Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 4 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, dedupe_altlabels Deduplicated altLabel values and removed entries matching prefLabel
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=phosphorustrichloride||dimension=Environmental > media=Air > indoor=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'7719-12-2': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-1d1c339ff8fae9e2: {'7719-12-2': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['7719-12-2']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_30334']; candidate_pubchem_cids=[24387]; selected_pubchem_cids=[24387]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

19
# Step Field From To Why
1,823 bootstrap_labels prefLabel [{"@value":"phosphorus trichloride","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttrib… Bootstrapped prefLabel from legacy name field
1,824 bootstrap_labels name phosphorus trichloride Purged legacy name field to enforce prefLabel usage
1,825 bootstrap_labels synonyms ["phosphorustrichloride","phosphorus trichloride","phosphorous trichloride","albritephosphorustrichloride","chlorideofp… [] Removed legacy synonyms field in favor of structured labels
196,192 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Non-agricultural"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
196,193 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-noag Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
213,946 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
221,516 normalize_name_case prefLabel [{"@value":"phosphorus trichloride","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttrib… [{"@value":"Phosphorus Trichloride","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttrib… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
228,933 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cl3P"],"at… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
228,934 enrich_references skos_definition [{"@value":"A phosphorus halide with formula Cl3P.","@language":"en","provenance":{"prov:wasGeneratedBy":"enrich_refere… Merged ChEBI/PubChem definitions into skos:definition
228,935 enrich_references references [] [{"@id":"gmelin:1869","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"conse… Added references with provenance; cas_numbers=['7719-12-2']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_30334']; candidate_pubchem_cids=[24387]; selected_pubchem_cids=[24387]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
254,590 chebi_altlabels altLabel [] [{"@value":"PCl3","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… Added 6 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
270,725 consensus_match altLabel [{"@value":"PCl3","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… [{"@value":"PCl3","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… group_key=phosphorustrichloride||dimension=Environmental > media=Air > indoor=Unknown; cas=7719-12-2; added Common Chemistry CAS names as altLabel: Phosphanyl trichloride, Phosphine, trichloro-, Phosphorous chloride, Phosphorus chloride (Cl<sub>6</sub>P<sub>2</sub>), Phosphorus chloride (PCl<sub>3</sub>), Trichlorophosphine; object_uuid=fo-1d1c339ff8fae9e2
270,726 consensus_match cas_match_labels {"7719-12-2":"exactMatch"} group_key=phosphorustrichloride||dimension=Environmental > media=Air > indoor=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'7719-12-2': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-1d1c339ff8fae9e2: {'7719-12-2': 'exactMatch'}
273,942 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cl3P"],"at… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cl3P"],"at… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Phosphorus Trichloride'
280,341 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cl3P"],"at… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cl3P"],"at… rdkit_post_consensus from 'ClP(Cl)Cl'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
292,057 dedupe_altlabels altLabel [{"@value":"PCl3","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… [{"@value":"PCl3","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… Deduplicated altLabel values and removed entries matching prefLabel
379,129 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/f37f6f3e-372c-… associations resolved on the elementary layer
388,232 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cl3P"],"at… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cl3P"],"at… typed the way the ontology types it
394,879 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

