Picrotoxin
Everything that changed this flow. Back to the flow
f40c516d-29f2-4392-bf09-c700d0bef0be
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 4 | link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus | the substance's answer, copied onto its flow |
| altLabel | 3 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 1 catalogue altLabel value(s): 'NSC 403139' (registry code) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=picrotoxin||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'124-87-8': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-f0a0b273231ecf65: {'124-87-8': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['124-87-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_134126']; candidate_pubchem_cids=[4815, 31304, 518601, 5311359, 5458938, 6473767, 13104807, 44630180, 122130659, 124080966, 131704481, 131846146, 154731207, 169543674, 171378855, 176519983]; selected_pubchem_cids=[]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
19| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 15,300 | bootstrap_labels | prefLabel | — | [{"@value":"picrotoxin","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… | Bootstrapped prefLabel from legacy name field |
| 15,301 | bootstrap_labels | name | picrotoxin | — | Purged legacy name field to enforce prefLabel usage |
| 15,302 | bootstrap_labels | synonyms | ["3,6-Methano-8H-1,5,7-trioxacyclopenta(ij)cycloprop(a)azulene-4,8(3H)-dione, hexahydro-2a-hydroxy-9-(1-hydroxy-1-methy… | [] | Removed legacy synonyms field in favor of structured labels |
| 196,490 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Water","water_body":"Ocean"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water |
| 196,491 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-wate-ocea | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water |
| 218,375 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 224,617 | normalize_name_case | prefLabel | [{"@value":"picrotoxin","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… | [{"@value":"Picrotoxin","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 241,620 | enrich_references | skos_definition | — | [{"@value":"A mixture consisting of equimolar amounts of picrotoxinin and picrotin found in the climbing plant Anamirta… | Merged ChEBI/PubChem definitions into skos:definition |
| 241,621 | enrich_references | references | [] | [{"@id":"https://commonchemistry.cas.org/detail?cas_rn=124-87-8","provenance":{"prov:wasGeneratedBy":"enrich_references… | Added references with provenance; cas_numbers=['124-87-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_134126']; candidate_pubchem_cids=[4815, 31304, 518601, 5311359, 5458938, 6473767, 13104807, 44630180, 122130659, 124080966, 131704481, 131846146, 154731207, 169543674, 171378855, 176519983]; selected_pubchem_cids=[]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 256,409 | chebi_altlabels | altLabel | [] | [{"@value":"(1R,3R,5S,8S,9R,12S,13R,14R)-1-hydroxy-13-methyl-14-(prop-1-en-2-yl)-4,7,10-trioxapentacyclo[6.4.1.1(9,12).