Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 6 enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus the substance's answer, copied onto its flow
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 2 catalogue altLabel value(s): 'NSC 9563' (registry code), 'SKF 2170' (grade code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=androst-4-ene-3,17-dione||dimension=Environmental > media=Air > strata=Medium stack, <150 meters > population_density=Rural (<1000 people/square mile); group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'63-05-8': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-7c6665ee1e6b2e6b: {'63-05-8': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['63-05-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_16422']; candidate_pubchem_cids=[2193, 6128, 249335, 6432604, 7059480, 57366955]; selected_pubchem_cids=[6128]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

21
# Step Field From To Why
10,046 bootstrap_labels prefLabel [{"@value":"androst-4-ene-3,17-dione","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttr… Bootstrapped prefLabel from legacy name field
10,047 bootstrap_labels name androst-4-ene-3,17-dione Purged legacy name field to enforce prefLabel usage
10,048 bootstrap_labels synonyms ["(8R,9S,10R,13S,14S)-10,13-dimethyl-2,6,7,8,9,11,12,14,15,16-decahydro-1H-cyclopenta[a]phenanthrene-3,17-dione",".DELT… [] Removed legacy synonyms field in favor of structured labels
199,784 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Ocean"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
199,785 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-ocea Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
216,676 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
223,445 normalize_name_case prefLabel [{"@value":"androst-4-ene-3,17-dione","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttr… [{"@value":"Androst-4-ene-3,17-dione","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttr… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
236,774 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C19H26O2"]… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
236,775 enrich_references skos_definition [{"@value":"A 3-oxo Δ4-steroid that is androst-4-ene substituted by oxo groups at positions 3 and 17. It is a steroid h… Merged ChEBI/PubChem definitions into skos:definition
236,776 enrich_references references [] [{"@id":"drugcentral:215","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"c… Added references with provenance; cas_numbers=['63-05-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_16422']; candidate_pubchem_cids=[2193, 6128, 249335, 6432604, 7059480, 57366955]; selected_pubchem_cids=[6128]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
251,076 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C19H26O2"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C19H26O2"]… rdkit_pre_consensus from 'CC12CCC(=O)C=C1CCC3C2CCC4(C3CCC4=O)C'; added: inchi2d_string
255,811 chebi_altlabels altLabel [] [{"@value":"4-ANDROSTENE-3-17-DIONE","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttrib… Added 5 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
263,871 consensus_match altLabel [{"@value":"4-ANDROSTENE-3-17-DIONE","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttrib… [{"@value":"4-ANDROSTENE-3-17-DIONE","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttrib… group_key=androst-4-ene-3,17-dione||dimension=Environmental > media=Air > strata=Medium stack, <150 meters > population_density=Rural (<1000 people/square mile); cas=63-05-8; added Common Chemistry CAS names as altLabel: 17-Ketotestosterone, 3,17-Dioxoandrost-4-ene, Fecundin, NSC 9563, SKF 2170, Δ<sup>4</sup>-Androstene-3,17-dione; object_uuid=fo-7c6665ee1e6b2e6b
263,872 consensus_match cas_match_labels {"63-05-8":"exactMatch"} group_key=androst-4-ene-3,17-dione||dimension=Environmental > media=Air > strata=Medium stack, <150 meters > population_density=Rural (<1000 people/square mile); group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'63-05-8': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-7c6665ee1e6b2e6b: {'63-05-8': 'exactMatch'}
276,260 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C19H26O2"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C19H26O2"]… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Androst-4-ene-3,17-dione'
282,850 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C19H26O2"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C19H26O2"]… rdkit_post_consensus from 'C[C@]12CCC(=O)C=C1CC[C@@H]1[C@@H]2CC[C@]2(C)C(=O)CC[C@@H]12'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
289,353 strip_catalogue_altlabels altLabel [{"@value":"4-ANDROSTENE-3-17-DIONE","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttrib… [{"@value":"4-ANDROSTENE-3-17-DIONE","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttrib… Removed 2 catalogue altLabel value(s): 'NSC 9563' (registry code), 'SKF 2170' (grade code)
380,925 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/f9c0b30d-18c9-… associations resolved on the elementary layer
390,607 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C19H26O2"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C19H26O2"]… typed the way the ontology types it
398,284 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
398,285 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C19H26O2"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C19H26O2"]… the substance's answer, copied onto its flow

