Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 6 enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus the substance's answer, copied onto its flow
altLabel 2 consensus_match, dedupe_altlabels Deduplicated altLabel values and removed entries matching prefLabel
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=(2s)-{[(benzyloxy)carbonyl]amino}(cyclohexyl)aceticacid||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); group_sources=['pubchem']; cas_sources={'69901-75-3': ['pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-7248b5cd61c61b9b: {'69901-75-3': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['69901-75-3']; matched_chebi_ids=[]; candidate_pubchem_cids=[3706781, 14510026, 16218812, 18941944, 70066006]; selected_pubchem_cids=[16218812]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

20
# Step Field From To Why
4,654 bootstrap_labels prefLabel [{"@value":"(2s)-{[(benzyloxy)carbonyl]amino}(cyclohexyl)acetic acid","@language":"en","source":{"prov:wasGeneratedBy":… Bootstrapped prefLabel from legacy name field
4,655 bootstrap_labels name (2s)-{[(benzyloxy)carbonyl]amino}(cyclohexyl)acetic acid Purged legacy name field to enforce prefLabel usage
4,656 bootstrap_labels synonyms ["organic","vrt-126016"] [] Removed legacy synonyms field in favor of structured labels
195,674 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Ocean"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
195,675 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-ocea Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
214,900 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
222,167 normalize_name_case prefLabel [{"@value":"(2s)-{[(benzyloxy)carbonyl]amino}(cyclohexyl)acetic acid","@language":"en","source":{"prov:wasGeneratedBy":… [{"@value":"(2s)-{[(benzyloxy)carbonyl]amino}(cyclohexyl)acetic Acid","@language":"en","source":{"prov:wasGeneratedBy":… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
231,662 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C16H21NO4"… Added ChEBI/PubChem properties (chebi_ids=0, pubchem_cids=1)
231,663 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
231,664 enrich_references references [] [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J2.538.208K","provenance":{"prov:wasGeneratedBy":"enrich_refer… Added references with provenance; cas_numbers=['69901-75-3']; matched_chebi_ids=[]; candidate_pubchem_cids=[3706781, 14510026, 16218812, 18941944, 70066006]; selected_pubchem_cids=[16218812]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
249,611 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C16H21NO4"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C16H21NO4"… rdkit_pre_consensus from 'C1CCC(CC1)C(C(=O)O)NC(=O)OCC2=CC=CC=C2'; added: inchi2d_string, molecular_mass, monoisotopic_mass
257,688 consensus_match altLabel [] [{"@value":"(2S)-2-Cyclohexyl-2-(phenylmethoxycarbonylamino)acetic acid","@language":"en","source":{"prov:wasGeneratedB… group_key=(2s)-{[(benzyloxy)carbonyl]amino}(cyclohexyl)aceticacid||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); cas=69901-75-3; added Common Chemistry CAS names as altLabel: (2S)-2-Cyclohexyl-2-(phenylmethoxycarbonylamino)acetic acid, (<em>S</em>)-2-(((Benzyloxy)carbonyl)amino)-2-cyclohexylaceticacid, (α<em>S</em>)-α-[[(Phenylmethoxy)carbonyl]amino]cyclohexaneacetic acid, Cyclohexaneacetic acid, α-[[(phenylmethoxy)carbonyl]amino]-, (<em>S</em>)-, Cyclohexaneacetic acid, α-[[(phenylmethoxy)carbonyl]amino]-, (α<em>S</em>)-; object_uuid=fo-7248b5cd61c61b9b
257,689 consensus_match cas_match_labels {"69901-75-3":"exactMatch"} group_key=(2s)-{[(benzyloxy)carbonyl]amino}(cyclohexyl)aceticacid||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); group_sources=['pubchem']; cas_sources={'69901-75-3': ['pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-7248b5cd61c61b9b: {'69901-75-3': 'exactMatch'}
274,757 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C16H21NO4"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C16H21NO4"… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '(2s)-{[(benzyloxy)carbonyl]amino}(cyclohexyl)acetic Acid'
281,219 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C16H21NO4"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C16H21NO4"… rdkit_post_consensus from 'O=C(N[C@H](C(=O)O)C1CCCCC1)OCc1ccccc1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
292,239 dedupe_altlabels altLabel [{"@value":"(2S)-2-Cyclohexyl-2-(phenylmethoxycarbonylamino)acetic acid","@language":"en","source":{"prov:wasGeneratedB… [{"@value":"(2S)-2-Cyclohexyl-2-(phenylmethoxycarbonylamino)acetic acid","@language":"en","source":{"prov:wasGeneratedB… Deduplicated altLabel values and removed entries matching prefLabel
378,889 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/f28c42c6-6f8b-… associations resolved on the elementary layer
389,065 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C16H21NO4"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C16H21NO4"… typed the way the ontology types it
396,051 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
396,052 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C16H21NO4"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C16H21NO4"… the substance's answer, copied onto its flow

