Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 1 catalogue altLabel value(s): 'NSC 3696' (registry code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=para-cresol||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'106-44-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-089e2148c9842028: {'106-44-5': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['106-44-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_17847']; candidate_pubchem_cids=[2879, 490350, 5284452]; selected_pubchem_cids=[2879]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
roles 1 link_flows_to_their_substance the substance's answer, copied onto its flow
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

21
# Step Field From To Why
22,530 bootstrap_labels prefLabel [{"@value":"para-cresol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"co… Bootstrapped prefLabel from legacy name field
22,531 bootstrap_labels name para-cresol Purged legacy name field to enforce prefLabel usage
22,532 bootstrap_labels synonyms ["1-Hydroxy-4-methylbenzene","1-Methyl-4-hydroxybenzene","4-Cresol","4-Hydroxytoluene","4-Methylphenol","4-methylphenol… [] Removed legacy synonyms field in favor of structured labels
194,496 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
194,497 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
220,489 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
226,166 normalize_name_case prefLabel [{"@value":"para-cresol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"co… [{"@value":"Para-cresol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"co… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
247,482 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H8O"],"a… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
247,483 enrich_references skos_definition [{"@value":"A cresol that consists of toluene substituted by a hydroxy group at position 4. It is a metabolite of aroma… Merged ChEBI/PubChem definitions into skos:definition
247,484 enrich_references references [] [{"@id":"gmelin:2779","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"conse… Added references with provenance; cas_numbers=['106-44-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_17847']; candidate_pubchem_cids=[2879, 490350, 5284452]; selected_pubchem_cids=[2879]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
254,179 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H8O"],"a… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H8O"],"a… rdkit_pre_consensus from 'CC1=CC=C(C=C1)O'; added: monoisotopic_mass
257,218 chebi_altlabels altLabel [] [{"@value":"1-hydroxy-4-methylbenzene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttr… Added 11 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
270,370 consensus_match altLabel [{"@value":"1-hydroxy-4-methylbenzene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttr… [{"@value":"1-hydroxy-4-methylbenzene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttr… group_key=para-cresol||dimension=Environmental > media=Air > strata=Unknown; cas=106-44-5; added Common Chemistry CAS names as altLabel: 1-Methyl-4-hydroxybenzene, <em>p</em>-Cresylic acid, <em>p</em>-Hydroxytoluene, <em>p</em>-Methylhydroxybenzene, <em>p</em>-Oxytoluene, <em>p</em>-Toluol, NSC 3696, Phenol, 4-methyl-; object_uuid=fo-089e2148c9842028
270,371 consensus_match cas_match_labels {"106-44-5":"exactMatch"} group_key=para-cresol||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'106-44-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-089e2148c9842028: {'106-44-5': 'exactMatch'}
279,404 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H8O"],"a… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H8O"],"a… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Para-cresol'
286,281 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H8O"],"a… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H8O"],"a… rdkit_post_consensus from 'Cc1ccc(O)cc1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
291,637 strip_catalogue_altlabels altLabel [{"@value":"1-hydroxy-4-methylbenzene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttr… [{"@value":"1-hydroxy-4-methylbenzene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttr… Removed 1 catalogue altLabel value(s): 'NSC 3696' (registry code)
378,300 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/f21438e9-6555-… associations resolved on the elementary layer
393,800 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H8O"],"a… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H8O"],"a… typed the way the ontology types it
402,985 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
402,986 link_flows_to_their_substance roles [{"@id":"http://purl.obolibrary.org/obo/CHEBI_24127","rdfs:label":"fungicide","http://www.w3.org/2004/02/skos/core#defi… the substance's answer, copied onto its flow

