Cis-hex-3-en-1-ol
Everything that changed this flow. Back to the flow
f7c2b2ff-9d3e-40a5-9110-d8abc7743912
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 6 | enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | the substance's answer, copied onto its flow |
| altLabel | 3 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 1 catalogue altLabel value(s): 'ENT 25091' (grade code) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=cis-hex-3-en-1-ol||dimension=Environmental > media=Ground > geography=Non-agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'928-96-1': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-92b2b51fd0d3babf: {'928-96-1': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['928-96-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_28857']; candidate_pubchem_cids=[10993, 5281167, 5284503, 77519713]; selected_pubchem_cids=[5281167]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
21| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 16,890 | bootstrap_labels | prefLabel | — | [{"@value":"cis-hex-3-en-1-ol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedT… | Bootstrapped prefLabel from legacy name field |
| 16,891 | bootstrap_labels | name | cis-hex-3-en-1-ol | — | Purged legacy name field to enforce prefLabel usage |
| 16,892 | bootstrap_labels | synonyms | ["(3Z)-3-Hexen-1-ol","(3Z)-hex-3-en-1-ol","(3Z)-hex-3-en-ol","(Z)-3-HEXENOL","(Z)-3-Hexen-1-ol","(Z)-Hex-3-en-1-ol",".b… | [] | Removed legacy synonyms field in favor of structured labels |
| 198,623 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Ground","geography":"Agricultural"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil |
| 198,624 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-grou-agri | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil |
| 218,883 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 224,959 | normalize_name_case | prefLabel | [{"@value":"cis-hex-3-en-1-ol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedT… | [{"@value":"Cis-hex-3-en-1-ol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedT… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 243,055 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H12O"],"… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 243,056 | enrich_references | skos_definition | — | [{"@value":"A hex-3-en-1-ol in which the double bond adopts a Z-configuration. Also known as leaf alcohol, it is emitte… | Merged ChEBI/PubChem definitions into skos:definition |
| 243,057 | enrich_references | references | [] | [{"@id":"agr:IND43625196","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"b… | Added references with provenance; cas_numbers=['928-96-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_28857']; candidate_pubchem_cids=[10993, 5281167, 5284503, 77519713]; selected_pubchem_cids=[5281167]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 252,896 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H12O"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H12O"],"… | rdkit_pre_consensus from 'CC/C=CCCO'; added: inchi2d_string, monoisotopic_mass |
| 256,619 | chebi_altlabels | altLabel | [] | [{"@value":"(3Z)-3-Hexen-1-ol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo… | Added 7 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 265,210 | consensus_match | altLabel | [{"@value":"(3Z)-3-Hexen-1-ol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo… | [{"@value":"(3Z)-3-Hexen-1-ol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo… | group_key=cis-hex-3-en-1-ol||dimension=Environmental > media=Ground > geography=Non-agricultural; cas=928-96-1; added Common Chemistry CAS names as altLabel: (3<em>Z</em>)-Hexenol, (<em>Z</em>)-3-Hexenol, (<em>Z</em>)-Hex-3-en-1-ol, 3-Hexen-1-ol, (3<em>Z</em>)-, 3-Hexen-1-ol, <em>cis</em>-, 3<em>Z</em>-Hexen-1-ol, <em>cis</em>-1-Hydroxy-3-hexene, <em>cis</em>-3-Hexene-1-ol, <em>cis</em>-3-Hexenol, <em>cis</em>-3-Hexenyl alcohol, Blaetteralkohol, ENT 25091, Folic alcohol, Green leaf alcohol; object_uuid=fo-92b2b51fd0d3babf |
| 265,211 | consensus_match | cas_match_labels | — | {"928-96-1":"exactMatch"} | group_key=cis-hex-3-en-1-ol||dimension=Environmental > media=Ground > geography=Non-agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'928-96-1': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-92b2b51fd0d3babf: {'928-96-1': 'exactMatch'} |
| 278,101 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H12O"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H12O"],"… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Cis-hex-3-en-1-ol' |
| 284,836 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H12O"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H12O"],"… | rdkit_post_consensus from 'CC/C=C\\CCO'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 290,701 | strip_catalogue_altlabels | altLabel | [{"@value":"(3Z)-3-Hexen-1-ol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo… | [{"@value":"(3Z)-3-Hexen-1-ol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo… | Removed 1 catalogue altLabel value(s): 'ENT 25091' (grade code) |
