Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 4 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 1 catalogue altLabel value(s): 'NSC 87880' (registry code)
prefLabel 3 bootstrap_labels, consensus_match, normalize_name_case cas=626-17-5; cc_chebi_agreed_name='Isophthalonitrile'; object_uuid=fo-882e54f63af04267
cas_match_labels 1 consensus_match group_key=benzene-1,3-dicarbonitrile||dimension=Environmental > media=Air > strata=Medium stack, <150 meters > population_density=Rural (<1000 people/square mile); group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'626-17-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-882e54f63af04267: {'626-17-5': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['626-17-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_38218']; candidate_pubchem_cids=[12276]; selected_pubchem_cids=[12276]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

22
# Step Field From To Why
22,979 bootstrap_labels prefLabel [{"@value":"benzene-1,3-dicarbonitrile","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAt… Bootstrapped prefLabel from legacy name field
22,980 bootstrap_labels name benzene-1,3-dicarbonitrile Purged legacy name field to enforce prefLabel usage
22,981 bootstrap_labels synonyms ["1,3-Benzendikarbonitril","1,3-Benzenedicarbonitrile","1,3-Benzodinitrile","1,3-DICYANOBENZENE","3-Cyanobenzonitrile",… [] Removed legacy synonyms field in favor of structured labels
196,292 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Agricultural"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
196,293 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-agri Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
220,598 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
226,248 normalize_name_case prefLabel [{"@value":"benzene-1,3-dicarbonitrile","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAt… [{"@value":"Benzene-1,3-dicarbonitrile","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAt… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
247,772 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H4N2"],"… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
247,773 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
247,774 enrich_references references [] [{"@id":"beilstein:2038364","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":… Added references with provenance; cas_numbers=['626-17-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_38218']; candidate_pubchem_cids=[12276]; selected_pubchem_cids=[12276]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
254,257 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H4N2"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H4N2"],"… rdkit_pre_consensus from 'C1=CC(=CC(=C1)C#N)C#N'; added: monoisotopic_mass
257,285 chebi_altlabels altLabel [] [{"@value":"1,3-Benzenedicarbonitrile","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttr… Added 6 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
264,095 consensus_match prefLabel [{"@value":"Benzene-1,3-dicarbonitrile","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAt… [{"@value":"Isophthalonitrile","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo… cas=626-17-5; cc_chebi_agreed_name='Isophthalonitrile'; object_uuid=fo-882e54f63af04267
264,096 consensus_match altLabel [{"@value":"1,3-Benzenedicarbonitrile","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttr… [{"@value":"1,3-Benzenedicarbonitrile","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttr… cas=626-17-5; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-882e54f63af04267
264,097 consensus_match altLabel [{"@value":"1,3-Benzenedicarbonitrile","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttr… [{"@value":"1,3-Benzenedicarbonitrile","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttr… group_key=benzene-1,3-dicarbonitrile||dimension=Environmental > media=Air > strata=Medium stack, <150 meters > population_density=Rural (<1000 people/square mile); cas=626-17-5; added Common Chemistry CAS names as altLabel: 1,3-Benzodinitrile, 1,3-Bis(cyano)benzene, <em>m</em>-Benzenedinitrile, <em>m</em>-Cyanobenzonitrile, Meta-dicyanobenzene, NSC 87880; object_uuid=fo-882e54f63af04267
264,098 consensus_match cas_match_labels {"626-17-5":"exactMatch"} group_key=benzene-1,3-dicarbonitrile||dimension=Environmental > media=Air > strata=Medium stack, <150 meters > population_density=Rural (<1000 people/square mile); group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'626-17-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-882e54f63af04267: {'626-17-5': 'exactMatch'}
279,489 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H4N2"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H4N2"],"… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Isophthalonitrile'
286,366 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H4N2"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H4N2"],"… rdkit_post_consensus from 'N#Cc1cccc(C#N)c1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
291,706 strip_catalogue_altlabels altLabel [{"@value":"1,3-Benzenedicarbonitrile","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttr… [{"@value":"1,3-Benzenedicarbonitrile","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttr… Removed 1 catalogue altLabel value(s): 'NSC 87880' (registry code)
379,179 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/f3b5b1d4-f154-… associations resolved on the elementary layer
393,883 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H4N2"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H4N2"],"… typed the way the ontology types it
403,102 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

