Consensus flow list

By field

12 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 2 catalogue altLabel value(s): 'NSC 81726' (registry code), 'PS 1002' (grade code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=boricacid||dimension=Environmental > media=Water > water_body=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'10043-35-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-51d13e8dc9394fe9: {'10043-35-3': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['10043-35-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_33118']; candidate_pubchem_cids=[7628, 2784667]; selected_pubchem_cids=[7628]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

19
# Step Field From To Why
23,625 bootstrap_labels prefLabel [{"@value":"Boric acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… Bootstrapped prefLabel from legacy name field
23,626 bootstrap_labels name Boric acid Purged legacy name field to enforce prefLabel usage
197,868 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Ground level","population_density":"Urban (>1000 people/square mil… Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground
197,869 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-grle-ur10pesq Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground
220,583 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
226,349 normalize_name_case prefLabel [{"@value":"Boric acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… [{"@value":"Boric Acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
247,736 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["BH3O3","H3… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
247,737 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
247,738 enrich_references references [] [{"@id":"bpdb:2136","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"consens… Added references with provenance; cas_numbers=['10043-35-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_33118']; candidate_pubchem_cids=[7628, 2784667]; selected_pubchem_cids=[7628]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
254,253 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["BH3O3","H3… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["BH3O3","H3… rdkit_pre_consensus from 'B(O)(O)O'; added: monoisotopic_mass
257,284 chebi_altlabels altLabel [] [{"@value":"B(OH)3","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensu… Added 6 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
264,449 consensus_match altLabel [{"@value":"B(OH)3","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensu… [{"@value":"B(OH)3","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensu… group_key=boricacid||dimension=Environmental > media=Water > water_body=Unknown; cas=10043-35-3; added Common Chemistry CAS names as altLabel: Basilit B, BorActin, Boracic acid, Boric acid (B(OH)<sub>3</sub>), Boric acid (H<sub>3</sub>BO<sub>3</sub>), Borofax, Boron hydroxide (B(OH)<sub>3</sub>), Bushwhacker, CB BORiD, Dia Flea-Mate, Dr.′s 1 Flea Terminator DF, Dr.′s 1 Flea Terminator DFPBO, Dr.′s 1 Flea Terminator DT, Dr.′s 1 Flea Terminator DTPBO, Entimaden, Flea Prufe, NSC 81726, Niban, Niban Granular Bait, Niban-FG, Nitrate balancer, Optibor, Optibor TP, Orthoboric acid (B(OH)<sub>3</sub>), Orthoboric acid (H<sub>3</sub>BO<sub>3</sub>), PS 1002, Roach Away, Roach Prufe, Super Flea Eliminator, Trihydroxyborane; object_uuid=fo-51d13e8dc9394fe9
264,450 consensus_match cas_match_labels {"10043-35-3":"exactMatch"} group_key=boricacid||dimension=Environmental > media=Water > water_body=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'10043-35-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-51d13e8dc9394fe9: {'10043-35-3': 'exactMatch'}
279,496 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["BH3O3","H3… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["BH3O3","H3… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Boric Acid'
286,374 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["BH3O3","H3… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["BH3O3","H3… rdkit_post_consensus from 'OB(O)O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
291,718 strip_catalogue_altlabels altLabel [{"@value":"B(OH)3","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensu… [{"@value":"B(OH)3","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensu… Removed 2 catalogue altLabel value(s): 'NSC 81726' (registry code), 'PS 1002' (grade code)
379,990 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/f66e5500-77f8-… associations resolved on the elementary layer
393,893 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["BH3O3","H3… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["BH3O3","H3… typed the way the ontology types it
403,099 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

