Retrorsine
Everything that changed this flow. Back to the flow
f2917527-e53e-463e-a416-f75dae8654c5
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 6 | enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | the substance's answer, copied onto its flow |
| altLabel | 2 | consensus_match, strip_catalogue_altlabels | Removed 1 catalogue altLabel value(s): 'NSC 107659' (registry code) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=retrorsine||dimension=Environmental > media=Water > water_body=Unknown; group_sources=['chebi', 'pubchem']; cas_sources={'480-54-6': ['chebi', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-8a02e72cb20902fc: {'480-54-6': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['480-54-6']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_8822']; candidate_pubchem_cids=[10191, 259991, 267891, 5281743, 5281756, 5352411, 5462906, 12311390, 73759794, 126968828, 134159383]; selected_pubchem_cids=[5281743]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
20| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 5,863 | bootstrap_labels | prefLabel | — | [{"@value":"retrorsine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… | Bootstrapped prefLabel from legacy name field |
| 5,864 | bootstrap_labels | name | retrorsine | — | Purged legacy name field to enforce prefLabel usage |
| 5,865 | bootstrap_labels | synonyms | ["(1,6)Dioxacyclododecino(2,3,4-gh)pyrrolizine-2,7-dione, 3-ethylidene-3,4,5,6,9,11,13,14,14a,14b-decahydro-6-hydroxy-6… | [] | Removed legacy synonyms field in favor of structured labels |
| 195,676 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Water","water_body":"Surface water"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water |
| 195,677 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-wate-suwa | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water |
| 215,298 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 222,448 | normalize_name_case | prefLabel | [{"@value":"retrorsine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… | [{"@value":"Retrorsine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 232,819 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C18H25NO6"… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 232,820 | enrich_references | skos_definition | — | [] | Merged ChEBI/PubChem definitions into skos:definition |
| 232,821 | enrich_references | references | [] | [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J12.337D","provenance":{"prov:wasGeneratedBy":"enrich_referenc… | Added references with provenance; cas_numbers=['480-54-6']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_8822']; candidate_pubchem_cids=[10191, 259991, 267891, 5281743, 5281756, 5352411, 5462906, 12311390, 73759794, 126968828, 134159383]; selected_pubchem_cids=[5281743]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 249,939 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C18H25NO6"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C18H25NO6"… | rdkit_pre_consensus from 'C/C=C\\1/C[C@H]([C@@](C(=O)OCC2=CCN3[C@H]2[C@@H](CC3)OC1=O)(CO)O)C'; added: monoisotopic_mass |
