Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 3 catalogue altLabel value(s): 'NSC 379586' (registry code), 'OMS 771' (grade code), 'UC 21149' (grade code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=aldicarb||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'116-06-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-5bc0a2139ad90db7: {'116-06-3': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['116-06-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_2555']; candidate_pubchem_cids=[2086, 184572, 5353395, 9570071]; selected_pubchem_cids=[]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
roles 1 link_flows_to_their_substance the substance's answer, copied onto its flow
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

21
# Step Field From To Why
7,045 bootstrap_labels prefLabel [{"@value":"aldicarb","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… Bootstrapped prefLabel from legacy name field
7,046 bootstrap_labels name aldicarb Purged legacy name field to enforce prefLabel usage
25,795 bootstrap_labels synonyms ["2-methyl-2-(methylthio)propanal-o-(n-methylcarbamoyl)oxime","aldicarb","aldicarb(iso)","(e)-[2-methyl-2-(methylsulfan… [] Removed legacy synonyms field in favor of structured labels
199,722 default_context_mapping context {"dimension":"Environmental","media":"Air","indoor":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
199,723 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-indr-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
215,697 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
222,714 normalize_name_case prefLabel [{"@value":"aldicarb","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… [{"@value":"Aldicarb","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
233,944 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H14N2O2S… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=0, commonchemistry_cas=['116-06-3'])
233,945 enrich_references skos_definition [{"@value":"The oxime carbamate resulting from the addition of 2-methyl-2-(methylsulfanyl)propanaldoxime to methyl isoc… Merged ChEBI/PubChem definitions into skos:definition
233,946 enrich_references references [] [{"@id":"beilstein:2046931","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":… Added references with provenance; cas_numbers=['116-06-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_2555']; candidate_pubchem_cids=[2086, 184572, 5353395, 9570071]; selected_pubchem_cids=[]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
250,273 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H14N2O2S… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H14N2O2S… rdkit_pre_consensus from '[H]C(=NOC(=O)NC)C(C)(C)SC'; added: monoisotopic_mass
255,271 chebi_altlabels altLabel [] [{"@value":"2-Methyl-2-(methylthio)propanal, O-((methylamino)carbonyl)oxime","@language":"en","source":{"prov:wasGenera… Added 5 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
263,637 consensus_match altLabel [{"@value":"2-Methyl-2-(methylthio)propanal, O-((methylamino)carbonyl)oxime","@language":"en","source":{"prov:wasGenera… [{"@value":"2-Methyl-2-(methylthio)propanal, O-((methylamino)carbonyl)oxime","@language":"en","source":{"prov:wasGenera… group_key=aldicarb||dimension=Environmental > media=Ground > geography=Agricultural; cas=116-06-3; added Common Chemistry CAS names as altLabel: 2-Methyl-2-(methylthio)propanal <em>O</em>-(<em>N</em>-methylcarbamoyl)oxime, MeSH ID: D000448, NSC 379586, OMS 771, Propanal, 2-methyl-2-(methylthio)-, <em>O</em>-[(methylamino)carbonyl]oxime, Propionaldehyde, 2-methyl-2-(methylthio)-, <em>O</em>-(methylcarbamoyl)oxime, Temik, Temik 10G, Temik G 10, UC 21149; object_uuid=fo-5bc0a2139ad90db7
263,638 consensus_match cas_match_labels {"116-06-3":"exactMatch"} group_key=aldicarb||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'116-06-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-5bc0a2139ad90db7: {'116-06-3': 'exactMatch'}
275,431 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H14N2O2S… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H14N2O2S… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '2-Methyl-2-(methylthio)propanal, O-((methylamino)carbonyl)oxime'
281,944 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H14N2O2S… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H14N2O2S… rdkit_post_consensus from 'CNC(=O)ON=CC(C)(C)SC'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
288,716 strip_catalogue_altlabels altLabel [{"@value":"2-Methyl-2-(methylthio)propanal, O-((methylamino)carbonyl)oxime","@language":"en","source":{"prov:wasGenera… [{"@value":"2-Methyl-2-(methylthio)propanal, O-((methylamino)carbonyl)oxime","@language":"en","source":{"prov:wasGenera… Removed 3 catalogue altLabel value(s): 'NSC 379586' (registry code), 'OMS 771' (grade code), 'UC 21149' (grade code)
380,914 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/f99fe532-b1e4-… associations resolved on the elementary layer
389,740 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H14N2O2S… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H14N2O2S… typed the way the ontology types it
397,008 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
397,009 link_flows_to_their_substance roles [{"@id":"http://purl.obolibrary.org/obo/CHEBI_22153","rdfs:label":"acaricide","http://www.w3.org/2004/02/skos/core#defi… the substance's answer, copied onto its flow