… | Added 6 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 270,747 | consensus_match | altLabel | [{"@value":"(1R,3R,5S,8S,9R,12S,13R,14R)-1-hydroxy-13-methyl-14-(prop-1-en-2-yl)-4,7,10-trioxapentacyclo[6.4.1.1(9,12).… | [{"@value":"(1R,3R,5S,8S,9R,12S,13R,14R)-1-hydroxy-13-methyl-14-(prop-1-en-2-yl)-4,7,10-trioxapentacyclo[6.4.1.1(9,12).… | group_key=picrotoxin||dimension=Environmental > media=Ground > geography=Agricultural; cas=124-87-8; added Common Chemistry CAS names as altLabel: 3,6-Methano-8<em>H</em>-1,5,7-trioxacyclopenta[<em>ij</em>]cycloprop[<em>a</em>]azulene-4,8(3<em>H</em>)-dione, hexahydro-2a-hydroxy-8b-methyl-9-(1-methylethenyl)-, (1a<em>R</em>,2a<em>R</em>,3<em>S</em>,6<em>R</em>,6a<em>S</em>,8a<em>S</em>,8b<em>R</em>,9<em>R</em>)-, compd. with (1a<em>R</em>,2a<em>R</em>,3<em>S</em>,6<em>R</em>,6a<em>S</em>,8a<em>S</em>,8b<em>R</em>,9<em>S</em>)-hexahydro-2a-hydroxy-9-(1-hydroxy-1-methylethyl)-8b-methyl-3,6-methano-8<em>H</em>-1,5,7-trioxacyclopenta[<em>ij</em>]cycloprop[<em>a</em>]azulene-4,8(3<em>H</em>)-dione (1:1), 3,6-Methano-8<em>H</em>-1,5,7-trioxacyclopenta[<em>ij</em>]cycloprop[<em>a</em>]azulene-4,8(3<em>H</em>)-dione, hexahydro-2a-hydroxy-8b-methyl-9-(1-methylethenyl)-, [1a<em>R</em>-(1aα,2aβ,3β,6β,6aβ,8a<em>S</em>*,8bβ,9<em>R</em>*)]-, compd. with [1a<em>R</em>-(1aα,2aβ,3β,6β,6aβ,8a<em>S</em>*,8bβ,9<em>S</em>*)]-hexahydro-2a-hydroxy-9-(1-hydroxy-1-methylethyl)-8b-methyl-3,6-methano-8<em>H</em>-1,5,7-trioxacyclopenta[<em>ij</em>]cycloprop[<em>a</em>]azulene-4,8(3<em>H</em>)-dione (1:1), 3,6-Methano-8<em>H</em>-1,5,7-trioxacyclopenta[<em>ij</em>]cycloprop[<em>a</em>]azulene-4,8(3<em>H</em>)-dione, hexahydro-2a-hydroxy-9-(1-hydroxy-1-methylethyl)-8b-methyl-, (1a<em>R</em>,2a<em>R</em>,3<em>S</em>,6<em>R</em>,6a<em>S</em>,8a<em>S</em>,8b<em>R</em>,9<em>S</em>)-, compd. with (1a<em>R</em>,2a<em>R</em>,3<em>S</em>,6<em>R</em>,6a<em>S</em>,8a<em>S</em>,8b<em>R</em>,9<em>R</em>)-hexahydro-2a-hydroxy-8b-methyl-9-(1-methylethenyl)-3,6-methano-8<em>H</em>-1,5,7-trioxacyclopenta[<em>ij</em>]cycloprop[<em>a</em>]azulene-4,8(3<em>H</em>)-dione (1:1), 3,6-Methano-8<em>H</em>-1,5,7-trioxacyclopenta[<em>ij</em>]cycloprop[<em>a</em>]azulene-4,8(3<em>H</em>)-dione, hexahydro-2a-hydroxy-9-(1-hydroxy-1-methylethyl)-8b-methyl-, [1a<em>R</em>-(1aα,2aβ,3β,6β,6aβ,8a<em>S</em>*,8bβ,9<em>S</em>*)]-, compd. with [1a<em>R</em>-(1aα,2aβ,3β,6β,6aβ,8a<em>S</em>*,8bβ,9<em>R</em>*)]-hexahydro-2a-hydroxy-8b-methyl-9-(1-methylethenyl)-3,6-methano-8<em>H</em>-1,5,7-trioxacyclopenta[<em>ij</em>]cycloprop[<em>a</em>]azulene-4,8(3<em>H</em>)-dione (1:1), Fish berry, MeSH ID: D010852, NSC 403139, Picrotoxinum; object_uuid=fo-f0a0b273231ecf65 |
| 270,748 | consensus_match | cas_match_labels | — | {"124-87-8":"exactMatch"} | group_key=picrotoxin||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'124-87-8': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-f0a0b273231ecf65: {'124-87-8': 'exactMatch'} |