| 271,478 | consensus_match | altLabel | [] | [{"@value":"(3<em>Z</em>,5<em>R</em>,6<em>S</em>,14a<em>R</em>,14b<em>R</em>)-3-Ethylidene-3,4,5,6,9,11,13,14,14a,14b-d… | group_key=retrorsine||dimension=Environmental > media=Water > water_body=Unknown; cas=480-54-6; added Common Chemistry CAS names as altLabel: (3<em>Z</em>,5<em>R</em>,6<em>S</em>,14a<em>R</em>,14b<em>R</em>)-3-Ethylidene-3,4,5,6,9,11,13,14,14a,14b-decahydro-6-hydroxy-6-(hydroxymethyl)-5-methyl[1,6]dioxacyclododecino[2,3,4-<em>gh</em>]pyrrolizine-2,7-dione, NSC 107659, Retrorsin, Senecionan-11,16-dione, 12,18-dihydroxy-, [1,6]Dioxacyclododecino[2,3,4-<em>gh</em>]pyrrolizine-2,7-dione, 3-ethylidene-3,4,5,6,9,11,13,14,14a,14b-decahydro-6-hydroxy-6-(hydroxymethyl)-5-methyl-, (3<em>Z</em>,5<em>R</em>,6<em>S</em>,14a<em>R</em>,14b<em>R</em>)-, [1,6]Dioxacyclododecino[2,3,4-<em>gh</em>]pyrrolizine-2,7-dione, 3-ethylidene-3,4,5,6,9,11,13,14,14a,14b-decahydro-6-hydroxy-6-(hydroxymethyl)-5-methyl-, [5<em>R</em>-(3<em>Z</em>,5<em>R</em>*,6<em>S</em>*,14a<em>R</em>*,14b<em>R</em>*)]-, β-Longilobine; object_uuid=fo-8a02e72cb20902fc |
| 271,479 | consensus_match | cas_match_labels | — | {"480-54-6":"exactMatch"} | group_key=retrorsine||dimension=Environmental > media=Water > water_body=Unknown; group_sources=['chebi', 'pubchem']; cas_sources={'480-54-6': ['chebi', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-8a02e72cb20902fc: {'480-54-6': 'exactMatch'} |
| 275,074 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C18H25NO6"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C18H25NO6"… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '(3Z,5R,6S,14aR,14bR)-3-Ethylidene-3,4,5,6,9,11,13,14,14a,14b-decahydro-6-hydroxy-6-(hydroxymethyl)-5-methyl[1,6]dioxacyclododecino[2,3,4-gh]pyrrolizine-2,7-dione' |
| 281,568 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C18H25NO6"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C18H25NO6"… | rdkit_post_consensus from 'C/C=C1/C[C@@H](C)[C@](O)(CO)C(=O)OCC2=CCN3CC[C@@H](OC1=O)[C@@H]23'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 288,448 | strip_catalogue_altlabels | altLabel | [{"@value":"(3<em>Z</em>,5<em>R</em>,6<em>S</em>,14a<em>R</em>,14b<em>R</em>)-3-Ethylidene-3,4,5,6,9,11,13,14,14a,14b-d… | [{"@value":"(3Z,5R,6S,14aR,14bR)-3-Ethylidene-3,4,5,6,9,11,13,14,14a,14b-decahydro-6-hydroxy-6-(hydroxymethyl)-5-methyl… | Removed 1 catalogue altLabel value(s): 'NSC 107659' (registry code) |
| 378,870 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/f2917527-e53e-… | associations resolved on the elementary layer |
| 389,383 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C18H25NO6"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C18H25NO6"… | typed the way the ontology types it |
| 396,508 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
| 396,509 | link_flows_to_their_substance | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C18H25NO6"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C18H25NO6"… | the substance's answer, copied onto its flow |
PROV-O trail
20 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260821T1554374006150000/5863 | prefLabel | ef:agent/bootstrap_labels | ef:flow/f2917527-e53e-463e-a416-f75dae8654c5/v0 | ef:flow/f2917527-e53e-463e-a416-f75dae8654c5/v1 |
| ef:activity/change/20260821T1554374006150000/5864 | name | ef:agent/bootstrap_labels | ef:flow/f2917527-e53e-463e-a416-f75dae8654c5/v1 | ef:flow/f2917527-e53e-463e-a416-f75dae8654c5/v2 |
| ef:activity/change/20260821T1554374006150000/5865 | synonyms | ef:agent/bootstrap_labels | ef:flow/f2917527-e53e-463e-a416-f75dae8654c5/v2 | ef:flow/f2917527-e53e-463e-a416-f75dae8654c5/v3 |
