Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 6 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus, withhold_ambiguous_mass typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 4 catalogue altLabel value(s): 'C.I. 42085' (registry code), 'Japan Green 402' (trade name), 'NSC 5016' (registry code), 'NSC 8684' (registry code)
prefLabel 3 bootstrap_labels, normalize_name_case, substance_label_v1 the substance's name: C.I. Acid Green 3
cas_match_labels 1 consensus_match group_key=c.i.acidgreen3||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'4680-78-8': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-776cdd736c9fb2dc: {'4680-78-8': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['4680-78-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_82471', 'http://purl.obolibrary.org/obo/CHEBI_90112']; candidate_pubchem_cids=[20803, 20804, 73226, 53297430, 56840821, 131854138, 170924137]; selected_pubchem_cids=[20803]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

22
# Step Field From To Why
25,753 bootstrap_labels prefLabel [{"@value":"c.i. acid green 3","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedT… Bootstrapped prefLabel from legacy name field
25,754 bootstrap_labels name c.i. acid green 3 Purged legacy name field to enforce prefLabel usage
25,755 bootstrap_labels synonyms ["hydrogen(ethyl)[4-[î±-[4-[ethyl(3-sulphonatobenzyl)amino]phenyl]benzylidene]cyclohexa-2,5-dien-1-ylidene](3-sulphonat… [] Removed legacy synonyms field in favor of structured labels
197,238 default_context_mapping context {"dimension":"Environmental","media":"Air","indoor":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
197,239 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-indr-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
216,274 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
226,641 normalize_name_case prefLabel [{"@value":"c.i. acid green 3","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedT… [{"@value":"C.i. Acid Green 3","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedT… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
235,617 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C37H35N2Na… Added ChEBI/PubChem properties (chebi_ids=2, pubchem_cids=1)
235,618 enrich_references skos_definition [{"@value":"An organic sodium salt having 3-[(ethyl{4-[(4-{ethyl[(3-sulfonatophenyl)methyl]amino}phenyl)(phenyl)methyli… Merged ChEBI/PubChem definitions into skos:definition
235,619 enrich_references references [] [{"@id":"https://chem.echa.europa.eu/100.022.847","provenance":{"prov:wasGeneratedBy":"enrich_references.pubchem_identi… Added references with provenance; cas_numbers=['4680-78-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_82471', 'http://purl.obolibrary.org/obo/CHEBI_90112']; candidate_pubchem_cids=[20803, 20804, 73226, 53297430, 56840821, 131854138, 170924137]; selected_pubchem_cids=[20803]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
250,744 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C37H35N2Na… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C37H35N2Na… rdkit_pre_consensus from 'CCN(CC1=CC(=CC=C1)S(=O)(=O)[O-])C2=CC=C(C=C2)C(=C3C=CC(=[N+](CC)CC4=CC(=CC=C4)S(=O)(=O)[O-])C=C3)C5=CC=CC=C5.[Na+]'; added: monoisotopic_mass
255,634 chebi_altlabels altLabel [] [{"@value":"Acid green 3","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"co… Added 10 ChEBI synonym(s) as altLabel from 2 linked ChEBI record(s)
