Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 6 enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus the substance's answer, copied onto its flow
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 2 catalogue altLabel value(s): 'NSC 203450' (registry code), 'NSC 7914' (registry code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=l-argininehydrochloride||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'1119-34-2': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-bd5800ef086e33a8: {'1119-34-2': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['1119-34-2']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_31235']; candidate_pubchem_cids=[232, 6322, 66250, 71070, 85880, 16218888, 88355162]; selected_pubchem_cids=[66250]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

21
# Step Field From To Why
1,556 bootstrap_labels prefLabel [{"@value":"l-arginine hydrochloride","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttr… Bootstrapped prefLabel from legacy name field
1,557 bootstrap_labels name l-arginine hydrochloride Purged legacy name field to enforce prefLabel usage
1,558 bootstrap_labels synonyms ["organic","(+)-l-argininehydrochloride","l-argininehydrochloride","l-argininemonohydrochloride","l-arginine-hcl"] [] Removed legacy synonyms field in favor of structured labels
197,044 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Non-agricultural"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
197,045 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-noag Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
213,862 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
221,454 normalize_name_case prefLabel [{"@value":"l-arginine hydrochloride","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttr… [{"@value":"L-arginine Hydrochloride","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttr… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
228,684 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H14N4O2.… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
228,685 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
228,686 enrich_references references [] [{"@id":"https://chem.echa.europa.eu/100.012.978","provenance":{"prov:wasGeneratedBy":"enrich_references.pubchem_identi… Added references with provenance; cas_numbers=['1119-34-2']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_31235']; candidate_pubchem_cids=[232, 6322, 66250, 71070, 85880, 16218888, 88355162]; selected_pubchem_cids=[66250]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
248,755 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H14N4O2.… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H14N4O2.… rdkit_pre_consensus from 'C(CC(C(=O)O)N)CN=C(N)N.Cl'; added: inchi2d_string, monoisotopic_mass
254,567 chebi_altlabels altLabel [] [{"@value":"Arginine hydrochloride","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribu… Added 1 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
268,304 consensus_match altLabel [{"@value":"Arginine hydrochloride","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribu… [{"@value":"Arginine hydrochloride","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribu… group_key=l-argininehydrochloride||dimension=Environmental > media=Ground > geography=Agricultural; cas=1119-34-2; added Common Chemistry CAS names as altLabel: <span class="text-smallcaps">L</span>-(+)-Arginine hydrochloride, <span class="text-smallcaps">L</span>-(+)-Arginine monohydrochloride, <span class="text-smallcaps">L</span>-Arginine, hydrochloride (1:1), <span class="text-smallcaps">L</span>-Arginine, monohydrochloride, Argamine, Arginine monochloride, Arginine monohydrochloride, Arginine, monohydrochloride, <span class="text-smallcaps">L</span>-, Argivene, Detoxargin, Levargin, Minophagen A, NSC 203450, NSC 7914, R-Gene, Tivortin; object_uuid=fo-bd5800ef086e33a8
268,305 consensus_match cas_match_labels {"1119-34-2":"exactMatch"} group_key=l-argininehydrochloride||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'1119-34-2': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-bd5800ef086e33a8: {'1119-34-2': 'exactMatch'}
273,894 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H14N4O2.… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H14N4O2.… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'L-arginine Hydrochloride'
280,284 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H14N4O2.… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H14N4O2.… rdkit_post_consensus from 'Cl.N=C(N)NCCC[C@H](N)C(=O)O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
287,588 strip_catalogue_altlabels altLabel [{"@value":"Arginine hydrochloride","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribu… [{"@value":"Arginine hydrochloride","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribu… Removed 2 catalogue altLabel value(s): 'NSC 203450' (registry code), 'NSC 7914' (registry code)
379,578 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/f4fa1cb1-2ddd-… associations resolved on the elementary layer
388,183 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H14N4O2.… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H14N4O2.… typed the way the ontology types it
394,802 link_flows_to_their_substance types ["https://w3id.org/chemrof/MolecularComplex"] the substance's answer, copied onto its flow
394,803 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H14N4O2.… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H14N4O2.… the substance's answer, copied onto its flow

