Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 6 enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus the substance's answer, copied onto its flow
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 1 catalogue altLabel value(s): 'NSC 21727' (registry code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=piperine||dimension=Environmental > media=Water > water_body=Surface water; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'94-62-2': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-5b9b2651c0fbdf17: {'94-62-2': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['94-62-2']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_28821']; candidate_pubchem_cids=[4840, 166351, 638024, 783108]; selected_pubchem_cids=[638024]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

21
# Step Field From To Why
15,741 bootstrap_labels prefLabel [{"@value":"piperine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… Bootstrapped prefLabel from legacy name field
15,742 bootstrap_labels name piperine Purged legacy name field to enforce prefLabel usage
15,743 bootstrap_labels synonyms ["(2E,4E)-5-(1,3-benzodioxol-5-yl)-1-piperidin-1-ylpenta-2,4-dien-1-one","(E,E) 1-[5-(1,3-benzodioxol-5-yl)-1-oxo-2,4-p… [] Removed legacy synonyms field in favor of structured labels
196,440 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Ocean"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
196,441 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-ocea Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
218,514 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
224,714 normalize_name_case prefLabel [{"@value":"piperine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… [{"@value":"Piperine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
242,008 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C17H19NO3"… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
242,009 enrich_references skos_definition [{"@value":"A N-acylpiperidine that is piperidine substituted by a (1E,3E)-1-(1,3-benzodioxol-5-yl)-5-oxopenta-1,3-dien… Merged ChEBI/PubChem definitions into skos:definition
242,010 enrich_references references [] [{"@id":"gmelin:341351","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"con… Added references with provenance; cas_numbers=['94-62-2']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_28821']; candidate_pubchem_cids=[4840, 166351, 638024, 783108]; selected_pubchem_cids=[638024]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
252,593 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C17H19NO3"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C17H19NO3"… rdkit_pre_consensus from 'C1CCN(CC1)C(=O)/C=C/C=C/C2=CC3=C(C=C2)OCO3'; added: monoisotopic_mass
256,465 chebi_altlabels altLabel [] [{"@value":"(E,E)-1-piperoylpiperidine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAtt… Added 7 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
270,765 consensus_match altLabel [{"@value":"(E,E)-1-piperoylpiperidine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAtt… [{"@value":"(E,E)-1-piperoylpiperidine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAtt… group_key=piperine||dimension=Environmental > media=Water > water_body=Surface water; cas=94-62-2; added Common Chemistry CAS names as altLabel: (2<em>E</em>,4<em>E</em>)-5-(1,3-Benzodioxol-5-yl)-1-(1-piperidinyl)-2,4-pentadien-1-one, (2E,4E)-5-(Benzo[<em>d</em>][1,3]dioxol-5-yl)-1-(piperidin-1-yl)penta-2,4-dien-1-one, (<em>E</em>,<em>E</em>)-1-[5-(1,3-Benzodioxol-5-yl)-2,4-pentadienoyl]piperidine, (<em>E</em>,<em>E</em>)-5-(3,4-Methylenedioxyphenyl)-2,4-pentadienoylpiperidide, 2,4-Pentadien-1-one, 5-(1,3-benzodioxol-5-yl)-1-(1-piperidinyl)-, (2<em>E</em>,4<em>E</em>)-, Bioperin, Bioperine, NSC 21727, Piperidine, 1-[(2<em>E</em>,4<em>E</em>)-5-(1,3-benzodioxol-5-yl)-1-oxo-2,4-pentadienyl]-, Piperidine, 1-[5-(1,3-benzodioxol-5-yl)-1-oxo-2,4-pentadienyl]-, (<em>E</em>,<em>E</em>)-, Piperidine, 1-piperoyl-, (<em>E</em>,<em>E</em>)-, Piperin; object_uuid=fo-5b9b2651c0fbdf17
270,766 consensus_match cas_match_labels {"94-62-2":"exactMatch"} group_key=piperine||dimension=Environmental > media=Water > water_body=Surface water; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'94-62-2': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-5b9b2651c0fbdf17: {'94-62-2': 'exactMatch'}
277,800 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C17H19NO3"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C17H19NO3"… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '1-[(2E,4E)-5-(1,3-benzodioxol-5-yl)-1-oxo-2,4-pentadienyl]piperidine'
284,501 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C17H19NO3"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C17H19NO3"… rdkit_post_consensus from 'O=C(/C=C/C=C/c1ccc2c(c1)OCO2)N1CCCCC1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
290,463 strip_catalogue_altlabels altLabel [{"@value":"(E,E)-1-piperoylpiperidine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAtt… [{"@value":"(E,E)-1-piperoylpiperidine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAtt… Removed 1 catalogue altLabel value(s): 'NSC 21727' (registry code)
379,254 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/f3f9f93c-c211-… associations resolved on the elementary layer
392,153 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C17H19NO3"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C17H19NO3"… typed the way the ontology types it
400,483 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
400,484 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C17H19NO3"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C17H19NO3"… the substance's answer, copied onto its flow

