Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 4 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 1 catalogue altLabel value(s): 'NSC 66991' (registry code)
cas_match_labels 1 consensus_match group_key=1,3-dimethylnaphthalene||dimension=Environmental > media=Water > water_body=Surface water; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'575-41-7': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-c2cdd5813caa1a35: {'575-41-7': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
prefLabel 1 bootstrap_labels Bootstrapped prefLabel from legacy name field
references 1 enrich_references Added references with provenance; cas_numbers=['575-41-7']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_48614']; candidate_pubchem_cids=[11327]; selected_pubchem_cids=[11327]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

18
# Step Field From To Why
17,558 bootstrap_labels prefLabel [{"@value":"1,3-dimethylnaphthalene","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttri… Bootstrapped prefLabel from legacy name field
17,559 bootstrap_labels name 1,3-dimethylnaphthalene Purged legacy name field to enforce prefLabel usage
17,560 bootstrap_labels synonyms ["1,3-DMN","AC1L1X4A","Naphthalene, 1,3-dimethyl-"] [] Removed legacy synonyms field in favor of structured labels
197,378 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Non-agricultural"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
197,379 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-noag Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
219,091 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
243,630 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H12"],"… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
243,631 enrich_references skos_definition [{"@value":"A dimethylnaphthalene carrying methyl groups at positions 1 and 3.","@language":"en","provenance":{"prov:wa… Merged ChEBI/PubChem definitions into skos:definition
243,632 enrich_references references [] [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J1.624A","provenance":{"prov:wasGeneratedBy":"enrich_reference… Added references with provenance; cas_numbers=['575-41-7']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_48614']; candidate_pubchem_cids=[11327]; selected_pubchem_cids=[11327]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
256,688 chebi_altlabels altLabel [] [{"@value":"1,3-DMN","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… Added 1 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
258,594 consensus_match altLabel [{"@value":"1,3-DMN","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… [{"@value":"1,3-DMN","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… group_key=1,3-dimethylnaphthalene||dimension=Environmental > media=Water > water_body=Surface water; cas=575-41-7; added Common Chemistry CAS names as altLabel: NSC 66991, Naphthalene, 1,3-dimethyl-; object_uuid=fo-c2cdd5813caa1a35
258,595 consensus_match cas_match_labels {"575-41-7":"exactMatch"} group_key=1,3-dimethylnaphthalene||dimension=Environmental > media=Water > water_body=Surface water; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'575-41-7': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-c2cdd5813caa1a35: {'575-41-7': 'exactMatch'}
278,256 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H12"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H12"],"… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '1,3-dimethylnaphthalene'
285,002 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H12"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H12"],"… rdkit_post_consensus from 'Cc1cc(C)c2ccccc2c1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
290,796 strip_catalogue_altlabels altLabel [{"@value":"1,3-DMN","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… [{"@value":"1,3-DMN","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… Removed 1 catalogue altLabel value(s): 'NSC 66991' (registry code)
379,716 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/f594a013-5bf6-… associations resolved on the elementary layer
392,607 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H12"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H12"],"… typed the way the ontology types it
401,165 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