| 277,674 | opsin_iupac | properties | {} | {"https://w3id.org/chemrof/IUPAC_name":{"@id":"https://w3id.org/chemrof/IUPAC_name","rdfs:label":"IUPAC name","@value":… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '3,6-Methano-8H-1,5,7-trioxacyclopenta[ij]cycloprop[a]azulene-4,8(3H)-dione, hexahydro-2a-hydroxy-8b-methyl-9-(1-methylethenyl)-, (1aR,2aR,3S,6R,6aS,8aS,8bR,9R)-, compd. with (1aR,2aR,3S,6R,6aS,8aS,8bR,9S)-hexahydro-2a-hydroxy-9-(1-hydroxy-1-methylethyl)-8b-methyl-3,6-methano-8H-1,5,7-trioxacyclopenta[ij]cycloprop[a]azulene-4,8(3H)-dione (1:1)' |
| 284,373 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/IUPAC_name":{"@id":"https://w3id.org/chemrof/IUPAC_name","rdfs:label":"IUPAC name","@value":… | {"https://w3id.org/chemrof/IUPAC_name":{"@id":"https://w3id.org/chemrof/IUPAC_name","rdfs:label":"IUPAC name","@value":… | rdkit_post_consensus from 'C=C(C)[C@@H]1[C@H]2OC(=O)[C@@H]1[C@]1(O)C[C@H]3O[C@]34C(=O)O[C@H]2[C@]14C.CC(C)(O)[C@@H]1[C@H]2OC(=O)[C@@H]1[C@]1(O)C[C@H]3O[C@]34C(=O)O[C@H]2[C@]14C'; added: inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass; confirmed: smiles_string, inchi2d_string |
| 290,374 | strip_catalogue_altlabels | altLabel | [{"@value":"(1R,3R,5S,8S,9R,12S,13R,14R)-1-hydroxy-13-methyl-14-(prop-1-en-2-yl)-4,7,10-trioxapentacyclo[6.4.1.1(9,12).… | [{"@value":"(1R,3R,5S,8S,9R,12S,13R,14R)-1-hydroxy-13-methyl-14-(prop-1-en-2-yl)-4,7,10-trioxapentacyclo[6.4.1.1(9,12).… | Removed 1 catalogue altLabel value(s): 'NSC 403139' (registry code) |
| 379,279 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/f40c516d-29f2-… | associations resolved on the elementary layer |
| 392,028 | normalise_property_values | properties | {"https://w3id.org/chemrof/IUPAC_name":{"@id":"https://w3id.org/chemrof/IUPAC_name","rdfs:label":"IUPAC name","@value":… | {"https://w3id.org/chemrof/IUPAC_name":{"@id":"https://w3id.org/chemrof/IUPAC_name","rdfs:label":"IUPAC name","@value":… | typed the way the ontology types it |
| 400,315 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/MolecularComplex"] | the substance's answer, copied onto its flow |
| 400,316 | link_flows_to_their_substance | properties | {"https://w3id.org/chemrof/IUPAC_name":{"@id":"https://w3id.org/chemrof/IUPAC_name","rdfs:label":"IUPAC name","@value":… | {"https://w3id.org/chemrof/IUPAC_name":{"@id":"https://w3id.org/chemrof/IUPAC_name","rdfs:label":"IUPAC name","@value":… | the substance's answer, copied onto its flow |
PROV-O trail
19 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260821T1554374006150000/15300 | prefLabel | ef:agent/bootstrap_labels | ef:flow/f40c516d-29f2-4392-bf09-c700d0bef0be/v0 | ef:flow/f40c516d-29f2-4392-bf09-c700d0bef0be/v1 |
| ef:activity/change/20260821T1554374006150000/15301 | name | ef:agent/bootstrap_labels | ef:flow/f40c516d-29f2-4392-bf09-c700d0bef0be/v1 | ef:flow/f40c516d-29f2-4392-bf09-c700d0bef0be/v2 |
| ef:activity/change/20260821T1554374006150000/15302 | synonyms | ef:agent/bootstrap_labels | ef:flow/f40c516d-29f2-4392-bf09-c700d0bef0be/v2 | ef:flow/f40c516d-29f2-4392-bf09-c700d0bef0be/v3 |
| ef:activity/change/20260821T1554374006150000/196490 | context | ef:agent/default_context_mapping | ef:flow/f40c516d-29f2-4392-bf09-c700d0bef0be/v3 | ef:flow/f40c516d-29f2-4392-bf09-c700d0bef0be/v4 |
