a2-4977-49e4-9483-a1352a30ad60
394,166 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C16H13ClF3… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C16H13ClF3… typed the way the ontology types it
394,341 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
394,342 link_flows_to_their_substance roles [{"@id":"http://purl.obolibrary.org/obo/CHEBI_33286","rdfs:label":"agrochemical","http://www.w3.org/2004/02/skos/core#d… the substance's answer, copied onto its flow
403,720 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C16H13ClF3… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C16H13ClF3… the substance's answer, copied onto its flow

PROV-O trail

22 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T0738569779880000/25681 prefLabel ef:agent/bootstrap_labels ef:flow/f20d5f26-c097-4d93-a72c-dcc76f462977/v0 ef:flow/f20d5f26-c097-4d93-a72c-dcc76f462977/v1
ef:activity/change/20260820T0738569779880000/25682 name ef:agent/bootstrap_labels ef:flow/f20d5f26-c097-4d93-a72c-dcc76f462977/v1 ef:flow/f20d5f26-c097-4d93-a72c-dcc76f462977/v2
ef:activity/change/20260820T0738569779880000/174450 context ef:agent/default_context_mapping ef:flow/f20d5f26-c097-4d93-a72c-dcc76f462977/v2 ef:flow/f20d5f26-c097-4d93-a72c-dcc76f462977/v3
ef:activity/change/20260820T0738569779880000/174451 context_iri ef:agent/default_context_mapping ef:flow/f20d5f26-c097-4d93-a72c-dcc76f462977/v3 ef:flow/f20d5f26-c097-4d93-a72c-dcc76f462977/v4
ef:activity/change/20260820T0738569779880000/213473 unit_iri ef:agent/unit_normalization ef:flow/f20d5f26-c097-4d93-a72c-dcc76f462977/v4 ef:flow/f20d5f26-c097-4d93-a72c-dcc76f462977/v5
ef:activity/change/20260820T0738569779880000/227553 properties ef:agent/enrich_references ef:flow/f20d5f26-c097-4d93-a72c-dcc76f462977/v5 ef:flow/f20d5f26-c097-4d93-a72c-dcc76f462977/v6
ef:activity/change/20260820T0738569779880000/227554 skos_definition ef:agent/enrich_references ef:flow/f20d5f26-c097-4d93-a72c-dcc76f462977/v6 ef:flow/f20d5f26-c097-4d93-a72c-dcc76f462977/v7
ef:activity/change/20260820T0738569779880000/227555 references ef:agent/enrich_references ef:flow/f20d5f26-c097-4d93-a72c-dcc76f462977/v7 ef:flow/f20d5f26-c097-4d93-a72c-dcc76f462977/v8
ef:activity/change/20260820T0738569779880000/248424 properties ef:agent/rdkit_pre_consensus ef:flow/f20d5f26-c097-4d93-a72c-dcc76f462977/v8 ef:flow/f20d5f26-c097-4d93-a72c-dcc76f462977/v9
ef:activity/change/20260820T0738569779880000/254434 altLabel ef:agent/chebi_altlabels ef:flow/f20d5f26-c097-4d93-a72c-dcc76f462977/v9 ef:flow/f20d5f26-c097-4d93-a72c-dcc76f462977/v10
ef:activity/change/20260820T0738569779880000/267521 altLabel ef:agent/consensus_match ef:flow/f20d5f26-c097-4d93-a72c-dcc76f462977/v10 ef:flow/f20d5f26-c097-4d93-a72c-dcc76f462977/v11
ef:activity/change/20260820T0738569779880000/267522 cas_match_labels ef:agent/consensus_match ef:flow/f20d5f26-c097-4d93-a72c-dcc76f462977/v11 ef:flow/f20d5f26-c097-4d93-a72c-dcc76f462977/v12
ef:activity/change/20260820T0738569779880000/279755 properties ef:agent/opsin_iupac ef:flow/f20d5f26-c097-4d93-a72c-dcc76f462977/v12 ef:flow/f20d5f26-c097-4d93-a72c-dcc76f462977/v13
ef:activity/change/20260820T0738569779880000/286652 properties ef:agent/rdkit_post_consensus ef:flow/f20d5f26-c097-4d93-a72c-dcc76f462977/v13 ef:flow/f20d5f26-c097-4d93-a72c-dcc76f462977/v14
ef:activity/change/20260820T0738569779880000/287349 altLabel ef:agent/strip_catalogue_altlabels ef:flow/f20d5f26-c097-4d93-a72c-dcc76f462977/v14 ef:flow/f20d5f26-c097-4d93-a72c-dcc76f462977/v15
ef:activity/change/20260820T0738569779880000/293971 owl_deprecated ef:agent/pipeline.deduplication ef:flow/f20d5f26-c097-4d93-a72c-dcc76f462977/v15 ef:flow/f20d5f26-c097-4d93-a72c-dcc76f462977/v16
ef:activity/change/20260820T0738569779880000/293972 dcterms_is_replaced_by ef:agent/pipeline.deduplication ef:flow/f20d5f26-c097-4d93-a72c-dcc76f462977/v16 ef:flow/f20d5f26-c097-4d93-a72c-dcc76f462977/v17
ef:activity/change/20260820T0738569779880000/293973 is_replaced_by_uuid ef:agent/pipeline.deduplication ef:flow/f20d5f26-c097-4d93-a72c-dcc76f462977/v17 ef:flow/f20d5f26-c097-4d93-a72c-dcc76f462977/v18
ef:activity/change/20260820T0738569779880000/394166 properties ef:agent/normalise_property_values ef:flow/f20d5f26-c097-4d93-a72c-dcc76f462977/v18 ef:flow/f20d5f26-c097-4d93-a72c-dcc76f462977/v19
ef:activity/change/20260820T0738569779880000/394341 types ef:agent/link_flows_to_their_substance ef:flow/f20d5f26-c097-4d93-a72c-dcc76f462977/v19 ef:flow/f20d5f26-c097-4d93-a72c-dcc76f462977/v20
ef:activity/change/20260820T0738569779880000/394342 roles ef:agent/link_flows_to_their_substance ef:flow/f20d5f26-c097-4d93-a72c-dcc76f462977/v20 ef:flow/f20d5f26-c097-4d93-a72c-dcc76f462977/v21
ef:activity/change/20260820T0738569779880000/403720 properties ef:agent/link_flows_to_their_substance ef:flow/f20d5f26-c097-4d93-a72c-dcc76f462977/v21 ef:flow/f20d5f26-c097-4d93-a72c-dcc76f462977/v22

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