19 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T1554374006150000/1823 prefLabel ef:agent/bootstrap_labels ef:flow/f37f6f3e-372c-425e-a8d8-a27d59980b0f/v0 ef:flow/f37f6f3e-372c-425e-a8d8-a27d59980b0f/v1
ef:activity/change/20260821T1554374006150000/1824 name ef:agent/bootstrap_labels ef:flow/f37f6f3e-372c-425e-a8d8-a27d59980b0f/v1 ef:flow/f37f6f3e-372c-425e-a8d8-a27d59980b0f/v2
ef:activity/change/20260821T1554374006150000/1825 synonyms ef:agent/bootstrap_labels ef:flow/f37f6f3e-372c-425e-a8d8-a27d59980b0f/v2 ef:flow/f37f6f3e-372c-425e-a8d8-a27d59980b0f/v3
ef:activity/change/20260821T1554374006150000/196192 context ef:agent/default_context_mapping ef:flow/f37f6f3e-372c-425e-a8d8-a27d59980b0f/v3 ef:flow/f37f6f3e-372c-425e-a8d8-a27d59980b0f/v4
ef:activity/change/20260821T1554374006150000/196193 context_iri ef:agent/default_context_mapping ef:flow/f37f6f3e-372c-425e-a8d8-a27d59980b0f/v4 ef:flow/f37f6f3e-372c-425e-a8d8-a27d59980b0f/v5
ef:activity/change/20260821T1554374006150000/213946 unit_iri ef:agent/unit_normalization ef:flow/f37f6f3e-372c-425e-a8d8-a27d59980b0f/v5 ef:flow/f37f6f3e-372c-425e-a8d8-a27d59980b0f/v6
ef:activity/change/20260821T1554374006150000/221516 prefLabel ef:agent/normalize_name_case ef:flow/f37f6f3e-372c-425e-a8d8-a27d59980b0f/v6 ef:flow/f37f6f3e-372c-425e-a8d8-a27d59980b0f/v7
ef:activity/change/20260821T1554374006150000/228933 properties ef:agent/enrich_references ef:flow/f37f6f3e-372c-425e-a8d8-a27d59980b0f/v7 ef:flow/f37f6f3e-372c-425e-a8d8-a27d59980b0f/v8
ef:activity/change/20260821T1554374006150000/228934 skos_definition ef:agent/enrich_references ef:flow/f37f6f3e-372c-425e-a8d8-a27d59980b0f/v8 ef:flow/f37f6f3e-372c-425e-a8d8-a27d59980b0f/v9
ef:activity/change/20260821T1554374006150000/228935 references ef:agent/enrich_references ef:flow/f37f6f3e-372c-425e-a8d8-a27d59980b0f/v9 ef:flow/f37f6f3e-372c-425e-a8d8-a27d59980b0f/v10
ef:activity/change/20260821T1554374006150000/254590 altLabel ef:agent/chebi_altlabels ef:flow/f37f6f3e-372c-425e-a8d8-a27d59980b0f/v10 ef:flow/f37f6f3e-372c-425e-a8d8-a27d59980b0f/v11
ef:activity/change/20260821T1554374006150000/270725 altLabel ef:agent/consensus_match ef:flow/f37f6f3e-372c-425e-a8d8-a27d59980b0f/v11 ef:flow/f37f6f3e-372c-425e-a8d8-a27d59980b0f/v12
ef:activity/change/20260821T1554374006150000/270726 cas_match_labels ef:agent/consensus_match ef:flow/f37f6f3e-372c-425e-a8d8-a27d59980b0f/v12 ef:flow/f37f6f3e-372c-425e-a8d8-a27d59980b0f/v13
ef:activity/change/20260821T1554374006150000/273942 properties ef:agent/opsin_iupac ef:flow/f37f6f3e-372c-425e-a8d8-a27d59980b0f/v13 ef:flow/f37f6f3e-372c-425e-a8d8-a27d59980b0f/v14
ef:activity/change/20260821T1554374006150000/280341 properties ef:agent/rdkit_post_consensus ef:flow/f37f6f3e-372c-425e-a8d8-a27d59980b0f/v14 ef:flow/f37f6f3e-372c-425e-a8d8-a27d59980b0f/v15
ef:activity/change/20260821T1554374006150000/292057 altLabel ef:agent/dedupe_altlabels ef:flow/f37f6f3e-372c-425e-a8d8-a27d59980b0f/v15 ef:flow/f37f6f3e-372c-425e-a8d8-a27d59980b0f/v16
ef:activity/change/20260821T1554374006150000/379129 concept_associations ef:agent/carry_associations_onto_flows ef:flow/f37f6f3e-372c-425e-a8d8-a27d59980b0f/v16 ef:flow/f37f6f3e-372c-425e-a8d8-a27d59980b0f/v17
ef:activity/change/20260821T1554374006150000/388232 properties ef:agent/normalise_property_values ef:flow/f37f6f3e-372c-425e-a8d8-a27d59980b0f/v17 ef:flow/f37f6f3e-372c-425e-a8d8-a27d59980b0f/v18
ef:activity/change/20260821T1554374006150000/394879 types ef:agent/link_flows_to_their_substance ef:flow/f37f6f3e-372c-425e-a8d8-a27d59980b0f/v18 ef:flow/f37f6f3e-372c-425e-a8d8-a27d59980b0f/v19

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