PROV-O trail

21 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T0738569779880000/22530 prefLabel ef:agent/bootstrap_labels ef:flow/f21438e9-6555-11dd-ad8b-0800200c9a66/v0 ef:flow/f21438e9-6555-11dd-ad8b-0800200c9a66/v1
ef:activity/change/20260820T0738569779880000/22531 name ef:agent/bootstrap_labels ef:flow/f21438e9-6555-11dd-ad8b-0800200c9a66/v1 ef:flow/f21438e9-6555-11dd-ad8b-0800200c9a66/v2
ef:activity/change/20260820T0738569779880000/22532 synonyms ef:agent/bootstrap_labels ef:flow/f21438e9-6555-11dd-ad8b-0800200c9a66/v2 ef:flow/f21438e9-6555-11dd-ad8b-0800200c9a66/v3
ef:activity/change/20260820T0738569779880000/194496 context ef:agent/default_context_mapping ef:flow/f21438e9-6555-11dd-ad8b-0800200c9a66/v3 ef:flow/f21438e9-6555-11dd-ad8b-0800200c9a66/v4
ef:activity/change/20260820T0738569779880000/194497 context_iri ef:agent/default_context_mapping ef:flow/f21438e9-6555-11dd-ad8b-0800200c9a66/v4 ef:flow/f21438e9-6555-11dd-ad8b-0800200c9a66/v5
ef:activity/change/20260820T0738569779880000/220489 unit_iri ef:agent/unit_normalization ef:flow/f21438e9-6555-11dd-ad8b-0800200c9a66/v5 ef:flow/f21438e9-6555-11dd-ad8b-0800200c9a66/v6
ef:activity/change/20260820T0738569779880000/226166 prefLabel ef:agent/normalize_name_case ef:flow/f21438e9-6555-11dd-ad8b-0800200c9a66/v6 ef:flow/f21438e9-6555-11dd-ad8b-0800200c9a66/v7
ef:activity/change/20260820T0738569779880000/247482 properties ef:agent/enrich_references ef:flow/f21438e9-6555-11dd-ad8b-0800200c9a66/v7 ef:flow/f21438e9-6555-11dd-ad8b-0800200c9a66/v8
ef:activity/change/20260820T0738569779880000/247483 skos_definition ef:agent/enrich_references ef:flow/f21438e9-6555-11dd-ad8b-0800200c9a66/v8 ef:flow/f21438e9-6555-11dd-ad8b-0800200c9a66/v9
ef:activity/change/20260820T0738569779880000/247484 references ef:agent/enrich_references ef:flow/f21438e9-6555-11dd-ad8b-0800200c9a66/v9 ef:flow/f21438e9-6555-11dd-ad8b-0800200c9a66/v10
ef:activity/change/20260820T0738569779880000/254179 properties ef:agent/rdkit_pre_consensus ef:flow/f21438e9-6555-11dd-ad8b-0800200c9a66/v10 ef:flow/f21438e9-6555-11dd-ad8b-0800200c9a66/v11
ef:activity/change/20260820T0738569779880000/257218 altLabel ef:agent/chebi_altlabels ef:flow/f21438e9-6555-11dd-ad8b-0800200c9a66/v11 ef:flow/f21438e9-6555-11dd-ad8b-0800200c9a66/v12
ef:activity/change/20260820T0738569779880000/270370 altLabel ef:agent/consensus_match ef:flow/f21438e9-6555-11dd-ad8b-0800200c9a66/v12 ef:flow/f21438e9-6555-11dd-ad8b-0800200c9a66/v13
ef:activity/change/20260820T0738569779880000/270371 cas_match_labels ef:agent/consensus_match ef:flow/f21438e9-6555-11dd-ad8b-0800200c9a66/v13 ef:flow/f21438e9-6555-11dd-ad8b-0800200c9a66/v14
ef:activity/change/20260820T0738569779880000/279404 properties ef:agent/opsin_iupac ef:flow/f21438e9-6555-11dd-ad8b-0800200c9a66/v14 ef:flow/f21438e9-6555-11dd-ad8b-0800200c9a66/v15
ef:activity/change/20260820T0738569779880000/286281 properties ef:agent/rdkit_post_consensus ef:flow/f21438e9-6555-11dd-ad8b-0800200c9a66/v15 ef:flow/f21438e9-6555-11dd-ad8b-0800200c9a66/v16
ef:activity/change/20260820T0738569779880000/291637 altLabel ef:agent/strip_catalogue_altlabels ef:flow/f21438e9-6555-11dd-ad8b-0800200c9a66/v16 ef:flow/f21438e9-6555-11dd-ad8b-0800200c9a66/v17
ef:activity/change/20260820T0738569779880000/378300 concept_associations ef:agent/carry_associations_onto_flows ef:flow/f21438e9-6555-11dd-ad8b-0800200c9a66/v17 ef:flow/f21438e9-6555-11dd-ad8b-0800200c9a66/v18
ef:activity/change/20260820T0738569779880000/393800 properties ef:agent/normalise_property_values ef:flow/f21438e9-6555-11dd-ad8b-0800200c9a66/v18 ef:flow/f21438e9-6555-11dd-ad8b-0800200c9a66/v19
ef:activity/change/20260820T0738569779880000/402985 types ef:agent/link_flows_to_their_substance ef:flow/f21438e9-6555-11dd-ad8b-0800200c9a66/v19 ef:flow/f21438e9-6555-11dd-ad8b-0800200c9a66/v20
ef:activity/change/20260820T0738569779880000/402986 roles ef:agent/link_flows_to_their_substance ef:flow/f21438e9-6555-11dd-ad8b-0800200c9a66/v20 ef:flow/f21438e9-6555-11dd-ad8b-0800200c9a66/v21

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