| 380,377 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/f7c2b2ff-9d3e-… | associations resolved on the elementary layer |
| 392,480 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H12O"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H12O"],"… | typed the way the ontology types it |
| 400,954 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
| 400,955 | link_flows_to_their_substance | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H12O"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H12O"],"… | the substance's answer, copied onto its flow |
PROV-O trail
21 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20261019T0712047113160000/16890 | prefLabel | ef:agent/bootstrap_labels | ef:flow/f7c2b2ff-9d3e-40a5-9110-d8abc7743912/v0 | ef:flow/f7c2b2ff-9d3e-40a5-9110-d8abc7743912/v1 |
| ef:activity/change/20261019T0712047113160000/16891 | name | ef:agent/bootstrap_labels | ef:flow/f7c2b2ff-9d3e-40a5-9110-d8abc7743912/v1 | ef:flow/f7c2b2ff-9d3e-40a5-9110-d8abc7743912/v2 |
| ef:activity/change/20261019T0712047113160000/16892 | synonyms | ef:agent/bootstrap_labels | ef:flow/f7c2b2ff-9d3e-40a5-9110-d8abc7743912/v2 | ef:flow/f7c2b2ff-9d3e-40a5-9110-d8abc7743912/v3 |
| ef:activity/change/20261019T0712047113160000/198623 | context | ef:agent/default_context_mapping | ef:flow/f7c2b2ff-9d3e-40a5-9110-d8abc7743912/v3 | ef:flow/f7c2b2ff-9d3e-40a5-9110-d8abc7743912/v4 |
| ef:activity/change/20261019T0712047113160000/198624 | context_iri | ef:agent/default_context_mapping | ef:flow/f7c2b2ff-9d3e-40a5-9110-d8abc7743912/v4 | ef:flow/f7c2b2ff-9d3e-40a5-9110-d8abc7743912/v5 |
| ef:activity/change/20261019T0712047113160000/218883 | unit_iri | ef:agent/unit_normalization | ef:flow/f7c2b2ff-9d3e-40a5-9110-d8abc7743912/v5 | ef:flow/f7c2b2ff-9d3e-40a5-9110-d8abc7743912/v6 |
| ef:activity/change/20261019T0712047113160000/224959 | prefLabel | ef:agent/normalize_name_case | ef:flow/f7c2b2ff-9d3e-40a5-9110-d8abc7743912/v6 | ef:flow/f7c2b2ff-9d3e-40a5-9110-d8abc7743912/v7 |
| ef:activity/change/20261019T0712047113160000/243055 | properties | ef:agent/enrich_references | ef:flow/f7c2b2ff-9d3e-40a5-9110-d8abc7743912/v7 | ef:flow/f7c2b2ff-9d3e-40a5-9110-d8abc7743912/v8 |
| ef:activity/change/20261019T0712047113160000/243056 | skos_definition | ef:agent/enrich_references | ef:flow/f7c2b2ff-9d3e-40a5-9110-d8abc7743912/v8 | ef:flow/f7c2b2ff-9d3e-40a5-9110-d8abc7743912/v9 |
| ef:activity/change/20261019T0712047113160000/243057 | references | ef:agent/enrich_references | ef:flow/f7c2b2ff-9d3e-40a5-9110-d8abc7743912/v9 | ef:flow/f7c2b2ff-9d3e-40a5-9110-d8abc7743912/v10 |
| ef:activity/change/20261019T0712047113160000/252896 | properties | ef:agent/rdkit_pre_consensus | ef:flow/f7c2b2ff-9d3e-40a5-9110-d8abc7743912/v10 | ef:flow/f7c2b2ff-9d3e-40a5-9110-d8abc7743912/v11 |
| ef:activity/change/20261019T0712047113160000/256619 | altLabel | ef:agent/chebi_altlabels | ef:flow/f7c2b2ff-9d3e-40a5-9110-d8abc7743912/v11 | ef:flow/f7c2b2ff-9d3e-40a5-9110-d8abc7743912/v12 |
| ef:activity/change/20261019T0712047113160000/265210 | altLabel | ef:agent/consensus_match | ef:flow/f7c2b2ff-9d3e-40a5-9110-d8abc7743912/v12 | ef:flow/f7c2b2ff-9d3e-40a5-9110-d8abc7743912/v13 |
| ef:activity/change/20261019T0712047113160000/265211 | cas_match_labels | ef:agent/consensus_match | ef:flow/f7c2b2ff-9d3e-40a5-9110-d8abc7743912/v13 | ef:flow/f7c2b2ff-9d3e-40a5-9110-d8abc7743912/v14 |
| ef:activity/change/20261019T0712047113160000/278101 | properties | ef:agent/opsin_iupac | ef:flow/f7c2b2ff-9d3e-40a5-9110-d8abc7743912/v14 | ef:flow/f7c2b2ff-9d3e-40a5-9110-d8abc7743912/v15 |
| ef:activity/change/20261019T0712047113160000/284836 | properties | ef:agent/rdkit_post_consensus | ef:flow/f7c2b2ff-9d3e-40a5-9110-d8abc7743912/v15 | ef:flow/f7c2b2ff-9d3e-40a5-9110-d8abc7743912/v16 |
| ef:activity/change/20261019T0712047113160000/290701 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/f7c2b2ff-9d3e-40a5-9110-d8abc7743912/v16 | ef:flow/f7c2b2ff-9d3e-40a5-9110-d8abc7743912/v17 |
| ef:activity/change/20261019T0712047113160000/380377 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/f7c2b2ff-9d3e-40a5-9110-d8abc7743912/v17 | ef:flow/f7c2b2ff-9d3e-40a5-9110-d8abc7743912/v18 |
| ef:activity/change/20261019T0712047113160000/392480 | properties | ef:agent/normalise_property_values | ef:flow/f7c2b2ff-9d3e-40a5-9110-d8abc7743912/v18 | ef:flow/f7c2b2ff-9d3e-40a5-9110-d8abc7743912/v19 |
| ef:activity/change/20261019T0712047113160000/400954 | types | ef:agent/link_flows_to_their_substance | ef:flow/f7c2b2ff-9d3e-40a5-9110-d8abc7743912/v19 | ef:flow/f7c2b2ff-9d3e-40a5-9110-d8abc7743912/v20 |
| ef:activity/change/20261019T0712047113160000/400955 | properties | ef:agent/link_flows_to_their_substance | ef:flow/f7c2b2ff-9d3e-40a5-9110-d8abc7743912/v20 | ef:flow/f7c2b2ff-9d3e-40a5-9110-d8abc7743912/v21 |