19 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T1555490862250000/23625 prefLabel ef:agent/bootstrap_labels ef:flow/f66e5500-77f8-468a-973c-54248ef0b40c/v0 ef:flow/f66e5500-77f8-468a-973c-54248ef0b40c/v1
ef:activity/change/20260820T1555490862250000/23626 name ef:agent/bootstrap_labels ef:flow/f66e5500-77f8-468a-973c-54248ef0b40c/v1 ef:flow/f66e5500-77f8-468a-973c-54248ef0b40c/v2
ef:activity/change/20260820T1555490862250000/197868 context ef:agent/default_context_mapping ef:flow/f66e5500-77f8-468a-973c-54248ef0b40c/v2 ef:flow/f66e5500-77f8-468a-973c-54248ef0b40c/v3
ef:activity/change/20260820T1555490862250000/197869 context_iri ef:agent/default_context_mapping ef:flow/f66e5500-77f8-468a-973c-54248ef0b40c/v3 ef:flow/f66e5500-77f8-468a-973c-54248ef0b40c/v4
ef:activity/change/20260820T1555490862250000/220583 unit_iri ef:agent/unit_normalization ef:flow/f66e5500-77f8-468a-973c-54248ef0b40c/v4 ef:flow/f66e5500-77f8-468a-973c-54248ef0b40c/v5
ef:activity/change/20260820T1555490862250000/226349 prefLabel ef:agent/normalize_name_case ef:flow/f66e5500-77f8-468a-973c-54248ef0b40c/v5 ef:flow/f66e5500-77f8-468a-973c-54248ef0b40c/v6
ef:activity/change/20260820T1555490862250000/247736 properties ef:agent/enrich_references ef:flow/f66e5500-77f8-468a-973c-54248ef0b40c/v6 ef:flow/f66e5500-77f8-468a-973c-54248ef0b40c/v7
ef:activity/change/20260820T1555490862250000/247737 skos_definition ef:agent/enrich_references ef:flow/f66e5500-77f8-468a-973c-54248ef0b40c/v7 ef:flow/f66e5500-77f8-468a-973c-54248ef0b40c/v8
ef:activity/change/20260820T1555490862250000/247738 references ef:agent/enrich_references ef:flow/f66e5500-77f8-468a-973c-54248ef0b40c/v8 ef:flow/f66e5500-77f8-468a-973c-54248ef0b40c/v9
ef:activity/change/20260820T1555490862250000/254253 properties ef:agent/rdkit_pre_consensus ef:flow/f66e5500-77f8-468a-973c-54248ef0b40c/v9 ef:flow/f66e5500-77f8-468a-973c-54248ef0b40c/v10
ef:activity/change/20260820T1555490862250000/257284 altLabel ef:agent/chebi_altlabels ef:flow/f66e5500-77f8-468a-973c-54248ef0b40c/v10 ef:flow/f66e5500-77f8-468a-973c-54248ef0b40c/v11
ef:activity/change/20260820T1555490862250000/264449 altLabel ef:agent/consensus_match ef:flow/f66e5500-77f8-468a-973c-54248ef0b40c/v11 ef:flow/f66e5500-77f8-468a-973c-54248ef0b40c/v12
ef:activity/change/20260820T1555490862250000/264450 cas_match_labels ef:agent/consensus_match ef:flow/f66e5500-77f8-468a-973c-54248ef0b40c/v12 ef:flow/f66e5500-77f8-468a-973c-54248ef0b40c/v13
ef:activity/change/20260820T1555490862250000/279496 properties ef:agent/opsin_iupac ef:flow/f66e5500-77f8-468a-973c-54248ef0b40c/v13 ef:flow/f66e5500-77f8-468a-973c-54248ef0b40c/v14
ef:activity/change/20260820T1555490862250000/286374 properties ef:agent/rdkit_post_consensus ef:flow/f66e5500-77f8-468a-973c-54248ef0b40c/v14 ef:flow/f66e5500-77f8-468a-973c-54248ef0b40c/v15
ef:activity/change/20260820T1555490862250000/291718 altLabel ef:agent/strip_catalogue_altlabels ef:flow/f66e5500-77f8-468a-973c-54248ef0b40c/v15 ef:flow/f66e5500-77f8-468a-973c-54248ef0b40c/v16
ef:activity/change/20260820T1555490862250000/379990 concept_associations ef:agent/carry_associations_onto_flows ef:flow/f66e5500-77f8-468a-973c-54248ef0b40c/v16 ef:flow/f66e5500-77f8-468a-973c-54248ef0b40c/v17
ef:activity/change/20260820T1555490862250000/393893 properties ef:agent/normalise_property_values ef:flow/f66e5500-77f8-468a-973c-54248ef0b40c/v17 ef:flow/f66e5500-77f8-468a-973c-54248ef0b40c/v18
ef:activity/change/20260820T1555490862250000/403099 types ef:agent/link_flows_to_their_substance ef:flow/f66e5500-77f8-468a-973c-54248ef0b40c/v18 ef:flow/f66e5500-77f8-468a-973c-54248ef0b40c/v19

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