22 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260822T0600486828500000/22979 prefLabel ef:agent/bootstrap_labels ef:flow/f3b5b1d4-f154-475a-b99d-3e10d483d278/v0 ef:flow/f3b5b1d4-f154-475a-b99d-3e10d483d278/v1
ef:activity/change/20260822T0600486828500000/22980 name ef:agent/bootstrap_labels ef:flow/f3b5b1d4-f154-475a-b99d-3e10d483d278/v1 ef:flow/f3b5b1d4-f154-475a-b99d-3e10d483d278/v2
ef:activity/change/20260822T0600486828500000/22981 synonyms ef:agent/bootstrap_labels ef:flow/f3b5b1d4-f154-475a-b99d-3e10d483d278/v2 ef:flow/f3b5b1d4-f154-475a-b99d-3e10d483d278/v3
ef:activity/change/20260822T0600486828500000/196292 context ef:agent/default_context_mapping ef:flow/f3b5b1d4-f154-475a-b99d-3e10d483d278/v3 ef:flow/f3b5b1d4-f154-475a-b99d-3e10d483d278/v4
ef:activity/change/20260822T0600486828500000/196293 context_iri ef:agent/default_context_mapping ef:flow/f3b5b1d4-f154-475a-b99d-3e10d483d278/v4 ef:flow/f3b5b1d4-f154-475a-b99d-3e10d483d278/v5
ef:activity/change/20260822T0600486828500000/220598 unit_iri ef:agent/unit_normalization ef:flow/f3b5b1d4-f154-475a-b99d-3e10d483d278/v5 ef:flow/f3b5b1d4-f154-475a-b99d-3e10d483d278/v6
ef:activity/change/20260822T0600486828500000/226248 prefLabel ef:agent/normalize_name_case ef:flow/f3b5b1d4-f154-475a-b99d-3e10d483d278/v6 ef:flow/f3b5b1d4-f154-475a-b99d-3e10d483d278/v7
ef:activity/change/20260822T0600486828500000/247772 properties ef:agent/enrich_references ef:flow/f3b5b1d4-f154-475a-b99d-3e10d483d278/v7 ef:flow/f3b5b1d4-f154-475a-b99d-3e10d483d278/v8
ef:activity/change/20260822T0600486828500000/247773 skos_definition ef:agent/enrich_references ef:flow/f3b5b1d4-f154-475a-b99d-3e10d483d278/v8 ef:flow/f3b5b1d4-f154-475a-b99d-3e10d483d278/v9
ef:activity/change/20260822T0600486828500000/247774 references ef:agent/enrich_references ef:flow/f3b5b1d4-f154-475a-b99d-3e10d483d278/v9 ef:flow/f3b5b1d4-f154-475a-b99d-3e10d483d278/v10
ef:activity/change/20260822T0600486828500000/254257 properties ef:agent/rdkit_pre_consensus ef:flow/f3b5b1d4-f154-475a-b99d-3e10d483d278/v10 ef:flow/f3b5b1d4-f154-475a-b99d-3e10d483d278/v11
ef:activity/change/20260822T0600486828500000/257285 altLabel ef:agent/chebi_altlabels ef:flow/f3b5b1d4-f154-475a-b99d-3e10d483d278/v11 ef:flow/f3b5b1d4-f154-475a-b99d-3e10d483d278/v12
ef:activity/change/20260822T0600486828500000/264095 prefLabel ef:agent/consensus_match ef:flow/f3b5b1d4-f154-475a-b99d-3e10d483d278/v12 ef:flow/f3b5b1d4-f154-475a-b99d-3e10d483d278/v13
ef:activity/change/20260822T0600486828500000/264096 altLabel ef:agent/consensus_match ef:flow/f3b5b1d4-f154-475a-b99d-3e10d483d278/v13 ef:flow/f3b5b1d4-f154-475a-b99d-3e10d483d278/v14
ef:activity/change/20260822T0600486828500000/264097 altLabel ef:agent/consensus_match ef:flow/f3b5b1d4-f154-475a-b99d-3e10d483d278/v14 ef:flow/f3b5b1d4-f154-475a-b99d-3e10d483d278/v15
ef:activity/change/20260822T0600486828500000/264098 cas_match_labels ef:agent/consensus_match ef:flow/f3b5b1d4-f154-475a-b99d-3e10d483d278/v15 ef:flow/f3b5b1d4-f154-475a-b99d-3e10d483d278/v16
ef:activity/change/20260822T0600486828500000/279489 properties ef:agent/opsin_iupac ef:flow/f3b5b1d4-f154-475a-b99d-3e10d483d278/v16 ef:flow/f3b5b1d4-f154-475a-b99d-3e10d483d278/v17
ef:activity/change/20260822T0600486828500000/286366 properties ef:agent/rdkit_post_consensus ef:flow/f3b5b1d4-f154-475a-b99d-3e10d483d278/v17 ef:flow/f3b5b1d4-f154-475a-b99d-3e10d483d278/v18
ef:activity/change/20260822T0600486828500000/291706 altLabel ef:agent/strip_catalogue_altlabels ef:flow/f3b5b1d4-f154-475a-b99d-3e10d483d278/v18 ef:flow/f3b5b1d4-f154-475a-b99d-3e10d483d278/v19
ef:activity/change/20260822T0600486828500000/379179 concept_associations ef:agent/carry_associations_onto_flows ef:flow/f3b5b1d4-f154-475a-b99d-3e10d483d278/v19 ef:flow/f3b5b1d4-f154-475a-b99d-3e10d483d278/v20
ef:activity/change/20260822T0600486828500000/393883 properties ef:agent/normalise_property_values ef:flow/f3b5b1d4-f154-475a-b99d-3e10d483d278/v20 ef:flow/f3b5b1d4-f154-475a-b99d-3e10d483d278/v21
ef:activity/change/20260822T0600486828500000/403102 types ef:agent/link_flows_to_their_substance ef:flow/f3b5b1d4-f154-475a-b99d-3e10d483d278/v21 ef:flow/f3b5b1d4-f154-475a-b99d-3e10d483d278/v22

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