PROV-O trail

20 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T1416470405690000/4654 prefLabel ef:agent/bootstrap_labels ef:flow/f28c42c6-6f8b-423d-b61b-c2e54e8feda6/v0 ef:flow/f28c42c6-6f8b-423d-b61b-c2e54e8feda6/v1
ef:activity/change/20260820T1416470405690000/4655 name ef:agent/bootstrap_labels ef:flow/f28c42c6-6f8b-423d-b61b-c2e54e8feda6/v1 ef:flow/f28c42c6-6f8b-423d-b61b-c2e54e8feda6/v2
ef:activity/change/20260820T1416470405690000/4656 synonyms ef:agent/bootstrap_labels ef:flow/f28c42c6-6f8b-423d-b61b-c2e54e8feda6/v2 ef:flow/f28c42c6-6f8b-423d-b61b-c2e54e8feda6/v3
ef:activity/change/20260820T1416470405690000/195674 context ef:agent/default_context_mapping ef:flow/f28c42c6-6f8b-423d-b61b-c2e54e8feda6/v3 ef:flow/f28c42c6-6f8b-423d-b61b-c2e54e8feda6/v4
ef:activity/change/20260820T1416470405690000/195675 context_iri ef:agent/default_context_mapping ef:flow/f28c42c6-6f8b-423d-b61b-c2e54e8feda6/v4 ef:flow/f28c42c6-6f8b-423d-b61b-c2e54e8feda6/v5
ef:activity/change/20260820T1416470405690000/214900 unit_iri ef:agent/unit_normalization ef:flow/f28c42c6-6f8b-423d-b61b-c2e54e8feda6/v5 ef:flow/f28c42c6-6f8b-423d-b61b-c2e54e8feda6/v6
ef:activity/change/20260820T1416470405690000/222167 prefLabel ef:agent/normalize_name_case ef:flow/f28c42c6-6f8b-423d-b61b-c2e54e8feda6/v6 ef:flow/f28c42c6-6f8b-423d-b61b-c2e54e8feda6/v7
ef:activity/change/20260820T1416470405690000/231662 properties ef:agent/enrich_references ef:flow/f28c42c6-6f8b-423d-b61b-c2e54e8feda6/v7 ef:flow/f28c42c6-6f8b-423d-b61b-c2e54e8feda6/v8
ef:activity/change/20260820T1416470405690000/231663 skos_definition ef:agent/enrich_references ef:flow/f28c42c6-6f8b-423d-b61b-c2e54e8feda6/v8 ef:flow/f28c42c6-6f8b-423d-b61b-c2e54e8feda6/v9
ef:activity/change/20260820T1416470405690000/231664 references ef:agent/enrich_references ef:flow/f28c42c6-6f8b-423d-b61b-c2e54e8feda6/v9 ef:flow/f28c42c6-6f8b-423d-b61b-c2e54e8feda6/v10
ef:activity/change/20260820T1416470405690000/249611 properties ef:agent/rdkit_pre_consensus ef:flow/f28c42c6-6f8b-423d-b61b-c2e54e8feda6/v10 ef:flow/f28c42c6-6f8b-423d-b61b-c2e54e8feda6/v11
ef:activity/change/20260820T1416470405690000/257688 altLabel ef:agent/consensus_match ef:flow/f28c42c6-6f8b-423d-b61b-c2e54e8feda6/v11 ef:flow/f28c42c6-6f8b-423d-b61b-c2e54e8feda6/v12
ef:activity/change/20260820T1416470405690000/257689 cas_match_labels ef:agent/consensus_match ef:flow/f28c42c6-6f8b-423d-b61b-c2e54e8feda6/v12 ef:flow/f28c42c6-6f8b-423d-b61b-c2e54e8feda6/v13
ef:activity/change/20260820T1416470405690000/274757 properties ef:agent/opsin_iupac ef:flow/f28c42c6-6f8b-423d-b61b-c2e54e8feda6/v13 ef:flow/f28c42c6-6f8b-423d-b61b-c2e54e8feda6/v14
ef:activity/change/20260820T1416470405690000/281219 properties ef:agent/rdkit_post_consensus ef:flow/f28c42c6-6f8b-423d-b61b-c2e54e8feda6/v14 ef:flow/f28c42c6-6f8b-423d-b61b-c2e54e8feda6/v15
ef:activity/change/20260820T1416470405690000/292239 altLabel ef:agent/dedupe_altlabels ef:flow/f28c42c6-6f8b-423d-b61b-c2e54e8feda6/v15 ef:flow/f28c42c6-6f8b-423d-b61b-c2e54e8feda6/v16
ef:activity/change/20260820T1416470405690000/378889 concept_associations ef:agent/carry_associations_onto_flows ef:flow/f28c42c6-6f8b-423d-b61b-c2e54e8feda6/v16 ef:flow/f28c42c6-6f8b-423d-b61b-c2e54e8feda6/v17
ef:activity/change/20260820T1416470405690000/389065 properties ef:agent/normalise_property_values ef:flow/f28c42c6-6f8b-423d-b61b-c2e54e8feda6/v17 ef:flow/f28c42c6-6f8b-423d-b61b-c2e54e8feda6/v18
ef:activity/change/20260820T1416470405690000/396051 types ef:agent/link_flows_to_their_substance ef:flow/f28c42c6-6f8b-423d-b61b-c2e54e8feda6/v18 ef:flow/f28c42c6-6f8b-423d-b61b-c2e54e8feda6/v19
ef:activity/change/20260820T1416470405690000/396052 properties ef:agent/link_flows_to_their_substance ef:flow/f28c42c6-6f8b-423d-b61b-c2e54e8feda6/v19 ef:flow/f28c42c6-6f8b-423d-b61b-c2e54e8feda6/v20

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