| ef:activity/change/20260821T1554374006150000/196491 | context_iri | ef:agent/default_context_mapping | ef:flow/f40c516d-29f2-4392-bf09-c700d0bef0be/v4 | ef:flow/f40c516d-29f2-4392-bf09-c700d0bef0be/v5 |
| ef:activity/change/20260821T1554374006150000/218375 | unit_iri | ef:agent/unit_normalization | ef:flow/f40c516d-29f2-4392-bf09-c700d0bef0be/v5 | ef:flow/f40c516d-29f2-4392-bf09-c700d0bef0be/v6 |
| ef:activity/change/20260821T1554374006150000/224617 | prefLabel | ef:agent/normalize_name_case | ef:flow/f40c516d-29f2-4392-bf09-c700d0bef0be/v6 | ef:flow/f40c516d-29f2-4392-bf09-c700d0bef0be/v7 |
| ef:activity/change/20260821T1554374006150000/241620 | skos_definition | ef:agent/enrich_references | ef:flow/f40c516d-29f2-4392-bf09-c700d0bef0be/v7 | ef:flow/f40c516d-29f2-4392-bf09-c700d0bef0be/v8 |
| ef:activity/change/20260821T1554374006150000/241621 | references | ef:agent/enrich_references | ef:flow/f40c516d-29f2-4392-bf09-c700d0bef0be/v8 | ef:flow/f40c516d-29f2-4392-bf09-c700d0bef0be/v9 |
| ef:activity/change/20260821T1554374006150000/256409 | altLabel | ef:agent/chebi_altlabels | ef:flow/f40c516d-29f2-4392-bf09-c700d0bef0be/v9 | ef:flow/f40c516d-29f2-4392-bf09-c700d0bef0be/v10 |
| ef:activity/change/20260821T1554374006150000/270747 | altLabel | ef:agent/consensus_match | ef:flow/f40c516d-29f2-4392-bf09-c700d0bef0be/v10 | ef:flow/f40c516d-29f2-4392-bf09-c700d0bef0be/v11 |
| ef:activity/change/20260821T1554374006150000/270748 | cas_match_labels | ef:agent/consensus_match | ef:flow/f40c516d-29f2-4392-bf09-c700d0bef0be/v11 | ef:flow/f40c516d-29f2-4392-bf09-c700d0bef0be/v12 |
| ef:activity/change/20260821T1554374006150000/277674 | properties | ef:agent/opsin_iupac | ef:flow/f40c516d-29f2-4392-bf09-c700d0bef0be/v12 | ef:flow/f40c516d-29f2-4392-bf09-c700d0bef0be/v13 |
| ef:activity/change/20260821T1554374006150000/284373 | properties | ef:agent/rdkit_post_consensus | ef:flow/f40c516d-29f2-4392-bf09-c700d0bef0be/v13 | ef:flow/f40c516d-29f2-4392-bf09-c700d0bef0be/v14 |
| ef:activity/change/20260821T1554374006150000/290374 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/f40c516d-29f2-4392-bf09-c700d0bef0be/v14 | ef:flow/f40c516d-29f2-4392-bf09-c700d0bef0be/v15 |
| ef:activity/change/20260821T1554374006150000/379279 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/f40c516d-29f2-4392-bf09-c700d0bef0be/v15 | ef:flow/f40c516d-29f2-4392-bf09-c700d0bef0be/v16 |
| ef:activity/change/20260821T1554374006150000/392028 | properties | ef:agent/normalise_property_values | ef:flow/f40c516d-29f2-4392-bf09-c700d0bef0be/v16 | ef:flow/f40c516d-29f2-4392-bf09-c700d0bef0be/v17 |
| ef:activity/change/20260821T1554374006150000/400315 | types | ef:agent/link_flows_to_their_substance | ef:flow/f40c516d-29f2-4392-bf09-c700d0bef0be/v17 | ef:flow/f40c516d-29f2-4392-bf09-c700d0bef0be/v18 |
| ef:activity/change/20260821T1554374006150000/400316 | properties | ef:agent/link_flows_to_their_substance | ef:flow/f40c516d-29f2-4392-bf09-c700d0bef0be/v18 | ef:flow/f40c516d-29f2-4392-bf09-c700d0bef0be/v19 |