PROV-O trail

21 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T1554374006150000/10046 prefLabel ef:agent/bootstrap_labels ef:flow/f9c0b30d-18c9-4f77-8e94-cd414e27ef06/v0 ef:flow/f9c0b30d-18c9-4f77-8e94-cd414e27ef06/v1
ef:activity/change/20260821T1554374006150000/10047 name ef:agent/bootstrap_labels ef:flow/f9c0b30d-18c9-4f77-8e94-cd414e27ef06/v1 ef:flow/f9c0b30d-18c9-4f77-8e94-cd414e27ef06/v2
ef:activity/change/20260821T1554374006150000/10048 synonyms ef:agent/bootstrap_labels ef:flow/f9c0b30d-18c9-4f77-8e94-cd414e27ef06/v2 ef:flow/f9c0b30d-18c9-4f77-8e94-cd414e27ef06/v3
ef:activity/change/20260821T1554374006150000/199784 context ef:agent/default_context_mapping ef:flow/f9c0b30d-18c9-4f77-8e94-cd414e27ef06/v3 ef:flow/f9c0b30d-18c9-4f77-8e94-cd414e27ef06/v4
ef:activity/change/20260821T1554374006150000/199785 context_iri ef:agent/default_context_mapping ef:flow/f9c0b30d-18c9-4f77-8e94-cd414e27ef06/v4 ef:flow/f9c0b30d-18c9-4f77-8e94-cd414e27ef06/v5
ef:activity/change/20260821T1554374006150000/216676 unit_iri ef:agent/unit_normalization ef:flow/f9c0b30d-18c9-4f77-8e94-cd414e27ef06/v5 ef:flow/f9c0b30d-18c9-4f77-8e94-cd414e27ef06/v6
ef:activity/change/20260821T1554374006150000/223445 prefLabel ef:agent/normalize_name_case ef:flow/f9c0b30d-18c9-4f77-8e94-cd414e27ef06/v6 ef:flow/f9c0b30d-18c9-4f77-8e94-cd414e27ef06/v7
ef:activity/change/20260821T1554374006150000/236774 properties ef:agent/enrich_references ef:flow/f9c0b30d-18c9-4f77-8e94-cd414e27ef06/v7 ef:flow/f9c0b30d-18c9-4f77-8e94-cd414e27ef06/v8
ef:activity/change/20260821T1554374006150000/236775 skos_definition ef:agent/enrich_references ef:flow/f9c0b30d-18c9-4f77-8e94-cd414e27ef06/v8 ef:flow/f9c0b30d-18c9-4f77-8e94-cd414e27ef06/v9
ef:activity/change/20260821T1554374006150000/236776 references ef:agent/enrich_references ef:flow/f9c0b30d-18c9-4f77-8e94-cd414e27ef06/v9 ef:flow/f9c0b30d-18c9-4f77-8e94-cd414e27ef06/v10
ef:activity/change/20260821T1554374006150000/251076 properties ef:agent/rdkit_pre_consensus ef:flow/f9c0b30d-18c9-4f77-8e94-cd414e27ef06/v10 ef:flow/f9c0b30d-18c9-4f77-8e94-cd414e27ef06/v11
ef:activity/change/20260821T1554374006150000/255811 altLabel ef:agent/chebi_altlabels ef:flow/f9c0b30d-18c9-4f77-8e94-cd414e27ef06/v11 ef:flow/f9c0b30d-18c9-4f77-8e94-cd414e27ef06/v12
ef:activity/change/20260821T1554374006150000/263871 altLabel ef:agent/consensus_match ef:flow/f9c0b30d-18c9-4f77-8e94-cd414e27ef06/v12 ef:flow/f9c0b30d-18c9-4f77-8e94-cd414e27ef06/v13
ef:activity/change/20260821T1554374006150000/263872 cas_match_labels ef:agent/consensus_match ef:flow/f9c0b30d-18c9-4f77-8e94-cd414e27ef06/v13 ef:flow/f9c0b30d-18c9-4f77-8e94-cd414e27ef06/v14
ef:activity/change/20260821T1554374006150000/276260 properties ef:agent/opsin_iupac ef:flow/f9c0b30d-18c9-4f77-8e94-cd414e27ef06/v14 ef:flow/f9c0b30d-18c9-4f77-8e94-cd414e27ef06/v15
ef:activity/change/20260821T1554374006150000/282850 properties ef:agent/rdkit_post_consensus ef:flow/f9c0b30d-18c9-4f77-8e94-cd414e27ef06/v15 ef:flow/f9c0b30d-18c9-4f77-8e94-cd414e27ef06/v16
ef:activity/change/20260821T1554374006150000/289353 altLabel ef:agent/strip_catalogue_altlabels ef:flow/f9c0b30d-18c9-4f77-8e94-cd414e27ef06/v16 ef:flow/f9c0b30d-18c9-4f77-8e94-cd414e27ef06/v17
ef:activity/change/20260821T1554374006150000/380925 concept_associations ef:agent/carry_associations_onto_flows ef:flow/f9c0b30d-18c9-4f77-8e94-cd414e27ef06/v17 ef:flow/f9c0b30d-18c9-4f77-8e94-cd414e27ef06/v18
ef:activity/change/20260821T1554374006150000/390607 properties ef:agent/normalise_property_values ef:flow/f9c0b30d-18c9-4f77-8e94-cd414e27ef06/v18 ef:flow/f9c0b30d-18c9-4f77-8e94-cd414e27ef06/v19
ef:activity/change/20260821T1554374006150000/398284 types ef:agent/link_flows_to_their_substance ef:flow/f9c0b30d-18c9-4f77-8e94-cd414e27ef06/v19 ef:flow/f9c0b30d-18c9-4f77-8e94-cd414e27ef06/v20
ef:activity/change/20260821T1554374006150000/398285 properties ef:agent/link_flows_to_their_substance ef:flow/f9c0b30d-18c9-4f77-8e94-cd414e27ef06/v20 ef:flow/f9c0b30d-18c9-4f77-8e94-cd414e27ef06/v21

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