264,648 consensus_match altLabel [{"@value":"Acid green 3","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"co… [{"@value":"Acid green 3","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"co… group_key=c.i.acidgreen3||dimension=Environmental > media=Air > strata=Unknown; cas=4680-78-8; added Common Chemistry CAS names as altLabel: 4-[4-(<em>N</em>-Ethyl-<em>p</em>-sulfobenzylamino)diphenylmethylene]-[1-(<em>N</em>-ethyl-<em>N</em>-<em>p</em>-sulfoniumbenzyl)-Δ<sup>2,5</sup>-cyclohexadienimine] monosodium salt, A.F. Green No. 1, Acid Green, Acid Green 2G, Acid Green B, Acid Green G, Acid Green G (Polish), Acid Green S, Acid Leather Green 3G, Acid Leather Green F, Acidal Green G, Acilan Green B, Amacid Green B, Benzenemethanaminium, <em>N</em>-ethyl-<em>N</em>-[4-[[4-[ethyl[(3-sulfophenyl)methyl]amino]phenyl]phenylmethylene]-2,5-cyclohexadien-1-ylidene]-3-sulfo-, hydroxide, inner salt, sodium salt, Benzenemethanaminium, <em>N</em>-ethyl-<em>N</em>-[4-[[4-[ethyl[(3-sulfophenyl)methyl]amino]phenyl]phenylmethylene]-2,5-cyclohexadien-1-ylidene]-3-sulfo-, inner salt, sodium salt, Benzenemethanaminium, <em>N</em>-ethyl-<em>N</em>-[4-[[4-[ethyl[(3-sulfophenyl)methyl]amino]phenyl]phenylmethylene]-2,5-cyclohexadien-1-ylidene]-3-sulfo-, inner salt, sodium salt (1:1), Brilliant Green 3EMBL, Bucacid Guinea Green BA, Calcocid Green G, FD&amp;C Green No. 1, Fenazo Green L, Guinea Green BA, Guinea green, Hidacid Emerald Green, Hispacid Green GB, Japan Green 1, Japan Green 402, Japan Green No. 1, Japan Green No. 402, Kiton Green F, Kiton Green FC, Leather Green B, Merantine Green G, NSC 5016, NSC 8684, Naphthalene Green G, Naphthalene Lake Green G, Naphthalene Leather Green G, Neran Brilliant Green G, Pontacyl Green B, Pontacyl Green BL, Sulpho Green 2B, Triacid Green G, Vondacid Green L; object_uuid=fo-776cdd736c9fb2dc
264,649 consensus_match cas_match_labels {"4680-78-8":"exactMatch"} group_key=c.i.acidgreen3||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'4680-78-8': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-776cdd736c9fb2dc: {'4680-78-8': 'exactMatch'}
275,915 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C37H35N2Na… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C37H35N2Na… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'sodium 3-[(ethyl{4-[(4-{ethyl[(3-sulfonatophenyl)methyl]amino}phenyl)(phenyl)methylidene]cyclohexa-2,5-dien-1-ylidene}azaniumyl)methyl]benzene-1-sulfonate'
282,483 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C37H35N2Na… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C37H35N2Na… rdkit_post_consensus from 'CCN(Cc1cccc(S(=O)(=O)[O-])c1)c1ccc(C(=C2C=CC(=[N+](CC)Cc3cccc(S(=O)(=O)[O-])c3)C=C2)c2ccccc2)cc1.[Na+]'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
286,897 withhold_ambiguous_mass properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C37H35N2Na… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C37H35N2Na… withhold_ambiguous_mass: removed molecular_mass, monoisotopic_mass; the flow carries 2 candidate structures, so no one mass describes it
289,090 strip_catalogue_altlabels altLabel [{"@value":"Acid green 3","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"co… [{"@value":"Acid green 3","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"co… Removed 4 catalogue altLabel value(s): 'C.I. 42085' (registry code), 'Japan Green 402' (trade name), 'NSC 5016' (registry code), 'NSC 8684' (registry code)
379,653 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/f54bf9a5-7df9-… associations resolved on the elementary layer
390,262 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C37H35N2Na… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C37H35N2Na… typed the way the ontology types it
397,794 link_flows_to_their_substance types ["https://w3id.org/chemrof/ChemicalSalt"] the substance's answer, copied onto its flow
404,396 substance_label_v1 prefLabel [{"@value":"C.i. Acid Green 3","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedT… [{"@value":"C.I. Acid Green 3","@language":"en","@lang":"en","source":{"prov:wasGeneratedBy":"substance_label_v1","prov… the substance's name: C.I. Acid Green 3

PROV-O trail

22 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T1554374006150000/25753 prefLabel ef:agent/bootstrap_labels ef:flow/f54bf9a5-7df9-41fb-8a64-b6df0c4f5550/v0 ef:flow/f54bf9a5-7df9-41fb-8a64-b6df0c4f5550/v1