| ef:activity/change/20260821T1554374006150000/195676 | context | ef:agent/default_context_mapping | ef:flow/f2917527-e53e-463e-a416-f75dae8654c5/v3 | ef:flow/f2917527-e53e-463e-a416-f75dae8654c5/v4 |
| ef:activity/change/20260821T1554374006150000/195677 | context_iri | ef:agent/default_context_mapping | ef:flow/f2917527-e53e-463e-a416-f75dae8654c5/v4 | ef:flow/f2917527-e53e-463e-a416-f75dae8654c5/v5 |
| ef:activity/change/20260821T1554374006150000/215298 | unit_iri | ef:agent/unit_normalization | ef:flow/f2917527-e53e-463e-a416-f75dae8654c5/v5 | ef:flow/f2917527-e53e-463e-a416-f75dae8654c5/v6 |
| ef:activity/change/20260821T1554374006150000/222448 | prefLabel | ef:agent/normalize_name_case | ef:flow/f2917527-e53e-463e-a416-f75dae8654c5/v6 | ef:flow/f2917527-e53e-463e-a416-f75dae8654c5/v7 |
| ef:activity/change/20260821T1554374006150000/232819 | properties | ef:agent/enrich_references | ef:flow/f2917527-e53e-463e-a416-f75dae8654c5/v7 | ef:flow/f2917527-e53e-463e-a416-f75dae8654c5/v8 |
| ef:activity/change/20260821T1554374006150000/232820 | skos_definition | ef:agent/enrich_references | ef:flow/f2917527-e53e-463e-a416-f75dae8654c5/v8 | ef:flow/f2917527-e53e-463e-a416-f75dae8654c5/v9 |
| ef:activity/change/20260821T1554374006150000/232821 | references | ef:agent/enrich_references | ef:flow/f2917527-e53e-463e-a416-f75dae8654c5/v9 | ef:flow/f2917527-e53e-463e-a416-f75dae8654c5/v10 |
| ef:activity/change/20260821T1554374006150000/249939 | properties | ef:agent/rdkit_pre_consensus | ef:flow/f2917527-e53e-463e-a416-f75dae8654c5/v10 | ef:flow/f2917527-e53e-463e-a416-f75dae8654c5/v11 |
| ef:activity/change/20260821T1554374006150000/271478 | altLabel | ef:agent/consensus_match | ef:flow/f2917527-e53e-463e-a416-f75dae8654c5/v11 | ef:flow/f2917527-e53e-463e-a416-f75dae8654c5/v12 |
| ef:activity/change/20260821T1554374006150000/271479 | cas_match_labels | ef:agent/consensus_match | ef:flow/f2917527-e53e-463e-a416-f75dae8654c5/v12 | ef:flow/f2917527-e53e-463e-a416-f75dae8654c5/v13 |
| ef:activity/change/20260821T1554374006150000/275074 | properties | ef:agent/opsin_iupac | ef:flow/f2917527-e53e-463e-a416-f75dae8654c5/v13 | ef:flow/f2917527-e53e-463e-a416-f75dae8654c5/v14 |
| ef:activity/change/20260821T1554374006150000/281568 | properties | ef:agent/rdkit_post_consensus | ef:flow/f2917527-e53e-463e-a416-f75dae8654c5/v14 | ef:flow/f2917527-e53e-463e-a416-f75dae8654c5/v15 |
| ef:activity/change/20260821T1554374006150000/288448 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/f2917527-e53e-463e-a416-f75dae8654c5/v15 | ef:flow/f2917527-e53e-463e-a416-f75dae8654c5/v16 |
| ef:activity/change/20260821T1554374006150000/378870 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/f2917527-e53e-463e-a416-f75dae8654c5/v16 | ef:flow/f2917527-e53e-463e-a416-f75dae8654c5/v17 |
| ef:activity/change/20260821T1554374006150000/389383 | properties | ef:agent/normalise_property_values | ef:flow/f2917527-e53e-463e-a416-f75dae8654c5/v17 | ef:flow/f2917527-e53e-463e-a416-f75dae8654c5/v18 |
| ef:activity/change/20260821T1554374006150000/396508 | types | ef:agent/link_flows_to_their_substance | ef:flow/f2917527-e53e-463e-a416-f75dae8654c5/v18 | ef:flow/f2917527-e53e-463e-a416-f75dae8654c5/v19 |
| ef:activity/change/20260821T1554374006150000/396509 | properties | ef:agent/link_flows_to_their_substance | ef:flow/f2917527-e53e-463e-a416-f75dae8654c5/v19 | ef:flow/f2917527-e53e-463e-a416-f75dae8654c5/v20 |