PROV-O trail

21 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T1555490862250000/1556 prefLabel ef:agent/bootstrap_labels ef:flow/f4fa1cb1-2ddd-40d5-ab94-ff215c8ca4a3/v0 ef:flow/f4fa1cb1-2ddd-40d5-ab94-ff215c8ca4a3/v1
ef:activity/change/20260820T1555490862250000/1557 name ef:agent/bootstrap_labels ef:flow/f4fa1cb1-2ddd-40d5-ab94-ff215c8ca4a3/v1 ef:flow/f4fa1cb1-2ddd-40d5-ab94-ff215c8ca4a3/v2
ef:activity/change/20260820T1555490862250000/1558 synonyms ef:agent/bootstrap_labels ef:flow/f4fa1cb1-2ddd-40d5-ab94-ff215c8ca4a3/v2 ef:flow/f4fa1cb1-2ddd-40d5-ab94-ff215c8ca4a3/v3
ef:activity/change/20260820T1555490862250000/197044 context ef:agent/default_context_mapping ef:flow/f4fa1cb1-2ddd-40d5-ab94-ff215c8ca4a3/v3 ef:flow/f4fa1cb1-2ddd-40d5-ab94-ff215c8ca4a3/v4
ef:activity/change/20260820T1555490862250000/197045 context_iri ef:agent/default_context_mapping ef:flow/f4fa1cb1-2ddd-40d5-ab94-ff215c8ca4a3/v4 ef:flow/f4fa1cb1-2ddd-40d5-ab94-ff215c8ca4a3/v5
ef:activity/change/20260820T1555490862250000/213862 unit_iri ef:agent/unit_normalization ef:flow/f4fa1cb1-2ddd-40d5-ab94-ff215c8ca4a3/v5 ef:flow/f4fa1cb1-2ddd-40d5-ab94-ff215c8ca4a3/v6
ef:activity/change/20260820T1555490862250000/221454 prefLabel ef:agent/normalize_name_case ef:flow/f4fa1cb1-2ddd-40d5-ab94-ff215c8ca4a3/v6 ef:flow/f4fa1cb1-2ddd-40d5-ab94-ff215c8ca4a3/v7
ef:activity/change/20260820T1555490862250000/228684 properties ef:agent/enrich_references ef:flow/f4fa1cb1-2ddd-40d5-ab94-ff215c8ca4a3/v7 ef:flow/f4fa1cb1-2ddd-40d5-ab94-ff215c8ca4a3/v8
ef:activity/change/20260820T1555490862250000/228685 skos_definition ef:agent/enrich_references ef:flow/f4fa1cb1-2ddd-40d5-ab94-ff215c8ca4a3/v8 ef:flow/f4fa1cb1-2ddd-40d5-ab94-ff215c8ca4a3/v9
ef:activity/change/20260820T1555490862250000/228686 references ef:agent/enrich_references ef:flow/f4fa1cb1-2ddd-40d5-ab94-ff215c8ca4a3/v9 ef:flow/f4fa1cb1-2ddd-40d5-ab94-ff215c8ca4a3/v10
ef:activity/change/20260820T1555490862250000/248755 properties ef:agent/rdkit_pre_consensus ef:flow/f4fa1cb1-2ddd-40d5-ab94-ff215c8ca4a3/v10 ef:flow/f4fa1cb1-2ddd-40d5-ab94-ff215c8ca4a3/v11
ef:activity/change/20260820T1555490862250000/254567 altLabel ef:agent/chebi_altlabels ef:flow/f4fa1cb1-2ddd-40d5-ab94-ff215c8ca4a3/v11 ef:flow/f4fa1cb1-2ddd-40d5-ab94-ff215c8ca4a3/v12
ef:activity/change/20260820T1555490862250000/268304 altLabel ef:agent/consensus_match ef:flow/f4fa1cb1-2ddd-40d5-ab94-ff215c8ca4a3/v12 ef:flow/f4fa1cb1-2ddd-40d5-ab94-ff215c8ca4a3/v13
ef:activity/change/20260820T1555490862250000/268305 cas_match_labels ef:agent/consensus_match ef:flow/f4fa1cb1-2ddd-40d5-ab94-ff215c8ca4a3/v13 ef:flow/f4fa1cb1-2ddd-40d5-ab94-ff215c8ca4a3/v14
ef:activity/change/20260820T1555490862250000/273894 properties ef:agent/opsin_iupac ef:flow/f4fa1cb1-2ddd-40d5-ab94-ff215c8ca4a3/v14 ef:flow/f4fa1cb1-2ddd-40d5-ab94-ff215c8ca4a3/v15
ef:activity/change/20260820T1555490862250000/280284 properties ef:agent/rdkit_post_consensus ef:flow/f4fa1cb1-2ddd-40d5-ab94-ff215c8ca4a3/v15 ef:flow/f4fa1cb1-2ddd-40d5-ab94-ff215c8ca4a3/v16
ef:activity/change/20260820T1555490862250000/287588 altLabel ef:agent/strip_catalogue_altlabels ef:flow/f4fa1cb1-2ddd-40d5-ab94-ff215c8ca4a3/v16 ef:flow/f4fa1cb1-2ddd-40d5-ab94-ff215c8ca4a3/v17
ef:activity/change/20260820T1555490862250000/379578 concept_associations ef:agent/carry_associations_onto_flows ef:flow/f4fa1cb1-2ddd-40d5-ab94-ff215c8ca4a3/v17 ef:flow/f4fa1cb1-2ddd-40d5-ab94-ff215c8ca4a3/v18
ef:activity/change/20260820T1555490862250000/388183 properties ef:agent/normalise_property_values ef:flow/f4fa1cb1-2ddd-40d5-ab94-ff215c8ca4a3/v18 ef:flow/f4fa1cb1-2ddd-40d5-ab94-ff215c8ca4a3/v19
ef:activity/change/20260820T1555490862250000/394802 types ef:agent/link_flows_to_their_substance ef:flow/f4fa1cb1-2ddd-40d5-ab94-ff215c8ca4a3/v19 ef:flow/f4fa1cb1-2ddd-40d5-ab94-ff215c8ca4a3/v20
ef:activity/change/20260820T1555490862250000/394803 properties ef:agent/link_flows_to_their_substance ef:flow/f4fa1cb1-2ddd-40d5-ab94-ff215c8ca4a3/v20 ef:flow/f4fa1cb1-2ddd-40d5-ab94-ff215c8ca4a3/v21

Keyboard

?
Show or hide this map
Esc
Close

More as the sections are built.