ef:activity/change/20260821T1554374006150000/25754 name ef:agent/bootstrap_labels ef:flow/f54bf9a5-7df9-41fb-8a64-b6df0c4f5550/v1 ef:flow/f54bf9a5-7df9-41fb-8a64-b6df0c4f5550/v2
ef:activity/change/20260821T1554374006150000/25755 synonyms ef:agent/bootstrap_labels ef:flow/f54bf9a5-7df9-41fb-8a64-b6df0c4f5550/v2 ef:flow/f54bf9a5-7df9-41fb-8a64-b6df0c4f5550/v3
ef:activity/change/20260821T1554374006150000/197238 context ef:agent/default_context_mapping ef:flow/f54bf9a5-7df9-41fb-8a64-b6df0c4f5550/v3 ef:flow/f54bf9a5-7df9-41fb-8a64-b6df0c4f5550/v4
ef:activity/change/20260821T1554374006150000/197239 context_iri ef:agent/default_context_mapping ef:flow/f54bf9a5-7df9-41fb-8a64-b6df0c4f5550/v4 ef:flow/f54bf9a5-7df9-41fb-8a64-b6df0c4f5550/v5
ef:activity/change/20260821T1554374006150000/216274 unit_iri ef:agent/unit_normalization ef:flow/f54bf9a5-7df9-41fb-8a64-b6df0c4f5550/v5 ef:flow/f54bf9a5-7df9-41fb-8a64-b6df0c4f5550/v6
ef:activity/change/20260821T1554374006150000/226641 prefLabel ef:agent/normalize_name_case ef:flow/f54bf9a5-7df9-41fb-8a64-b6df0c4f5550/v6 ef:flow/f54bf9a5-7df9-41fb-8a64-b6df0c4f5550/v7
ef:activity/change/20260821T1554374006150000/235617 properties ef:agent/enrich_references ef:flow/f54bf9a5-7df9-41fb-8a64-b6df0c4f5550/v7 ef:flow/f54bf9a5-7df9-41fb-8a64-b6df0c4f5550/v8
ef:activity/change/20260821T1554374006150000/235618 skos_definition ef:agent/enrich_references ef:flow/f54bf9a5-7df9-41fb-8a64-b6df0c4f5550/v8 ef:flow/f54bf9a5-7df9-41fb-8a64-b6df0c4f5550/v9
ef:activity/change/20260821T1554374006150000/235619 references ef:agent/enrich_references ef:flow/f54bf9a5-7df9-41fb-8a64-b6df0c4f5550/v9 ef:flow/f54bf9a5-7df9-41fb-8a64-b6df0c4f5550/v10
ef:activity/change/20260821T1554374006150000/250744 properties ef:agent/rdkit_pre_consensus ef:flow/f54bf9a5-7df9-41fb-8a64-b6df0c4f5550/v10 ef:flow/f54bf9a5-7df9-41fb-8a64-b6df0c4f5550/v11
ef:activity/change/20260821T1554374006150000/255634 altLabel ef:agent/chebi_altlabels ef:flow/f54bf9a5-7df9-41fb-8a64-b6df0c4f5550/v11 ef:flow/f54bf9a5-7df9-41fb-8a64-b6df0c4f5550/v12
ef:activity/change/20260821T1554374006150000/264648 altLabel ef:agent/consensus_match ef:flow/f54bf9a5-7df9-41fb-8a64-b6df0c4f5550/v12 ef:flow/f54bf9a5-7df9-41fb-8a64-b6df0c4f5550/v13
ef:activity/change/20260821T1554374006150000/264649 cas_match_labels ef:agent/consensus_match ef:flow/f54bf9a5-7df9-41fb-8a64-b6df0c4f5550/v13 ef:flow/f54bf9a5-7df9-41fb-8a64-b6df0c4f5550/v14
ef:activity/change/20260821T1554374006150000/275915 properties ef:agent/opsin_iupac ef:flow/f54bf9a5-7df9-41fb-8a64-b6df0c4f5550/v14 ef:flow/f54bf9a5-7df9-41fb-8a64-b6df0c4f5550/v15
ef:activity/change/20260821T1554374006150000/282483 properties ef:agent/rdkit_post_consensus ef:flow/f54bf9a5-7df9-41fb-8a64-b6df0c4f5550/v15 ef:flow/f54bf9a5-7df9-41fb-8a64-b6df0c4f5550/v16
ef:activity/change/20260821T1554374006150000/286897 properties ef:agent/withhold_ambiguous_mass ef:flow/f54bf9a5-7df9-41fb-8a64-b6df0c4f5550/v16 ef:flow/f54bf9a5-7df9-41fb-8a64-b6df0c4f5550/v17
ef:activity/change/20260821T1554374006150000/289090 altLabel ef:agent/strip_catalogue_altlabels ef:flow/f54bf9a5-7df9-41fb-8a64-b6df0c4f5550/v17 ef:flow/f54bf9a5-7df9-41fb-8a64-b6df0c4f5550/v18
ef:activity/change/20260821T1554374006150000/379653 concept_associations ef:agent/carry_associations_onto_flows ef:flow/f54bf9a5-7df9-41fb-8a64-b6df0c4f5550/v18 ef:flow/f54bf9a5-7df9-41fb-8a64-b6df0c4f5550/v19
ef:activity/change/20260821T1554374006150000/390262 properties ef:agent/normalise_property_values ef:flow/f54bf9a5-7df9-41fb-8a64-b6df0c4f5550/v19 ef:flow/f54bf9a5-7df9-41fb-8a64-b6df0c4f5550/v20
ef:activity/change/20260821T1554374006150000/397794 types ef:agent/link_flows_to_their_substance ef:flow/f54bf9a5-7df9-41fb-8a64-b6df0c4f5550/v20 ef:flow/f54bf9a5-7df9-41fb-8a64-b6df0c4f5550/v21
ef:activity/change/20260821T1554374006150000/404396 prefLabel ef:agent/substance_label_v1 ef:flow/f54bf9a5-7df9-41fb-8a64-b6df0c4f5550/v21 ef:flow/f54bf9a5-7df9-41fb-8a64-b6df0c4f5550/v22

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