PROV-O trail

21 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T0738569779880000/7045 prefLabel ef:agent/bootstrap_labels ef:flow/f99fe532-b1e4-4063-96e4-eefaf20f903f/v0 ef:flow/f99fe532-b1e4-4063-96e4-eefaf20f903f/v1
ef:activity/change/20260820T0738569779880000/7046 name ef:agent/bootstrap_labels ef:flow/f99fe532-b1e4-4063-96e4-eefaf20f903f/v1 ef:flow/f99fe532-b1e4-4063-96e4-eefaf20f903f/v2
ef:activity/change/20260820T0738569779880000/25795 synonyms ef:agent/bootstrap_labels ef:flow/f99fe532-b1e4-4063-96e4-eefaf20f903f/v2 ef:flow/f99fe532-b1e4-4063-96e4-eefaf20f903f/v3
ef:activity/change/20260820T0738569779880000/199722 context ef:agent/default_context_mapping ef:flow/f99fe532-b1e4-4063-96e4-eefaf20f903f/v3 ef:flow/f99fe532-b1e4-4063-96e4-eefaf20f903f/v4
ef:activity/change/20260820T0738569779880000/199723 context_iri ef:agent/default_context_mapping ef:flow/f99fe532-b1e4-4063-96e4-eefaf20f903f/v4 ef:flow/f99fe532-b1e4-4063-96e4-eefaf20f903f/v5
ef:activity/change/20260820T0738569779880000/215697 unit_iri ef:agent/unit_normalization ef:flow/f99fe532-b1e4-4063-96e4-eefaf20f903f/v5 ef:flow/f99fe532-b1e4-4063-96e4-eefaf20f903f/v6
ef:activity/change/20260820T0738569779880000/222714 prefLabel ef:agent/normalize_name_case ef:flow/f99fe532-b1e4-4063-96e4-eefaf20f903f/v6 ef:flow/f99fe532-b1e4-4063-96e4-eefaf20f903f/v7
ef:activity/change/20260820T0738569779880000/233944 properties ef:agent/enrich_references ef:flow/f99fe532-b1e4-4063-96e4-eefaf20f903f/v7 ef:flow/f99fe532-b1e4-4063-96e4-eefaf20f903f/v8
ef:activity/change/20260820T0738569779880000/233945 skos_definition ef:agent/enrich_references ef:flow/f99fe532-b1e4-4063-96e4-eefaf20f903f/v8 ef:flow/f99fe532-b1e4-4063-96e4-eefaf20f903f/v9
ef:activity/change/20260820T0738569779880000/233946 references ef:agent/enrich_references ef:flow/f99fe532-b1e4-4063-96e4-eefaf20f903f/v9 ef:flow/f99fe532-b1e4-4063-96e4-eefaf20f903f/v10
ef:activity/change/20260820T0738569779880000/250273 properties ef:agent/rdkit_pre_consensus ef:flow/f99fe532-b1e4-4063-96e4-eefaf20f903f/v10 ef:flow/f99fe532-b1e4-4063-96e4-eefaf20f903f/v11
ef:activity/change/20260820T0738569779880000/255271 altLabel ef:agent/chebi_altlabels ef:flow/f99fe532-b1e4-4063-96e4-eefaf20f903f/v11 ef:flow/f99fe532-b1e4-4063-96e4-eefaf20f903f/v12
ef:activity/change/20260820T0738569779880000/263637 altLabel ef:agent/consensus_match ef:flow/f99fe532-b1e4-4063-96e4-eefaf20f903f/v12 ef:flow/f99fe532-b1e4-4063-96e4-eefaf20f903f/v13
ef:activity/change/20260820T0738569779880000/263638 cas_match_labels ef:agent/consensus_match ef:flow/f99fe532-b1e4-4063-96e4-eefaf20f903f/v13 ef:flow/f99fe532-b1e4-4063-96e4-eefaf20f903f/v14
ef:activity/change/20260820T0738569779880000/275431 properties ef:agent/opsin_iupac ef:flow/f99fe532-b1e4-4063-96e4-eefaf20f903f/v14 ef:flow/f99fe532-b1e4-4063-96e4-eefaf20f903f/v15
ef:activity/change/20260820T0738569779880000/281944 properties ef:agent/rdkit_post_consensus ef:flow/f99fe532-b1e4-4063-96e4-eefaf20f903f/v15 ef:flow/f99fe532-b1e4-4063-96e4-eefaf20f903f/v16
ef:activity/change/20260820T0738569779880000/288716 altLabel ef:agent/strip_catalogue_altlabels ef:flow/f99fe532-b1e4-4063-96e4-eefaf20f903f/v16 ef:flow/f99fe532-b1e4-4063-96e4-eefaf20f903f/v17
ef:activity/change/20260820T0738569779880000/380914 concept_associations ef:agent/carry_associations_onto_flows ef:flow/f99fe532-b1e4-4063-96e4-eefaf20f903f/v17 ef:flow/f99fe532-b1e4-4063-96e4-eefaf20f903f/v18
ef:activity/change/20260820T0738569779880000/389740 properties ef:agent/normalise_property_values ef:flow/f99fe532-b1e4-4063-96e4-eefaf20f903f/v18 ef:flow/f99fe532-b1e4-4063-96e4-eefaf20f903f/v19
ef:activity/change/20260820T0738569779880000/397008 types ef:agent/link_flows_to_their_substance ef:flow/f99fe532-b1e4-4063-96e4-eefaf20f903f/v19 ef:flow/f99fe532-b1e4-4063-96e4-eefaf20f903f/v20
ef:activity/change/20260820T0738569779880000/397009 roles ef:agent/link_flows_to_their_substance ef:flow/f99fe532-b1e4-4063-96e4-eefaf20f903f/v20 ef:flow/f99fe532-b1e4-4063-96e4-eefaf20f903f/v21

Keyboard

?
Show or hide this map
Esc
Close

More as the sections are built.