PROV-O trail

21 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T1554374006150000/15741 prefLabel ef:agent/bootstrap_labels ef:flow/f3f9f93c-c211-4457-b4d9-96265e3fae92/v0 ef:flow/f3f9f93c-c211-4457-b4d9-96265e3fae92/v1
ef:activity/change/20260821T1554374006150000/15742 name ef:agent/bootstrap_labels ef:flow/f3f9f93c-c211-4457-b4d9-96265e3fae92/v1 ef:flow/f3f9f93c-c211-4457-b4d9-96265e3fae92/v2
ef:activity/change/20260821T1554374006150000/15743 synonyms ef:agent/bootstrap_labels ef:flow/f3f9f93c-c211-4457-b4d9-96265e3fae92/v2 ef:flow/f3f9f93c-c211-4457-b4d9-96265e3fae92/v3
ef:activity/change/20260821T1554374006150000/196440 context ef:agent/default_context_mapping ef:flow/f3f9f93c-c211-4457-b4d9-96265e3fae92/v3 ef:flow/f3f9f93c-c211-4457-b4d9-96265e3fae92/v4
ef:activity/change/20260821T1554374006150000/196441 context_iri ef:agent/default_context_mapping ef:flow/f3f9f93c-c211-4457-b4d9-96265e3fae92/v4 ef:flow/f3f9f93c-c211-4457-b4d9-96265e3fae92/v5
ef:activity/change/20260821T1554374006150000/218514 unit_iri ef:agent/unit_normalization ef:flow/f3f9f93c-c211-4457-b4d9-96265e3fae92/v5 ef:flow/f3f9f93c-c211-4457-b4d9-96265e3fae92/v6
ef:activity/change/20260821T1554374006150000/224714 prefLabel ef:agent/normalize_name_case ef:flow/f3f9f93c-c211-4457-b4d9-96265e3fae92/v6 ef:flow/f3f9f93c-c211-4457-b4d9-96265e3fae92/v7
ef:activity/change/20260821T1554374006150000/242008 properties ef:agent/enrich_references ef:flow/f3f9f93c-c211-4457-b4d9-96265e3fae92/v7 ef:flow/f3f9f93c-c211-4457-b4d9-96265e3fae92/v8
ef:activity/change/20260821T1554374006150000/242009 skos_definition ef:agent/enrich_references ef:flow/f3f9f93c-c211-4457-b4d9-96265e3fae92/v8 ef:flow/f3f9f93c-c211-4457-b4d9-96265e3fae92/v9
ef:activity/change/20260821T1554374006150000/242010 references ef:agent/enrich_references ef:flow/f3f9f93c-c211-4457-b4d9-96265e3fae92/v9 ef:flow/f3f9f93c-c211-4457-b4d9-96265e3fae92/v10
ef:activity/change/20260821T1554374006150000/252593 properties ef:agent/rdkit_pre_consensus ef:flow/f3f9f93c-c211-4457-b4d9-96265e3fae92/v10 ef:flow/f3f9f93c-c211-4457-b4d9-96265e3fae92/v11
ef:activity/change/20260821T1554374006150000/256465 altLabel ef:agent/chebi_altlabels ef:flow/f3f9f93c-c211-4457-b4d9-96265e3fae92/v11 ef:flow/f3f9f93c-c211-4457-b4d9-96265e3fae92/v12
ef:activity/change/20260821T1554374006150000/270765 altLabel ef:agent/consensus_match ef:flow/f3f9f93c-c211-4457-b4d9-96265e3fae92/v12 ef:flow/f3f9f93c-c211-4457-b4d9-96265e3fae92/v13
ef:activity/change/20260821T1554374006150000/270766 cas_match_labels ef:agent/consensus_match ef:flow/f3f9f93c-c211-4457-b4d9-96265e3fae92/v13 ef:flow/f3f9f93c-c211-4457-b4d9-96265e3fae92/v14
ef:activity/change/20260821T1554374006150000/277800 properties ef:agent/opsin_iupac ef:flow/f3f9f93c-c211-4457-b4d9-96265e3fae92/v14 ef:flow/f3f9f93c-c211-4457-b4d9-96265e3fae92/v15
ef:activity/change/20260821T1554374006150000/284501 properties ef:agent/rdkit_post_consensus ef:flow/f3f9f93c-c211-4457-b4d9-96265e3fae92/v15 ef:flow/f3f9f93c-c211-4457-b4d9-96265e3fae92/v16
ef:activity/change/20260821T1554374006150000/290463 altLabel ef:agent/strip_catalogue_altlabels ef:flow/f3f9f93c-c211-4457-b4d9-96265e3fae92/v16 ef:flow/f3f9f93c-c211-4457-b4d9-96265e3fae92/v17
ef:activity/change/20260821T1554374006150000/379254 concept_associations ef:agent/carry_associations_onto_flows ef:flow/f3f9f93c-c211-4457-b4d9-96265e3fae92/v17 ef:flow/f3f9f93c-c211-4457-b4d9-96265e3fae92/v18
ef:activity/change/20260821T1554374006150000/392153 properties ef:agent/normalise_property_values ef:flow/f3f9f93c-c211-4457-b4d9-96265e3fae92/v18 ef:flow/f3f9f93c-c211-4457-b4d9-96265e3fae92/v19
ef:activity/change/20260821T1554374006150000/400483 types ef:agent/link_flows_to_their_substance ef:flow/f3f9f93c-c211-4457-b4d9-96265e3fae92/v19 ef:flow/f3f9f93c-c211-4457-b4d9-96265e3fae92/v20
ef:activity/change/20260821T1554374006150000/400484 properties ef:agent/link_flows_to_their_substance ef:flow/f3f9f93c-c211-4457-b4d9-96265e3fae92/v20 ef:flow/f3f9f93c-c211-4457-b4d9-96265e3fae92/v21

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