Glyoxal
Everything that changed this flow. Back to the flow
f214600a-6555-11dd-ad8b-0800200c9a66
By field
14 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 3 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 3 catalogue altLabel value(s): 'Aurarez 136' (trade name), 'Permafresh 114' (trade name), 'XH 536' (grade code) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=glyoxal||dimension=Environmental > media=Air > indoor=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'107-22-2': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-ae6c77cde15cc487: {'107-22-2': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term) |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term) |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['107-22-2']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_34779']; candidate_pubchem_cids=[1030, 7860, 4139223, 10219968]; selected_pubchem_cids=[7860]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| roles | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
21| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 22,405 | bootstrap_labels | prefLabel | — | [{"@value":"glyoxal","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consen… | Bootstrapped prefLabel from legacy name field |
| 22,406 | bootstrap_labels | name | glyoxal | — | Purged legacy name field to enforce prefLabel usage |
| 25,697 | bootstrap_labels | synonyms | ["1,2-Ethanedione","AB1002215","AC1L1PPU","AC1Q28J9","AKOS000119169","Aerotex glyoxal 40","BB_SC-7204","Biformal","Bifo… | [] | Removed legacy synonyms field in favor of structured labels |
| 194,614 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Water","water_body":"Long-term"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term) |
| 194,615 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-wate-lote | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term) |
| 220,456 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 226,141 | normalize_name_case | prefLabel | [{"@value":"glyoxal","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consen… | [{"@value":"Glyoxal","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consen… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 247,405 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H2O2"],"… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 247,406 | enrich_references | skos_definition | — | [{"@value":"The dialdehyde that is the smallest possible and which consists of ethane having oxo groups on both carbons… | Merged ChEBI/PubChem definitions into skos:definition |
| 247,407 | enrich_references | references | [] | [{"@id":"foodb.food:FDB007802","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedT… | Added references with provenance; cas_numbers=['107-22-2']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_34779']; candidate_pubchem_cids=[1030, 7860, 4139223, 10219968]; selected_pubchem_cids=[7860]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 254,157 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H2O2"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H2O2"],"… | rdkit_pre_consensus from 'C(=O)C=O'; added: monoisotopic_mass |
| 257,199 | chebi_altlabels | altLabel | [] | [{"@value":"1,2-Ethanedione","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… | Added 12 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 267,472 | consensus_match | altLabel | [{"@value":"1,2-Ethanedione","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… | [{"@value":"1,2-Ethanedione","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… | group_key=glyoxal||dimension=Environmental > media=Air > indoor=Unknown; cas=107-22-2; added Common Chemistry CAS names as altLabel: Aurarez 136, Cartabond GH, Cartabond GHF, Daicel GY 60, Earth Works Linkup Plus, Ethanedione, Freechem 40DL, GX, GX (aldehyde), Glyfix CS 50, Glyoxal 40L, Glyoxal T 40, Glyoxazal, Glyoxazal GX, Gohsezal P, MeSH ID: D006037, Permafresh 114, Protorez BLF-C, XH 536; object_uuid=fo-ae6c77cde15cc487 |
| 267,473 | consensus_match | cas_match_labels | — | {"107-22-2":"exactMatch"} | group_key=glyoxal||dimension=Environmental > media=Air > indoor=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'107-22-2': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-ae6c77cde15cc487: {'107-22-2': 'exactMatch'} |
| 279,372 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H2O2"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H2O2"],"… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Glyoxal' |
| 286,249 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H2O2"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H2O2"],"… | rdkit_post_consensus from 'O=CC=O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 291,613 | strip_catalogue_altlabels | altLabel | [{"@value":"1,2-Ethanedione","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… | [{"@value":"1,2-Ethanedione","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… | Removed 3 catalogue altLabel value(s): 'Aurarez 136' (trade name), 'Permafresh 114' (trade name), 'XH 536' (grade code) |