18 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T1812399309960000/17558 prefLabel ef:agent/bootstrap_labels ef:flow/f594a013-5bf6-4739-bf62-803d874a2dc5/v0 ef:flow/f594a013-5bf6-4739-bf62-803d874a2dc5/v1
ef:activity/change/20260820T1812399309960000/17559 name ef:agent/bootstrap_labels ef:flow/f594a013-5bf6-4739-bf62-803d874a2dc5/v1 ef:flow/f594a013-5bf6-4739-bf62-803d874a2dc5/v2
ef:activity/change/20260820T1812399309960000/17560 synonyms ef:agent/bootstrap_labels ef:flow/f594a013-5bf6-4739-bf62-803d874a2dc5/v2 ef:flow/f594a013-5bf6-4739-bf62-803d874a2dc5/v3
ef:activity/change/20260820T1812399309960000/197378 context ef:agent/default_context_mapping ef:flow/f594a013-5bf6-4739-bf62-803d874a2dc5/v3 ef:flow/f594a013-5bf6-4739-bf62-803d874a2dc5/v4
ef:activity/change/20260820T1812399309960000/197379 context_iri ef:agent/default_context_mapping ef:flow/f594a013-5bf6-4739-bf62-803d874a2dc5/v4 ef:flow/f594a013-5bf6-4739-bf62-803d874a2dc5/v5
ef:activity/change/20260820T1812399309960000/219091 unit_iri ef:agent/unit_normalization ef:flow/f594a013-5bf6-4739-bf62-803d874a2dc5/v5 ef:flow/f594a013-5bf6-4739-bf62-803d874a2dc5/v6
ef:activity/change/20260820T1812399309960000/243630 properties ef:agent/enrich_references ef:flow/f594a013-5bf6-4739-bf62-803d874a2dc5/v6 ef:flow/f594a013-5bf6-4739-bf62-803d874a2dc5/v7
ef:activity/change/20260820T1812399309960000/243631 skos_definition ef:agent/enrich_references ef:flow/f594a013-5bf6-4739-bf62-803d874a2dc5/v7 ef:flow/f594a013-5bf6-4739-bf62-803d874a2dc5/v8
ef:activity/change/20260820T1812399309960000/243632 references ef:agent/enrich_references ef:flow/f594a013-5bf6-4739-bf62-803d874a2dc5/v8 ef:flow/f594a013-5bf6-4739-bf62-803d874a2dc5/v9
ef:activity/change/20260820T1812399309960000/256688 altLabel ef:agent/chebi_altlabels ef:flow/f594a013-5bf6-4739-bf62-803d874a2dc5/v9 ef:flow/f594a013-5bf6-4739-bf62-803d874a2dc5/v10
ef:activity/change/20260820T1812399309960000/258594 altLabel ef:agent/consensus_match ef:flow/f594a013-5bf6-4739-bf62-803d874a2dc5/v10 ef:flow/f594a013-5bf6-4739-bf62-803d874a2dc5/v11
ef:activity/change/20260820T1812399309960000/258595 cas_match_labels ef:agent/consensus_match ef:flow/f594a013-5bf6-4739-bf62-803d874a2dc5/v11 ef:flow/f594a013-5bf6-4739-bf62-803d874a2dc5/v12
ef:activity/change/20260820T1812399309960000/278256 properties ef:agent/opsin_iupac ef:flow/f594a013-5bf6-4739-bf62-803d874a2dc5/v12 ef:flow/f594a013-5bf6-4739-bf62-803d874a2dc5/v13
ef:activity/change/20260820T1812399309960000/285002 properties ef:agent/rdkit_post_consensus ef:flow/f594a013-5bf6-4739-bf62-803d874a2dc5/v13 ef:flow/f594a013-5bf6-4739-bf62-803d874a2dc5/v14
ef:activity/change/20260820T1812399309960000/290796 altLabel ef:agent/strip_catalogue_altlabels ef:flow/f594a013-5bf6-4739-bf62-803d874a2dc5/v14 ef:flow/f594a013-5bf6-4739-bf62-803d874a2dc5/v15
ef:activity/change/20260820T1812399309960000/379716 concept_associations ef:agent/carry_associations_onto_flows ef:flow/f594a013-5bf6-4739-bf62-803d874a2dc5/v15 ef:flow/f594a013-5bf6-4739-bf62-803d874a2dc5/v16
ef:activity/change/20260820T1812399309960000/392607 properties ef:agent/normalise_property_values ef:flow/f594a013-5bf6-4739-bf62-803d874a2dc5/v16 ef:flow/f594a013-5bf6-4739-bf62-803d874a2dc5/v17
ef:activity/change/20260820T1812399309960000/401165 types ef:agent/link_flows_to_their_substance ef:flow/f594a013-5bf6-4739-bf62-803d874a2dc5/v17 ef:flow/f594a013-5bf6-4739-bf62-803d874a2dc5/v18

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