| 378,359 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/f214600a-6555-… | associations resolved on the elementary layer |
| 393,768 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H2O2"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H2O2"],"… | typed the way the ontology types it |
| 402,938 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
| 402,939 | link_flows_to_their_substance | roles | — | [{"@id":"http://purl.obolibrary.org/obo/CHEBI_33286","rdfs:label":"agrochemical","http://www.w3.org/2004/02/skos/core#d… | the substance's answer, copied onto its flow |
PROV-O trail
21 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260820T0738569779880000/22405 | prefLabel | ef:agent/bootstrap_labels | ef:flow/f214600a-6555-11dd-ad8b-0800200c9a66/v0 | ef:flow/f214600a-6555-11dd-ad8b-0800200c9a66/v1 |
| ef:activity/change/20260820T0738569779880000/22406 | name | ef:agent/bootstrap_labels | ef:flow/f214600a-6555-11dd-ad8b-0800200c9a66/v1 | ef:flow/f214600a-6555-11dd-ad8b-0800200c9a66/v2 |
| ef:activity/change/20260820T0738569779880000/25697 | synonyms | ef:agent/bootstrap_labels | ef:flow/f214600a-6555-11dd-ad8b-0800200c9a66/v2 | ef:flow/f214600a-6555-11dd-ad8b-0800200c9a66/v3 |
| ef:activity/change/20260820T0738569779880000/194614 | context | ef:agent/default_context_mapping | ef:flow/f214600a-6555-11dd-ad8b-0800200c9a66/v3 | ef:flow/f214600a-6555-11dd-ad8b-0800200c9a66/v4 |
| ef:activity/change/20260820T0738569779880000/194615 | context_iri | ef:agent/default_context_mapping | ef:flow/f214600a-6555-11dd-ad8b-0800200c9a66/v4 | ef:flow/f214600a-6555-11dd-ad8b-0800200c9a66/v5 |
| ef:activity/change/20260820T0738569779880000/220456 | unit_iri | ef:agent/unit_normalization | ef:flow/f214600a-6555-11dd-ad8b-0800200c9a66/v5 | ef:flow/f214600a-6555-11dd-ad8b-0800200c9a66/v6 |
| ef:activity/change/20260820T0738569779880000/226141 | prefLabel | ef:agent/normalize_name_case | ef:flow/f214600a-6555-11dd-ad8b-0800200c9a66/v6 | ef:flow/f214600a-6555-11dd-ad8b-0800200c9a66/v7 |
| ef:activity/change/20260820T0738569779880000/247405 | properties | ef:agent/enrich_references | ef:flow/f214600a-6555-11dd-ad8b-0800200c9a66/v7 | ef:flow/f214600a-6555-11dd-ad8b-0800200c9a66/v8 |
| ef:activity/change/20260820T0738569779880000/247406 | skos_definition | ef:agent/enrich_references | ef:flow/f214600a-6555-11dd-ad8b-0800200c9a66/v8 | ef:flow/f214600a-6555-11dd-ad8b-0800200c9a66/v9 |
| ef:activity/change/20260820T0738569779880000/247407 | references | ef:agent/enrich_references | ef:flow/f214600a-6555-11dd-ad8b-0800200c9a66/v9 | ef:flow/f214600a-6555-11dd-ad8b-0800200c9a66/v10 |
| ef:activity/change/20260820T0738569779880000/254157 | properties | ef:agent/rdkit_pre_consensus | ef:flow/f214600a-6555-11dd-ad8b-0800200c9a66/v10 | ef:flow/f214600a-6555-11dd-ad8b-0800200c9a66/v11 |
| ef:activity/change/20260820T0738569779880000/257199 | altLabel | ef:agent/chebi_altlabels | ef:flow/f214600a-6555-11dd-ad8b-0800200c9a66/v11 | ef:flow/f214600a-6555-11dd-ad8b-0800200c9a66/v12 |
| ef:activity/change/20260820T0738569779880000/267472 | altLabel | ef:agent/consensus_match | ef:flow/f214600a-6555-11dd-ad8b-0800200c9a66/v12 | ef:flow/f214600a-6555-11dd-ad8b-0800200c9a66/v13 |
| ef:activity/change/20260820T0738569779880000/267473 | cas_match_labels | ef:agent/consensus_match | ef:flow/f214600a-6555-11dd-ad8b-0800200c9a66/v13 | ef:flow/f214600a-6555-11dd-ad8b-0800200c9a66/v14 |
| ef:activity/change/20260820T0738569779880000/279372 | properties | ef:agent/opsin_iupac | ef:flow/f214600a-6555-11dd-ad8b-0800200c9a66/v14 | ef:flow/f214600a-6555-11dd-ad8b-0800200c9a66/v15 |
| ef:activity/change/20260820T0738569779880000/286249 | properties | ef:agent/rdkit_post_consensus | ef:flow/f214600a-6555-11dd-ad8b-0800200c9a66/v15 | ef:flow/f214600a-6555-11dd-ad8b-0800200c9a66/v16 |
| ef:activity/change/20260820T0738569779880000/291613 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/f214600a-6555-11dd-ad8b-0800200c9a66/v16 | ef:flow/f214600a-6555-11dd-ad8b-0800200c9a66/v17 |
| ef:activity/change/20260820T0738569779880000/378359 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/f214600a-6555-11dd-ad8b-0800200c9a66/v17 | ef:flow/f214600a-6555-11dd-ad8b-0800200c9a66/v18 |
| ef:activity/change/20260820T0738569779880000/393768 | properties | ef:agent/normalise_property_values | ef:flow/f214600a-6555-11dd-ad8b-0800200c9a66/v18 | ef:flow/f214600a-6555-11dd-ad8b-0800200c9a66/v19 |
| ef:activity/change/20260820T0738569779880000/402938 | types | ef:agent/link_flows_to_their_substance | ef:flow/f214600a-6555-11dd-ad8b-0800200c9a66/v19 | ef:flow/f214600a-6555-11dd-ad8b-0800200c9a66/v20 |
| ef:activity/change/20260820T0738569779880000/402939 | roles | ef:agent/link_flows_to_their_substance | ef:flow/f214600a-6555-11dd-ad8b-0800200c9a66/v20 | ef:flow/f214600a-6555-11dd-ad8b-0800200c9a66/v21 |